EWM21316.1, cds9346 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21316.1 vs. NCBI_GenBank
Match: gi|585101499|gb|EWM21316.1| (anaphase-promoting complex subunit 2 [Nannochloropsis gaditana]) HSP 1 Score: 715.687 bits (1846), Expect = 0.000e+0 Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0
Query: 1 MGEGGHVVGSRGGGGDRDREGAIADPAREAEAGAKDTVVDATIISHHFWPPLQEEELTLHPRMGACLDGYGRAYAVLKNPRKLEWKAHLGLVHIELEFEGAEGEKGEDRQGFGGVEGLQGGGVSSGSVKTGSAVGSSSETEKGVGETGRRARLSLKVSPVHASLIMHFEDRDEWTLQELAHVTGIDADLVARKMAFWVNQGVVASALSSSATSSSQAQAGASVSALLPSLSGRPTGGLLYRLLHRRDQECGGTLGRREGTMGMEEDDLEAAVSSHAQEAQEMDLYMSYVVGMLGTYGGRSVRAIHDTLRIWVGGERPMTALKLPEVEKILNRLVEERKVEMVGGVYQLVSRPAHHRQ 357
MGEGGHVVGSRGGGGDRDREGAIADPAREAEAGAKDTVVDATIISHHFWPPLQEEELTLHPRMGACLDGYGRAYAVLKNPRKLEWKAHLGLVHIELEFEGAEGEKGEDRQGFGGVEGLQGGGVSSGSVKTGSAVGSSSETEKGVGETGRRARLSLKVSPVHASLIMHFEDRDEWTLQELAHVTGIDADLVARKMAFWVNQGVVASALSSSATSSSQAQAGASVSALLPSLSGRPTGGLLYRLLHRRDQECGGTLGRREGTMGMEEDDLEAAVSSHAQEAQEMDLYMSYVVGMLGTYGGRSVRAIHDTLRIWVGGERPMTALKLPEVEKILNRLVEERKVEMVGGVYQLVSRPAHHRQ
Sbjct: 1 MGEGGHVVGSRGGGGDRDREGAIADPAREAEAGAKDTVVDATIISHHFWPPLQEEELTLHPRMGACLDGYGRAYAVLKNPRKLEWKAHLGLVHIELEFEGAEGEKGEDRQGFGGVEGLQGGGVSSGSVKTGSAVGSSSETEKGVGETGRRARLSLKVSPVHASLIMHFEDRDEWTLQELAHVTGIDADLVARKMAFWVNQGVVASALSSSATSSSQAQAGASVSALLPSLSGRPTGGLLYRLLHRRDQECGGTLGRREGTMGMEEDDLEAAVSSHAQEAQEMDLYMSYVVGMLGTYGGRSVRAIHDTLRIWVGGERPMTALKLPEVEKILNRLVEERKVEMVGGVYQLVSRPAHHRQ 357
BLAST of EWM21316.1 vs. NCBI_GenBank
Match: gi|700195990|gb|KGN51167.1| (hypothetical protein Csa_5G470570 [Cucumis sativus]) HSP 1 Score: 133.65 bits (335), Expect = 2.869e-33 Identity = 86/310 (27.74%), Postives = 142/310 (45.81%), Query Frame = 0
Query: 39 VDATIISHHFWPPLQEEELTLHPRMGACLDGYGRAYAVLKNPRKLEWKAHLGLVHIELEFEGAEGEKGEDRQGFGGVEGLQGGGVSSGSVKTGSAVGSSSETEKGVGETGRRARLSLKVSPVHASLIMHFEDRDEWTLQELAHVTGIDADLVARKMAFWVNQGVVASALSSSATSSSQAQAGASVSALLPSLSGRPTGGLLYRLLHRRDQECGGTLGRREGTMGMEEDDLEAAVSSHAQEAQEMDLYMSYVVGMLGTYGGRSVRAIHDTLRIWVGGERPMTALKLPEVEKILNRLVEERKVEMVGGVYQL 348
+DATIIS +FWPP+Q+E + L + L Y + + +K PRKL+WK +LG V +EL+FE E L V+PVHA +IM F+ + W+ + LA G+ D+++R++ FWVN+G+ LS S T+ S V +++ + G + D G G EG++ ED Q +EM +Y +++GML +G ++ IH+TL+++ + P + +++ L+ LV E K+E+ G+Y L
