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Properties
| Property Name | Value |
|---|
| Product | cystathionine gamma-synthase |
| Orig transcript id | gnl|cribi|Naga_100535g3.6005.mrna |
| Orig protein id | gnl|cribi|Naga_100535g3.6005 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037253.1 | supercontig | KK037253.1:160932..163237 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9394 ID=rna9394|Name=rna9394|organism=Nannochloropsis gaditana|type=mRNA|length=2202bp
ATGGATGATCGTGTCACGGATGAGGCCCCATCGTCCATGAACGGCTATTT
TCCTCCTCAAGAACCTTCAAAGGCGCAGTCCGCCCGATGCCAGGGCCCAC
CCGCCGCTCCCGTCGACCTCCCCCCTGCGTCCTCCTCTTCCTGCCCCTCC
TCCTCCACCTCCCCTCCCGTCTTTTGCATCGAATGCGAAGATCAGACGGC
AGAGGTCACGTGTCTGGGGTGCGAGGAGGACTTCTGCCGGCCGTGCTGGC
TCTTCCAGCACCGGCGGGGCAAACGGGCCGAGCACCGGGTGCAAGCCTTG
CTGGGAGACGTGATGGCGCCCCCCCAGGTCCCGGCAGAGGAGCGTGAGGG
TGAAGGGGCCGTAGGGACGGGGGAGGCGGGCGGGAGGGAGGACGGGGAGG
AGGAGGCGGTGGCAGACATGATGGTGGGGGAGGAGGAGGGGGAGGAGGAG
GAAGGTCCGGGCTTTGGGGCCGGGGGGGGGTCAGTCAGGGTGGAGGGGCC
GCCGGAGGACACAGCCGTGCCCCCCGACTGGGTGGATCGCTACGAGGAGG
AAGTGTCCCAGGCACAAGCCTTCCTCTGTCGGCCCGCCGCCCAGAAAATG
CTGTGGGATCGGGCGGAGGTGACGCCCTTACGTTTAACGGCCCGGGAACG
GCGATTGCTCGGGGTTTTGGAGTCGGCGCTGAATGTGAGCACGTACACAG
ACCACGTGGACGCGCTGGGACGGCGGGCGACGCGGCAGAGCCGGATGGTG
GAGGAGCTCGAGCGCGTTTTCGCCACCATTCTGGGCCTCATGATTTGCGC
GGACCCCGCCAGGGGGCGGGCCCTGGTCGTGCACCCGATCGCCGAGCACG
GCGACTTTTTCCGGGAAATCTTCGAGGTGGGGCGTCGGTACAAGGTGATG
AACCCGGAGAAGCTCCGGGGGACGCACGGGAAGCTCATGTACATGCTCCA
AGACGCGCAGGGACGATCGCTCCAGGCCCAGATCGGCTTCGGGTCCTGCG
TCAAGCCACTGGCCACGGTGGGCGCCCTGCTCAAGGATCGGGCTCAGGAG
GGCTTCCTACAGGACGCGCGGGTGCTCCTGGCCTCCAGGGACGTGAGTGC
GAGGCGGGGAGAGAGGGGGCGGGCGGAAGCGAGGCGGGAGGCCTGGATGA
AAAGGCGGGCGGCGAGGGAGCTGCAGGTGGAGTGGGGGACGGGTGAATTG
TCCTCGGACGACGTCCAACGCCTCCTGGACTCGATGGCGGACGCGAACAA
CTACCTGAACTTCAATGTCCGGCCCGTGAAACGCGTGCTTCGCCAGCTCC
AAGACAACTTCGCGGTGGACGAGGTGGAGGAGGGCTTCAGTCTGGCCATC
GGGGGGGGGAAGCCGGGCCGTCGCGAAAGCGGGGGCGCCGGGCCCAAGCT
CTCGCACGACCACGCCACGCATTACACATATGTCTGGCAGTCCCTCCGGC
