rna9337, rna9337 (mRNA) Nannochloropsis gaditana

Overview
Namerna9337
Unique Namerna9337
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1057
Alignment locationKK037252.1:427532..428239 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100932g1.7812.mrna
Orig protein idgnl|cribi|Naga_100932g1.7812
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:427532..428239 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100932g1gene9053Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9337rna9337-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21365.1cds9307Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9337 ID=rna9337|Name=rna9337|organism=Nannochloropsis gaditana|type=mRNA|length=1057bp
TCTCTATCTACATCATACATACGACCCGATTACTACGCCCTTCCCAAGGA
CCTGGATCACTGCAGGAAAAAGCATCGCGCACATTGTTCTCGTATTGCAA
CAATCTTCACACATGGAACCCCACTGGTTCTTCTGACGGTCCAAATACCA
GGCTTTATGTGACAGGAAATGGCCTTGTAAGACCCGGTATGCCTGCCCCC
GGAGGTCGCGACGGGTATGAGCAAGAGACAGGGCACAAAGTGCACCTAAA
TTCCTCTTTTTTTTCATCCCGCTTACTATTCCTGGAAGCCTTCACTCATC
TGCTAACGTAATGACTGAAAATGTGCCTGTTTGTTTTCGTCTGTGCGAAT
TTGTGAGTCAAAACCGACCTGGGAGCAGGGCGGGCTCTGGGAGAGTCCTC
TTCCCTCGGAGACAAGGTTGTACCCTACACACCACAAGATGAGGCACGAA
CGTAGAGGGAGCGCTTCGAATTGTTCCATAGGTTATGCTTCAAGTGTGTG
CACATACTAAAGCGCCGGCGCGGACGGGAATACAACGTTTTTTTGTGGTT
GCTTTGTTCCTGTGTGGGCACAAGCCTTCTCGGCCCCTGTTTCTCCAACA
CTACGACCACCTGCTGCGCTTCAAGGCCACAACTTTTCCGACCGCGCTGC
TCTTCACTCCTGACGTTTCCATGTCCACACGCACAGGCGATGGTATGGTG
AATGCGGCAGGCTCAGTGCTGACCGCGGTTGTGGGCCTCGCGAGGTCGCC
GCAACCCAGAGGAGGCGATGGCGACAAAGGGGCCTGGCCGATGACTTCAC
CGGCCGCAAACACGGACAACGTCCCAAGCCCTTGCGCCGTGACTGGGAAG
AAGGAAAGTTCCCTGGGCATGGCGGCTACAGCGGAAGGGAAGGGCATTGG
TGCGGTGGTGGAGGCGGCAGAGGTGAGGGGGGGAGAGGGAGGGAGGGAGG
GAGGGAGAAGTCCTGCATGTATCAACTTACGGAGCGACGCGATGGGGCTC
AACGATGAAGTGTCTCGAACTTTTAATGGAAGTGGGAGGGAAAGTGGTCA
AGAATGA
back to top

protein sequence of rna9337

>rna9337-protein ID=rna9337-protein|Name=rna9337|organism=Nannochloropsis gaditana|type=polypeptide|length=117bp
MQQPRRRTSYPPPPPMSYPRPLYHRYEARHPHAPRHYRVPPPPQASPGWV
TATSHAPRELVGLPYPDYPREGEWVLSLEQLYLQSPSRRDGLSDAQERER
RHDGAALIDRMARRLDL
back to top

mRNA from alignment at KK037252.1:427532..428239-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9337 ID=rna9337|Name=rna9337|organism=Nannochloropsis gaditana|type=mRNA|length=708bp|location=Sequence derived from alignment at KK037252.1:427532..428239- (Nannochloropsis gaditana)
ACAGGCACGCTTGCTATTTTCAGACGAAGTTTCGCCGCGCCCTCCCCAAA
ACCATTCGCCCGCCACCCTAGCGGCATCTTTGCGCCGTTGATCGGCGGGG
GAAGGAGTGGACGCACTGGGTGGTCAGTGGCCTATGCAGCAACCACGCCG
ACGGACGTCGTACCCACCGCCGCCCCCTATGTCCTATCCACGACCCCTAT
ATCACCGCTACGAAGCACGGCACCCCCATGCACCTCGACATTACCGCGTG
CCGCCACCACCACAAGCTTCCCCCGGATGGGTAACCGCCACCAGCCACGC
CCCACGGGAACTGGTTGGGCTCCCCTACCCCGACTATCCTCGCGAGGGAG
AGTGGGTACTGTCGTTGGAGCAGGTAGGTAGGTGGTATCGGGCGACGTTC
ATGTCCTTAACGTCCTACTTCTCGACTGTCCTTTCGCATGCCTCCCTGTC
CTTCTCTTGCCTCTCCTCTTTCGAGGGAACCTGTCTCATCTCCCTCCCTT
CCCTCCCTCGTTCCCTCCCTCCCTCCCTCCCTCCCTCGCCCCCTCGATCC
CTCCCTCAGCTTTACCTGCAGTCTCCTTCCCGCCGAGACGGTCTCTCCGA
TGCCCAAGAACGGGAGCGACGACATGATGGGGCTGCCTTGATCGACAGAA
TGGCGCGTCGGCTAGATCTGTAGGGGGGGAGGGAGGGAGGGAAGGAGGGA
GGAAGGGA
back to top

Coding sequence (CDS) from alignment at KK037252.1:427532..428239-

>rna9337 ID=rna9337|Name=rna9337|organism=Nannochloropsis gaditana|type=CDS|length=708bp|location=Sequence derived from alignment at KK037252.1:427532..428239- (Nannochloropsis gaditana)
CTTTACCTGCAGTCTCCTTCCCGCCGAGACGGTCTCTCCGATGCCCAAGA
ACGGGAGCGACGACATGATGGGGCTGCCTTGATCGACAGAATGGCGCGTC
GGCTAGATCTGTAGATGCAGCAACCACGCCGACGGACGTCGTACCCACCG
CCGCCCCCTATGTCCTATCCACGACCCCTATATCACCGCTACGAAGCACG
GCACCCCCATGCACCTCGACATTACCGCGTGCCGCCACCACCACAAGCTT
CCCCCGGATGGGTAACCGCCACCAGCCACGCCCCACGGGAACTGGTTGGG
CTCCCCTACCCCGACTATCCTCGCGAGGGAGAGTGGGTACTGTCGTTGGA
GCAGCTTTACCTGCAGTCTCCTTCCCGCCGAGACGGTCTCTCCGATGCCC
AAGAACGGGAGCGACGACATGATGGGGCTGCCTTGATCGACAGAATGGCG
CGTCGGCTAGATCTGTAGATGCAGCAACCACGCCGACGGACGTCGTACCC
ACCGCCGCCCCCTATGTCCTATCCACGACCCCTATATCACCGCTACGAAG
CACGGCACCCCCATGCACCTCGACATTACCGCGTGCCGCCACCACCACAA
GCTTCCCCCGGATGGGTAACCGCCACCAGCCACGCCCCACGGGAACTGGT
TGGGCTCCCCTACCCCGACTATCCTCGCGAGGGAGAGTGGGTACTGTCGT
TGGAGCAG
back to top
Synonyms
Publications