Sbjct: 19 LDATIISSNFWPPIQDENINLPASVDHLLTDYAQRFNEIKTPRKLQWKKNLGTVKLELQFEDRE--------------------------------------------------LQFTVAPVHAVIIMQFQHQKSWSSRSLAAAVGVPVDILSRRINFWVNKGI----LSESRTADSTDHVYVLVESMIDTSKNVSNNG------NNEDLMVGEDEG--EGSVASVED----------QIRKEMTVYEKFILGMLTNFGSMALDRIHNTLKMFCVAD-PSYDKSIQQLQSFLSGLVSEEKLELRDGMYLL 255
BLAST of EWM21316.1 vs. NCBI_GenBank
Match: gi|1063469833|ref|XP_017970858.1| (PREDICTED: anaphase-promoting complex subunit 2 isoform X1 [Theobroma cacao] >gi|508709963|gb|EOY01860.1| Anaphase-promoting complex/cyclosome 2 isoform 2 [Theobroma cacao]) HSP 1 Score: 140.198 bits (352), Expect = 5.672e-33 Identity = 89/331 (26.89%), Postives = 147/331 (44.41%), Query Frame = 0
Query: 18 DREGAIADPAREAEAGAKDTVVDATIISHHFWPPLQEEELTLHPRMGACLDGYGRAYAVLKNPRKLEWKAHLGLVHIELEFEGAEGEKGEDRQGFGGVEGLQGGGVSSGSVKTGSAVGSSSETEKGVGETGRRARLSLKVSPVHASLIMHFEDRDEWTLQELAHVTGIDADLVARKMAFWVNQGVVASALSSSATSSSQAQAGASVSALLPSLSGRPTGGLLYRLLHRRDQECGGTLGRREGTMGMEEDDLEAAVSSHAQEAQEMDLYMSYVVGMLGTYGGRSVRAIHDTLRIWVGGERPMTALKLPEVEKILNRLVEERKVEMVGGVYQL 348
+++ I A AE G +DATIIS +FWPP+QEE L + + L Y R + +K PRKL WK +LG V +EL+FE + V+PVHA++IM F+D+ WT + LA TGI D++ R+++FW+++GV+ +L + ++ V + GG G E + +E+ + S Q +EM +Y +++GML +G ++ IH+TL+++ + P L +++ L+ LV E K+E+ G+Y L
Sbjct: 620 NKQSQIDADAELAETGISLDNLDATIISSNFWPPIQEEALIIPDPVDQLLSDYARRFHEIKTPRKLLWKKNLGTVKLELQFEDKA--------------------------------------------------MQFTVAPVHAAIIMQFQDQTSWTSKNLAAATGIPVDVLYRRISFWISKGVLTESLGTDPSNHVFTLVDGMVDT----------------------SKNGGNSGNCEELLAGDEEPERSVASIEDQLRKEMTVYEKFIMGMLTNFGSMALDRIHNTLKMFCVADPPYDK-SLQQLQSFLSGLVSEEKLELRDGMYFL 877
BLAST of EWM21316.1 vs. NCBI_GenBank
Match: gi|1204932837|ref|XP_021299696.1| (anaphase-promoting complex subunit 2 isoform X1 [Herrania umbratica]) HSP 1 Score: 139.813 bits (351), Expect = 7.398e-33 Identity = 89/331 (26.89%), Postives = 147/331 (44.41%), Query Frame = 0