TCTGGCGGGAGGTGATGCAGAGCATGTTCCGTCTCTGGTTCCTGGCCGAC
CAGGACCTGCTCTCCCCCCCGGGGCCTTCCTCCCCTTCCTCCTCCTTCCC
TTCCTATTCGTCTTCCCCCTCCTACACCCTCCTGAACACCGGGCAGGGGC
TGAACCGGGTCCAGGCCTGCCCCGCGGTGGGGGCGGAGATGCGGAGCATA
CTCCAGCGGGTGCAGCGGGAGTGTGGGGCTTGGGTCGGCCTCTCGGTCGT
GCACTTGGGGGACCGGGATGTGCCCAACGCCTTGATGTTCATCGACAAGT
ACACGCAGGTCCCCCGCATCCTCTCCCCCATCGCCAAGGTGATCGAGGAA
TGCCTCCTGGCCTCGGTGTATGGTAAGCGGGAGGAGGAGGAGGAGGAGGG
GGTGCCGGACGAAGACGAGGAAGGCGGCGAGGACGGGGGAGAGGGCGACC
CGGAGGAGGGCGGGAAGCAGCGCGGGAGGAGAGGGATGGGGGCGGACGCT
CTCTACAACCAGGCCCTGGCGGCCTACGCGAAGGACGTGTGGGGGTCCGC
GGGGAATCTGAAGATGCACGTGCTCACGGACTTCTTCCGGCGGGCCTTCG
ACGGGGATGGGGACGACGGGGGCAGTTGCATCGACGGCCGGCTCACCAGT
GCCTGGAACTGGTGCTCCAAAATCGCCAAAAAACCTTACTACCACGCCTT
CTTGCTGGCTGGCTTCACGGGCTTCGACGGAGACTGGGGCCGGGAGGATT
GA back to topprotein sequence of rna9394 >rna9394-protein ID=rna9394-protein|Name=rna9394|organism=Nannochloropsis gaditana|type=polypeptide|length=445bp
MWLGGHDTNLTLPWVFLISYTHMPRRIETILAQAGLHYQDITAVSSRDVI
PPLHLSTTFERGSDGSYPGGFVYARHGNPTRALLEKVMTDLEGGADWSAA
FTCGMQAVTAVFLAFGAQATVLLNQELYQGIRLLLDAPFGSWGLRAQVVD
MTDLGALEVAMARVFADPATARVLLWLETPSNPMLQIIDVRAVIAMAEGQ
ARLHRKDFVSVLDTTWLTPYLLQAVGPLRIDLTLASATKFLGGHSDLLAG
VLTGRRRKLSHATGTTFLDLEAPIRQLQRHAGGNLPPFEAWLLLRGLKSL
PARMRTHCENAHRLAHFFASHPRIAAVHYPGLPSHPGHAVHSAMMSREGL
SGSMMAIQVRARDGEGEDGREEGAEVEAMVLRVVARLRVFRRATSLGGTE
SLCEHRRSVEGAESRTPWDLVRLSVGLEAYEDLEEDWVQALGEEG back to topmRNA from alignment at KK037253.1:160932..163237+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9394 ID=rna9394|Name=rna9394|organism=Nannochloropsis gaditana|type=mRNA|length=2306bp|location=Sequence derived from alignment at KK037253.1:160932..163237+ (Nannochloropsis gaditana)
CTATGACAACGGGCTGTAGACATCTGAAACTGTGAAATCTGGTCGCAGCA
ACTCGAAGCTCGTGAGCTCGCCAAGGCAACGAACACAATGACGTCGCAAG
TTGAAGCGCCTACTTGCATTCCCTAGACCAAGCCTTTATGTGGCTTGGGG
GGCACGACACGAACTTGACGCTTCCTTGGGTCTTTTTGATATCATGTAAG
TATTCACCAGAGACCTCGAGCTCGGTGCGCAATCGGTGTGTCAAGTGCTG
CCTTCACGCGTTGTGACCTCCATCTTTCCCCTCATCATGATTTCTTTTAT
