rna9351, rna9351 (mRNA) Nannochloropsis gaditana

Overview
Namerna9351
Unique Namerna9351
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length225
Alignment locationKK037253.1:40908..41564 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100075g25.2872.mrna
Orig protein idgnl|cribi|Naga_100075g25.2872
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:40908..41564 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100075g25gene9068Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21338.1cds9321Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9351rna9351-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9351 ID=rna9351|Name=rna9351|organism=Nannochloropsis gaditana|type=mRNA|length=225bp
ATGGCACAAGTGAGTCCTGCGTGCCATCGTTCCTCTCCCTGTAATTTTTG
TCAGTCCTGTTTTGCTACAAAGTTATTTCAGGGCAGCTCCTTCAGACATA
GGCGGGATACGATAACATCACAACATGAGAATGAGGACTATCTTCACCGT
TTTGGGGCTCTTTGCAACCGCCCGGGCCTTCAGTCTCACTTCCTTCGTCA
CACCCTCAATAAGACTTACACATGA
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protein sequence of rna9351

>rna9351-protein ID=rna9351-protein|Name=rna9351|organism=Nannochloropsis gaditana|type=polypeptide|length=218bp
MLGFGAILGFLSASALAPASLPPNKLKPVFGALGFPAATFLEVGTGVFCA
LSGAGLAPGFAGSLETLVGGGMGFFRAADAAGFLSPPPKRLKGLPLLVEP
LLLAAFEADLGAPCGFFKGEGVEGGLLIMTGGGGGLAFLRTGGGTGLPAP
TDGGDLAVARVGGLFALRGDEETGAFLGAGSGALDLASATTAGFGVSSAL
GPSPARVPVKGLVRASNR
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mRNA from alignment at KK037253.1:40908..41564-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9351 ID=rna9351|Name=rna9351|organism=Nannochloropsis gaditana|type=mRNA|length=657bp|location=Sequence derived from alignment at KK037253.1:40908..41564- (Nannochloropsis gaditana)
ATGCTTGGCTTTGGAGCAATCTTAGGTTTTTTATCAGCATCGGCCTTGGC
TCCTGCATCATTGCCACCGAATAAACTAAAGCCTGTATTCGGCGCTTTGG
GCTTCCCAGCTGCAACCTTCTTGGAAGTCGGTACCGGAGTTTTTTGCGCC
TTGAGCGGGGCGGGCTTAGCACCTGGTTTCGCAGGGAGCTTGGAGACCTT
GGTGGGAGGAGGAATGGGCTTCTTCAGGGCAGCGGATGCCGCCGGCTTTT
TGTCGCCTCCCCCAAAGAGGCTGAAGGGTTTGCCGTTACTTGTTGAACCG
CTGCTCTTGGCAGCATTTGAGGCGGATTTAGGCGCGCCTTGTGGCTTCTT
CAAGGGAGAAGGGGTAGAAGGTGGCTTGCTCATCATGACAGGCGGAGGAG
GGGGGTTGGCCTTCTTGAGGACAGGAGGTGGCACAGGTTTGCCAGCGCCC
ACAGACGGCGGGGACTTGGCTGTTGCTAGAGTGGGGGGGCTCTTCGCCTT
AAGGGGGGACGAGGAAACGGGAGCTTTCTTGGGAGCTGGCTCGGGAGCCT
TGGACTTGGCTTCTGCGACAACAGCCGGTTTCGGAGTCTCGTCCGCGCTG
GGCCCCTCCCCAGCCCGCGTCCCCGTGAAAGGGCTGGTCAGAGCGTCCAA
CAGGTAG
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Coding sequence (CDS) from alignment at KK037253.1:40908..41564-

>rna9351 ID=rna9351|Name=rna9351|organism=Nannochloropsis gaditana|type=CDS|length=657bp|location=Sequence derived from alignment at KK037253.1:40908..41564- (Nannochloropsis gaditana)
ATGCTTGGCTTTGGAGCAATCTTAGGTTTTTTATCAGCATCGGCCTTGGC
TCCTGCATCATTGCCACCGAATAAACTAAAGCCTGTATTCGGCGCTTTGG
GCTTCCCAGCTGCAACCTTCTTGGAAGTCGGTACCGGAGTTTTTTGCGCC
TTGAGCGGGGCGGGCTTAGCACCTGGTTTCGCAGGGAGCTTGGAGACCTT
GGTGGGAGGAGGAATGGGCTTCTTCAGGGCAGCGGATGCCGCCGGCTTTT
TGTCGCCTCCCCCAAAGAGGCTGAAGGGTTTGCCGTTACTTGTTGAACCG
CTGCTCTTGGCAGCATTTGAGGCGGATTTAGGCGCGCCTTGTGGCTTCTT
CAAGGGAGAAGGGGTAGAAGGTGGCTTGCTCATCATGACAGGCGGAGGAG
GGGGGTTGGCCTTCTTGAGGACAGGAGGTGGCACAGGTTTGCCAGCGCCC
ACAGACGGCGGGGACTTGGCTGTTGCTAGAGTGGGGGGGCTCTTCGCCTT
AAGGGGGGACGAGGAAACGGGAGCTTTCTTGGGAGCTGGCTCGGGAGCCT
TGGACTTGGCTTCTGCGACAACAGCCGGTTTCGGAGTCTCGTCCGCGCTG
GGCCCCTCCCCAGCCCGCGTCCCCGTGAAAGGGCTGGTCAGAGCGTCCAA
CAGGTAG
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Synonyms
Publications