Query: 18 DREGAIADPAREAEAGAKDTVVDATIISHHFWPPLQEEELTLHPRMGACLDGYGRAYAVLKNPRKLEWKAHLGLVHIELEFEGAEGEKGEDRQGFGGVEGLQGGGVSSGSVKTGSAVGSSSETEKGVGETGRRARLSLKVSPVHASLIMHFEDRDEWTLQELAHVTGIDADLVARKMAFWVNQGVVASALSSSATSSSQAQAGASVSALLPSLSGRPTGGLLYRLLHRRDQECGGTLGRREGTMGMEEDDLEAAVSSHAQEAQEMDLYMSYVVGMLGTYGGRSVRAIHDTLRIWVGGERPMTALKLPEVEKILNRLVEERKVEMVGGVYQL 348
+++ I A AE G +DATIIS +FWPP+QEE L + + L Y R + +K PRKL WK +LG V +EL+FE + V+PVHA++IM F+D+ WT + LA TGI D++ R+++FW+++GV+ +L + ++ V + GG G E + +E+ + S Q +EM +Y +++GML +G ++ IH+TL+++ + P L +++ L+ LV E K+E+ G+Y L
Sbjct: 620 NKQSQIGADAESAETGISLDNLDATIISSNFWPPIQEEALIIPYPVDQLLSEYARRFHEIKTPRKLLWKKNLGTVKLELQFEDKA--------------------------------------------------MQFTVAPVHAAIIMQFQDQMSWTSKNLAAATGIPVDVLYRRISFWISKGVLTESLGTDPSNHVFTLVDGMVDT----------------------SKSGGNSGNCEELLAGDEEPERSVASIEDQLRKEMTVYEKFIMGMLTNFGSMALDRIHNTLKMFCVADPPYDK-SLQQLQSFLSGLVSEEKLELRDGMYFL 877
BLAST of EWM21316.1 vs. NCBI_GenBank
Match: gi|702459081|ref|XP_010027677.1| (PREDICTED: anaphase-promoting complex subunit 2 [Eucalyptus grandis] >gi|629087992|gb|KCW54245.1| hypothetical protein EUGRSUZ_I00217 [Eucalyptus grandis] >gi|629087993|gb|KCW54246.1| hypothetical protein EUGRSUZ_I00217 [Eucalyptus grandis]) HSP 1 Score: 139.428 bits (350), Expect = 1.313e-32 Identity = 87/310 (28.06%), Postives = 142/310 (45.81%), Query Frame = 0
Query: 39 VDATIISHHFWPPLQEEELTLHPRMGACLDGYGRAYAVLKNPRKLEWKAHLGLVHIELEFEGAEGEKGEDRQGFGGVEGLQGGGVSSGSVKTGSAVGSSSETEKGVGETGRRARLSLKVSPVHASLIMHFEDRDEWTLQELAHVTGIDADLVARKMAFWVNQGVVASALSSSATSSSQAQAGASVSALLPSLSGRPTGGLLYRLLHRRDQECGGTLGRREGTMGMEEDDLEAAVSSHAQEAQEMDLYMSYVVGMLGTYGGRSVRAIHDTLRIWVGGERPMTALKLPEVEKILNRLVEERKVEMVGGVYQL 348
+D+TIIS +FWPP+QEE L + L Y R Y +K PRKL WK ++G V +EL+FE E + V+P+HA++IM F+D+ WT + LA G+ D++ R+++FW+++G++ T S + + + +LL S + G G T E G EE + + SS Q +EM +Y Y+VGML +G ++ IH+TL+++ + P L +++ L+ LV E K+E+ G++ L
Sbjct: 635 LDSTIISSNFWPPIQEETFNLPEPVDQLLSDYARRYNEIKTPRKLLWKKNIGTVKLELQFEDRE--------------------------------------------------MQFTVAPLHAAIIMQFQDQKSWTSKNLAIAMGVPVDVLNRRISFWISKGII--------TESVGSDSDDRIFSLLESRADTSRNG-------------GNTECFEEPLAGDEEGE-NSVASSEDQLRKEMTVYEKYIVGMLTNFGSMALDRIHNTLKMFCVADPPYDK-SLQQLQSFLSSLVVEEKLELRDGMFCL 871
BLAST of EWM21316.1 vs. NCBI_GenBank