GTATTATTTACGTCGTACCTTATAAACACCCATAGATTGCGCGTCCAATC
ATTGCCGACAAGCGTAAAGCCCTTGAATCTGTCCCCGTCGGATCATTCCT
GTATGATTGACATGCTTTCACTTTTTCACTCTCTTGCCAGACACTCACAT
GCCAAGAAGGATCGAGACTATCCTCGCTCAAGCAGGCTTACACTACCAGG
ACATCACAGCCGTTTCCTCCCGTGACGTGATCCCCCCATTACACCTTTCT
ACCACCTTTGAGAGGGGTAGTGATGGCTCCTATCCCGGGGGCTTTGTCTA
CGCACGGCATGGCAATCCCACCCGGGCCTTGCTGGAAAAAGGTATGCGCC
CATCACAAAGGCCAGGTCTCTAGGACATGAAGCAAAAGCCTGTGCATGGG
GTAAATCCACGATGATATTCGTTTTCTTTGTCTTTATCATAATATTGGTA
TGCATCGTCGTCCCTGAGAGCAAGAATGACCCGTATGAACATGCCAGTCC
GCCCGCTCTCACGCTTCCCGCATGACCTtcacctttcttccctccccatc
acgcGGCAGTCATGACCGACTTGGAAGGCGGCGCCGACTGGTCCGCGGCC
TTCACATGCGGCATGCAGGCCGTGAccgccgtcttcctcgcctttggGGC
CCAGGCCACTGTGCTCCTGAACCAAGAGCTGTATCAGggcatccgcctcc
tcctggacgCCCCCTTCGGCTCCTGGGGGCTCCGTGCGCAGGTGGTGGAC
ATGACGGACCTGGGAGCCTTGGAGGTTGCCATGGCCCGAGTCTTCGCGGA
CCCGGCGACTGCGAGGGTGCTCCTGTGGCTGGAGACCCCCTCCAACCCCA
TGCTACAGGTAGAGAGGCCGCCAAcgaaggggcggggccctatctcccct
ccccaccgtgCCTCCCCCTaactgcctccctcccccctcgcctccccagA
TCATAGACGTCCGGGCGGTCATTGCCATGGCCGAAGGGCAGGCCCGGCTC
CACCGGAAGGACTTCGTCTCGGTGCTGGACACTACCTGGCTCAcgcccta
cctcctccaggccgtcgGCCCCCTCCGCATCGACCTGACCCTCGCCAGCG
CCACCAAATTCCTGGGGGGGCACTCGGACCTGCTGGCTGGCGTTCTCACG
GGCcgacggaggaagctttCTCACGCTACCGGCACCACTTTCCTGGATCT
AGAAGCACCCATCCGCCAGCTCCAACGCCACGCCGGgggcaacctccccc
ctttcgaGGCCTGGCTCCTCTTGCGAGGGCTGAAGTCCCTCCCGGCTCGG
ATGCGGACGCACTGTGAGAACGCGCACAGGTTGGCCCATTTCTTCGCGAG
CCACCCGAGGATTGCCGCCGTTCACTACCCGGGCctaccctcccaccccg
ggCACGCCGTGCACTCGGCCATGATGAGTCGGGAGGGTCTCTCCGGGAGC
ATGATGGCGATCCAGGTCCGGGCGCGGGacggcgagggggaggacggaag
ggaggaaggggcggaggtggaggcgatggtcCTGCGCGTAGTGGCCCGGC
TGCGGGTGTTCCGGCGAGCGACCTCCCTGGGGGGCACTGAGAGTCTGTGC
GAGCATCGCCGGAGCGTGGAAGGAGCGGAGAGCCGAACCCCGTGGGACCT
GGTTCGGCTCAGTGTGGGCCTGGAGGCCTAcgaggatttggaggaggact
gggTGCAGGCtttgggcgaggaggggtgacggggaaggagagggcggaag
cCCAGTGGACGAGACCCGATGATGCCTGTGGAGGCACTCGagtccagccc
cccccccgcgtacctgattcccttcctctaccccTTTCGACACCCAAGAC
CATCGACCCACTCTGTATAGGACCCTCTCAACGCCCTCCGGCTCGGcctc