Match: gi|1063469836|ref|XP_017970859.1| (PREDICTED: anaphase-promoting complex subunit 2 isoform X2 [Theobroma cacao] >gi|508709962|gb|EOY01859.1| Anaphase-promoting complex/cyclosome 2 isoform 1 [Theobroma cacao] >gi|508709964|gb|EOY01861.1| Anaphase-promoting complex/cyclosome 2 isoform 1 [Theobroma cacao]) HSP 1 Score: 139.043 bits (349), Expect = 1.518e-32 Identity = 88/322 (27.33%), Postives = 143/322 (44.41%), Query Frame = 0
Query: 27 AREAEAGAKDTVVDATIISHHFWPPLQEEELTLHPRMGACLDGYGRAYAVLKNPRKLEWKAHLGLVHIELEFEGAEGEKGEDRQGFGGVEGLQGGGVSSGSVKTGSAVGSSSETEKGVGETGRRARLSLKVSPVHASLIMHFEDRDEWTLQELAHVTGIDADLVARKMAFWVNQGVVASALSSSATSSSQAQAGASVSALLPSLSGRPTGGLLYRLLHRRDQECGGTLGRREGTMGMEEDDLEAAVSSHAQEAQEMDLYMSYVVGMLGTYGGRSVRAIHDTLRIWVGGERPMTALKLPEVEKILNRLVEERKVEMVGGVYQL 348
A AE G +DATIIS +FWPP+QEE L + + L Y R + +K PRKL WK +LG V +EL+FE + V+PVHA++IM F+D+ WT + LA TGI D++ R+++FW+++GV+ +L + ++ V + GG G E + +E+ + S Q +EM +Y +++GML +G ++ IH+TL+++ + P L +++ L+ LV E K+E+ G+Y L
Sbjct: 627 AELAETGISLDNLDATIISSNFWPPIQEEALIIPDPVDQLLSDYARRFHEIKTPRKLLWKKNLGTVKLELQFEDKA--------------------------------------------------MQFTVAPVHAAIIMQFQDQTSWTSKNLAAATGIPVDVLYRRISFWISKGVLTESLGTDPSNHVFTLVDGMVDT----------------------SKNGGNSGNCEELLAGDEEPERSVASIEDQLRKEMTVYEKFIMGMLTNFGSMALDRIHNTLKMFCVADPPYDK-SLQQLQSFLSGLVSEEKLELRDGMYFL 875
BLAST of EWM21316.1 vs. NCBI_GenBank
Match: gi|763813382|gb|KJB80234.1| (hypothetical protein B456_013G087900 [Gossypium raimondii]) HSP 1 Score: 138.272 bits (347), Expect = 1.823e-32 Identity = 88/324 (27.16%), Postives = 145/324 (44.75%), Query Frame = 0
Query: 25 DPAREAEAGAKDTVVDATIISHHFWPPLQEEELTLHPRMGACLDGYGRAYAVLKNPRKLEWKAHLGLVHIELEFEGAEGEKGEDRQGFGGVEGLQGGGVSSGSVKTGSAVGSSSETEKGVGETGRRARLSLKVSPVHASLIMHFEDRDEWTLQELAHVTGIDADLVARKMAFWVNQGVVASALSSSATSSSQAQAGASVSALLPSLSGRPTGGLLYRLLHRRDQECGGTLGRREGTMGMEEDDLEAAVSSHAQEAQEMDLYMSYVVGMLGTYGGRSVRAIHDTLRIWVGGERPMTALKLPEVEKILNRLVEERKVEMVGGVYQL 348
DP AE G +DATIIS +FWPP+Q+E L + + L Y R + +K PRKL WK +LG V +EL+FE + V+PVHA++IM F+D+ WT + LA TGI D++ R+++FW+++GV+ +L + + + A G+ +G G E + +E+ + S Q +EM +Y +++GML +G ++ IH+TL+++ + P L +++ L+ LV E K+E+ G+Y L
Sbjct: 431 DPV-AAETGISLDNLDATIISSNFWPPIQDEALVIPESVDQLLSDYARRFHQIKTPRKLIWKKNLGTVKLELQFEDKA--------------------------------------------------MQFTVAPVHAAIIMQFQDQTSWTSKNLAAATGIPVDVLNRRISFWISKGVLTESLGTDPSDHVFTLVDGMIEA------GKNSGN----------------TGNCEELLAGDEEAERSVASVEDQLRKEMTVYEKFILGMLTNFGSMALDRIHNTLKMFCVADPPYDK-SLQQLQSFLSGLVSEEKLELRDGMYFL 680
BLAST of EWM21316.1 vs. NCBI_GenBank
Match: gi|1204932839|ref|XP_021299697.1| (anaphase-promoting complex subunit 2 isoform X2 [Herrania umbratica]) HSP 1 Score: 138.658 bits (348), Expect = 2.076e-32 Identity = 88/322 (27.33%), Postives = 143/322 (44.41%), Query Frame = 0
Query: 27 AREAEAGAKDTVVDATIISHHFWPPLQEEELTLHPRMGACLDGYGRAYAVLKNPRKLEWKAHLGLVHIELEFEGAEGEKGEDRQGFGGVEGLQGGGVSSGSVKTGSAVGSSSETEKGVGETGRRARLSLKVSPVHASLIMHFEDRDEWTLQELAHVTGIDADLVARKMAFWVNQGVVASALSSSATSSSQAQAGASVSALLPSLSGRPTGGLLYRLLHRRDQECGGTLGRREGTMGMEEDDLEAAVSSHAQEAQEMDLYMSYVVGMLGTYGGRSVRAIHDTLRIWVGGERPMTALKLPEVEKILNRLVEERKVEMVGGVYQL 348
A AE G +DATIIS +FWPP+QEE L + + L Y R + +K PRKL WK +LG V +EL+FE + V+PVHA++IM F+D+ WT + LA TGI D++ R+++FW+++GV+ +L + ++ V + GG G E + +E+ + S Q +EM +Y +++GML +G ++ IH+TL+++ + P L +++ L+ LV E K+E+ G+Y L
Sbjct: 627 AESAETGISLDNLDATIISSNFWPPIQEEALIIPYPVDQLLSEYARRFHEIKTPRKLLWKKNLGTVKLELQFEDKA--------------------------------------------------MQFTVAPVHAAIIMQFQDQMSWTSKNLAAATGIPVDVLYRRISFWISKGVLTESLGTDPSNHVFTLVDGMVDT----------------------SKSGGNSGNCEELLAGDEEPERSVASIEDQLRKEMTVYEKFIMGMLTNFGSMALDRIHNTLKMFCVADPPYDK-SLQQLQSFLSGLVSEEKLELRDGMYFL 875
BLAST of EWM21316.1 vs. NCBI_GenBank
Match: gi|219122312|ref|XP_002181491.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406767|gb|EEC46705.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 138.272 bits (347), Expect = 2.379e-32 Identity = 94/323 (29.10%), Postives = 140/323 (43.34%), Query Frame = 0
Query: 33 GAKDTVVDATIISHHFWPPLQEEELTLHPRMGACLDGYGRAYAVLKNPRKLEWKAHLGLVHIELEF--EGAEGEKGEDRQGFGGVEGLQGGGVSSGSVKTGSAVGSSSETEKGVGETGRRARLSLKVSPVHASLIMHFEDRDEWTLQELAHVTGIDADLVARKMAFWVNQGVVASALSSSATSSSQAQAGASVSALLPSLSGRPTGGLLYRLLHRRDQECGGTLGRREGTMGMEEDDL-EAAVSSHAQEAQEMDLYMSYVVGMLGTYGGRSVRAIHDTLRIWVGGERPMTALKLPEVEKILNRLVEERKVEM-VGGVYQLVSR 351