cccttgctttttTTAAATTTAAGGTTGCTTGGTTTGCATTGAACGTTACT
TCTTGTGAACTGAACAGGCCAACACTTGCTTCCAAAATTGAATGCTTTTC
CATTCC back to topCoding sequence (CDS) from alignment at KK037253.1:160932..163237+ >rna9394 ID=rna9394|Name=rna9394|organism=Nannochloropsis gaditana|type=CDS|length=5352bp|location=Sequence derived from alignment at KK037253.1:160932..163237+ (Nannochloropsis gaditana)
ATGTGGCTTGGGGGGCACGACACGAACTTGACGCTTCCTTGGGTCTTTTT
GATATCATACACTCACATGCCAAGAAGGATCGAGACTATCCTCGCTCAAG
CAGGCTTACACTACCAGGACATCACAGCCGTTTCCTCCCGTGACGTGATC
CCCCCATTACACCTTTCTACCACCTTTGAGAGGGGTAGTGATGGCTCCTA
TCCCGGGGGCTTTGTCTACGCACGGCATGGCAATCCCACCCGGGCCTTGC
TGGAAAAAGTCATGACCGACTTGGAAGGCGGCGCCGACTGGTCCGCGGCC
TTCACATGCGGCATGCAGGCCGTGAccgccgtcttcctcgcctttggGGC
CCAGGCCACTGTGCTCCTGAACCAAGAGCTGTATCAGggcatccgcctcc
tcctggacgCCCCCTTCGGCTCCTGGGGGCTCCGTGCGCAGGTGGTGGAC
ATGACGGACCTGGGAGCCTTGGAGGTTGCCATGGCCCGAGTCTTCGCGGA
CCCGGCGACTGCGAGGGTGCTCCTGTGGCTGGAGACCCCCTCCAACCCCA
TGCTACAGATCATAGACGTCCGGGCGGTCATTGCCATGGCCGAAGGGCAG
GCCCGGCTCCACCGGAAGGACTTCGTCTCGGTGCTGGACACTACCTGGCT
CAcgccctacctcctccaggccgtcgGCCCCCTCCGCATCGACCTGACCC
TCGCCAGCGCCACCAAATTCCTGGGGGGGCACTCGGACCTGCTGGCTGGC
GTTCTCACGGGCcgacggaggaagctttCTCACGCTACCGGCACCACTTT
CCTGGATCTAGAAGCACCCATCCGCCAGCTCCAACGCCACGCCGGgggca
acctcccccctttcgaGGCCTGGCTCCTCTTGCGAGGGCTGAAGTCCCTC
CCGGCTCGGATGCGGACGCACTGTGAGAACGCGCACAGGTTGGCCCATTT
CTTCGCGAGCCACCCGAGGATTGCCGCCGTTCACTACCCGGGCctaccct
cccaccccgggCACGCCGTGCACTCGGCCATGATGAGTCGGGAGGGTCTC
TCCGGGAGCATGATGGCGATCCAGGTCCGGGCGCGGGacggcgaggggga
ggacggaagggaggaaggggcggaggtggaggcgatggtcCTGCGCGTAG
TGGCCCGGCTGCGGGTGTTCCGGCGAGCGACCTCCCTGGGGGGCACTGAG
AGTCTGTGCGAGCATCGCCGGAGCGTGGAAGGAGCGGAGAGCCGAACCCC
GTGGGACCTGGTTCGGCTCAGTGTGGGCCTGGAGGCCTAcgaggatttgg
aggaggactgggTGCAGGCtttgggcgaggaggggtgaATGTGGCTTGGG
GGGCACGACACGAACTTGACGCTTCCTTGGGTCTTTTTGATATCATACAC
TCACATGCCAAGAAGGATCGAGACTATCCTCGCTCAAGCAGGCTTACACT
ACCAGGACATCACAGCCGTTTCCTCCCGTGACGTGATCCCCCCATTACAC
CTTTCTACCACCTTTGAGAGGGGTAGTGATGGCTCCTATCCCGGGGGCTT