G + VDA IISH FWP L + L HPR+ LD + YA LKNPRKL W LG V +EL+ +G GE + F SP+ A+LI HFEDR EWT ++L++ TG+ + + ++M +W+N V+ ++ P G +Y L E G + + E+DDL + VS AQ+ QEMD+++SYVVGML G ++ IH+ L+ +V G ++ L L + ++E G+Y+L +
Sbjct: 514 GTTSSTVDAAIISHIFWPTLHSDSLVHHPRIQVKLDDFSTMYANLKNPRKLVWMHQLGTVQLELDVIEDGPNGEPVIMTKEFS-------------------------------------------CSPLLATLISHFEDRTEWTAEDLSNETGVASHAIKKRMIYWINHRVITVHIT-------------------------PAGVTVYNLATLASHEENDAHGSPQH-LASEDDDLHDHTVSISAQQDQEMDVFLSYVVGMLTNLGQLPLKTIHNNLKTFVTGSDVRYDKTPQQLSAFLQNLCRQERLECGPDGMYKLFKK 767
BLAST of EWM21316.1 vs. NCBI_GenBank
Match: gi|1150102643|ref|XP_020237402.1| (anaphase-promoting complex subunit 2 [Cajanus cajan] >gi|1150102645|ref|XP_020237403.1| anaphase-promoting complex subunit 2 [Cajanus cajan] >gi|1012333364|gb|KYP44760.1| Anaphase-promoting complex subunit 2 [Cajanus cajan]) HSP 1 Score: 138.272 bits (347), Expect = 2.524e-32 Identity = 83/313 (26.52%), Postives = 143/313 (45.69%), Query Frame = 0
Query: 38 VVDATIISHHFWPPLQEEELTLHPRMGACLDGYGRAYAVLKNPRKLEWKAHLGLVHIELEFEGAEGEKGEDRQGFGGVEGLQGGGVSSGSVKTGSAVGSSSETEKGVGETGRRARLSLKVSPVHASLIMHFEDRDEWTLQELAHVTGIDADLVARKMAFWVNQGVVASALSSSATSSSQAQAGASVSALLPSLSGRPTGGLLYRLLHR--RDQECGGTLGRREGTMGMEEDDLEAAVSSHAQEAQEMDLYMSYVVGMLGTYGGRSVRAIHDTLRIWVGGERPMTALKLPEVEKILNRLVEERKVEMVGGVYQL 348
V+ ATIIS +FWPP+Q+E L L + L Y + + +K PRKL+WK LG + +EL+F+ E + V+PVHAS+IM F+D+ WT + LA GI AD++ R++ FW+++G++A + G + +Y ++ + GG G + +G +E++ + S Q +EM +Y +++GML +G ++ IH+TL+++ + P L +++ L+ LV E K+E+ G+Y L
Sbjct: 646 VISATIISSNFWPPIQDEPLNLPEPIDQLLSDYAKRFNEIKTPRKLQWKKSLGTIKLELQFQDRE--------------------------------------------------MQFTVAPVHASIIMKFQDQPSWTSKNLAAAIGIPADVLNRRINFWISKGIIAES------------------------QGEDSSDHVYTIVENMVETSKNGGNTGCTQELLGGDEEEDRSVASVENQLRKEMTVYEKFILGMLTNFGSMALDRIHNTLKMFCIADPPYDK-SLQQLQSFLSGLVSEEKLELRDGMYFL 883 The following BLAST results are available for this feature:
BLAST of EWM21316.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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