TGTCTACGCACGGCATGGCAATCCCACCCGGGCCTTGCTGGAAAAAGTCA
TGACCGACTTGGAAGGCGGCGCCGACTGGTCCGCGGCCTTCACATGCGGC
ATGCAGGCCGTGAccgccgtcttcctcgcctttggGGCCCAGGCCACTGT
GCTCCTGAACCAAGAGCTGTATCAGggcatccgcctcctcctggacgCCC
CCTTCGGCTCCTGGGGGCTCCGTGCGCAGGTGGTGGACATGACGGACCTG
GGAGCCTTGGAGGTTGCCATGGCCCGAGTCTTCGCGGACCCGGCGACTGC
GAGGGTGCTCCTGTGGCTGGAGACCCCCTCCAACCCCATGCTACAGATCA
TAGACGTCCGGGCGGTCATTGCCATGGCCGAAGGGCAGGCCCGGCTCCAC
CGGAAGGACTTCGTCTCGGTGCTGGACACTACCTGGCTCAcgccctacct
cctccaggccgtcgGCCCCCTCCGCATCGACCTGACCCTCGCCAGCGCCA
CCAAATTCCTGGGGGGGCACTCGGACCTGCTGGCTGGCGTTCTCACGGGC
cgacggaggaagctttCTCACGCTACCGGCACCACTTTCCTGGATCTAGA
AGCACCCATCCGCCAGCTCCAACGCCACGCCGGgggcaacctcccccctt
tcgaGGCCTGGCTCCTCTTGCGAGGGCTGAAGTCCCTCCCGGCTCGGATG
CGGACGCACTGTGAGAACGCGCACAGGTTGGCCCATTTCTTCGCGAGCCA
CCCGAGGATTGCCGCCGTTCACTACCCGGGCctaccctcccaccccgggC
ACGCCGTGCACTCGGCCATGATGAGTCGGGAGGGTCTCTCCGGGAGCATG
ATGGCGATCCAGGTCCGGGCGCGGGacggcgagggggaggacggaaggga
ggaaggggcggaggtggaggcgatggtcCTGCGCGTAGTGGCCCGGCTGC
GGGTGTTCCGGCGAGCGACCTCCCTGGGGGGCACTGAGAGTCTGTGCGAG
CATCGCCGGAGCGTGGAAGGAGCGGAGAGCCGAACCCCGTGGGACCTGGT
TCGGCTCAGTGTGGGCCTGGAGGCCTAcgaggatttggaggaggactggg
TGCAGGCtttgggcgaggaggggtgaATGTGGCTTGGGGGGCACGACACG
AACTTGACGCTTCCTTGGGTCTTTTTGATATCATACACTCACATGCCAAG
AAGGATCGAGACTATCCTCGCTCAAGCAGGCTTACACTACCAGGACATCA
CAGCCGTTTCCTCCCGTGACGTGATCCCCCCATTACACCTTTCTACCACC
TTTGAGAGGGGTAGTGATGGCTCCTATCCCGGGGGCTTTGTCTACGCACG
GCATGGCAATCCCACCCGGGCCTTGCTGGAAAAAGTCATGACCGACTTGG
AAGGCGGCGCCGACTGGTCCGCGGCCTTCACATGCGGCATGCAGGCCGTG
AccgccgtcttcctcgcctttggGGCCCAGGCCACTGTGCTCCTGAACCA
AGAGCTGTATCAGggcatccgcctcctcctggacgCCCCCTTCGGCTCCT
GGGGGCTCCGTGCGCAGGTGGTGGACATGACGGACCTGGGAGCCTTGGAG
GTTGCCATGGCCCGAGTCTTCGCGGACCCGGCGACTGCGAGGGTGCTCCT
GTGGCTGGAGACCCCCTCCAACCCCATGCTACAGATCATAGACGTCCGGG
CGGTCATTGCCATGGCCGAAGGGCAGGCCCGGCTCCACCGGAAGGACTTC
GTCTCGGTGCTGGACACTACCTGGCTCAcgccctacctcctccaggccgt
cgGCCCCCTCCGCATCGACCTGACCCTCGCCAGCGCCACCAAATTCCTGG
GGGGGCACTCGGACCTGCTGGCTGGCGTTCTCACGGGCcgacggaggaag
ctttCTCACGCTACCGGCACCACTTTCCTGGATCTAGAAGCACCCATCCG
CCAGCTCCAACGCCACGCCGGgggcaacctcccccctttcgaGGCCTGGC
TCCTCTTGCGAGGGCTGAAGTCCCTCCCGGCTCGGATGCGGACGCACTGT
GAGAACGCGCACAGGTTGGCCCATTTCTTCGCGAGCCACCCGAGGATTGC
CGCCGTTCACTACCCGGGCctaccctcccaccccgggCACGCCGTGCACT
CGGCCATGATGAGTCGGGAGGGTCTCTCCGGGAGCATGATGGCGATCCAG
GTCCGGGCGCGGGacggcgagggggaggacggaagggaggaaggggcgga
ggtggaggcgatggtcCTGCGCGTAGTGGCCCGGCTGCGGGTGTTCCGGC
GAGCGACCTCCCTGGGGGGCACTGAGAGTCTGTGCGAGCATCGCCGGAGC
GTGGAAGGAGCGGAGAGCCGAACCCCGTGGGACCTGGTTCGGCTCAGTGT
GGGCCTGGAGGCCTAcgaggatttggaggaggactgggTGCAGGCtttgg
gcgaggaggggtgaATGTGGCTTGGGGGGCACGACACGAACTTGACGCTT
CCTTGGGTCTTTTTGATATCATACACTCACATGCCAAGAAGGATCGAGAC
TATCCTCGCTCAAGCAGGCTTACACTACCAGGACATCACAGCCGTTTCCT
CCCGTGACGTGATCCCCCCATTACACCTTTCTACCACCTTTGAGAGGGGT
AGTGATGGCTCCTATCCCGGGGGCTTTGTCTACGCACGGCATGGCAATCC
CACCCGGGCCTTGCTGGAAAAAGTCATGACCGACTTGGAAGGCGGCGCCG
ACTGGTCCGCGGCCTTCACATGCGGCATGCAGGCCGTGAccgccgtcttc
ctcgcctttggGGCCCAGGCCACTGTGCTCCTGAACCAAGAGCTGTATCA
GggcatccgcctcctcctggacgCCCCCTTCGGCTCCTGGGGGCTCCGTG
CGCAGGTGGTGGACATGACGGACCTGGGAGCCTTGGAGGTTGCCATGGCC
CGAGTCTTCGCGGACCCGGCGACTGCGAGGGTGCTCCTGTGGCTGGAGAC
CCCCTCCAACCCCATGCTACAGATCATAGACGTCCGGGCGGTCATTGCCA
TGGCCGAAGGGCAGGCCCGGCTCCACCGGAAGGACTTCGTCTCGGTGCTG
GACACTACCTGGCTCAcgccctacctcctccaggccgtcgGCCCCCTCCG
CATCGACCTGACCCTCGCCAGCGCCACCAAATTCCTGGGGGGGCACTCGG
ACCTGCTGGCTGGCGTTCTCACGGGCcgacggaggaagctttCTCACGCT
ACCGGCACCACTTTCCTGGATCTAGAAGCACCCATCCGCCAGCTCCAACG
CCACGCCGGgggcaacctcccccctttcgaGGCCTGGCTCCTCTTGCGAG
GGCTGAAGTCCCTCCCGGCTCGGATGCGGACGCACTGTGAGAACGCGCAC
AGGTTGGCCCATTTCTTCGCGAGCCACCCGAGGATTGCCGCCGTTCACTA
CCCGGGCctaccctcccaccccgggCACGCCGTGCACTCGGCCATGATGA
GTCGGGAGGGTCTCTCCGGGAGCATGATGGCGATCCAGGTCCGGGCGCGG
Gacggcgagggggaggacggaagggaggaaggggcggaggtggaggcgat
ggtcCTGCGCGTAGTGGCCCGGCTGCGGGTGTTCCGGCGAGCGACCTCCC
TGGGGGGCACTGAGAGTCTGTGCGAGCATCGCCGGAGCGTGGAAGGAGCG
GAGAGCCGAACCCCGTGGGACCTGGTTCGGCTCAGTGTGGGCCTGGAGGC
CTAcgaggatttggaggaggactgggTGCAGGCtttgggcgaggaggggt
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