rna9321, rna9321 (mRNA) Nannochloropsis gaditana

Overview
Namerna9321
Unique Namerna9321
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length647
Alignment locationKK037252.1:377857..378966 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100595g1.1490.mrna
Orig protein idgnl|cribi|Naga_100595g1.1490
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:377857..378966 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100595g1gene9037Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9321rna9321-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21383.1cds9291Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9321 ID=rna9321|Name=rna9321|organism=Nannochloropsis gaditana|type=mRNA|length=647bp
ACCCTGCGAGCGGCGCATGCCTCCCGAGGCCTTCCAGAGTGATCACTAAG
AGCTTTGTTGTGTGACGTCAGACATGTCGGCATTTTTATACGGGGGAAAG
GGCGGCCAAGCTCACCAAGCGTTTCTCCCTCACCCTCAGCAGAAAGGAGG
AGCAAGGACAGGAAGGCGCTAAAGTACGGGGGTGCATCCACACAAATCAT
CGCATCCTCCTTCGTCTGACCTTCATTTAGGCCTCTTTTTTGCCTGCATC
GGTGCAGCAGTGGTGTGATTGCAGAGGGTTTCACGGAGCGCGCTTCCTTG
GGCAGACAAGGAATGGCTTCGGGAACGACGAAGCTAACCTTGTCGACGCA
AGACTACGTGAAAGTGAAGACGGTGGGAGGCGAAGTCTTGCAAGGACGTG
TGCATGCCTTGTGTGAGAGCACCAGCACGTTGGTCATTCGCCTGGCCGGA
GCGGGTACCTCAGGTGGGAAGGAGGGAGAGAGGGAGGGAGTGGGGGAGGG
GGGGGGGAGTGAGGGAGTGAGGGAGGGAGGGAAGGATAGGCACACTCCGC
AGACGGCTTTTGAAGACGATCAGGAGGCTCTCAGAGGCGCAAAGGGTACC
AAGGGCTGCTGGGCAAAAAGGTGCTTGTCCTCCCTGCACGGATCCAT
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protein sequence of rna9321

>rna9321-protein ID=rna9321-protein|Name=rna9321|organism=Nannochloropsis gaditana|type=polypeptide|length=213bp
MGQGLEEKSVAPVSPSESHFQICFVLLPLEPFSPSLPPSLRLPFLNAPPA
APPRLVRTTANATVRSIKIFVAARLQLESAAFLDLSVWVHCSLPFLKASP
SQSSSSSFSPLQVREEGDGGRESQRNLGQGTIKKVEAGAPQVKETDGGKT
RNGSVKGKDSDLMTEGKRQGRRVILDDALTLGDVIEYFWSLNVSEELCLY
YTVRTQGMAGRFW
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mRNA from alignment at KK037252.1:377857..378966+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9321 ID=rna9321|Name=rna9321|organism=Nannochloropsis gaditana|type=mRNA|length=1110bp|location=Sequence derived from alignment at KK037252.1:377857..378966+ (Nannochloropsis gaditana)
cctttttctcgccAAGTCCCTCTGTTGgtgtctcccctcctccgtcgccc
tttgttcctgctccccccaccgcctccacggaCACGGAGGGTTCGCTGCC
CGGAGGGGTCACcttggggaagaggaaaatgggccaaggcctggaagaaa
aaagcgTCGCGCCGGTGTCGCCTTCCGAGGtacggaaggagggctggtgC
GTGGGTGAGAAGAACTTtaaggggggagagaggaagggaagggttgTGAT
TTGTTTCCTTGTTACGTCATTCTCAcccatccttcttccttgtcgtcACT
TACATTTTTCTCCTATTTCCAACCCACTTTTCCCTTTAACTTCAACCAAT
CAAGTCCCACTTCCAAATCTGCtttgttcttcttcccctcgagcccttct
cgccctccttgcctccctccctgcgtcttcccttcctgaacgcccccccc
gcagctcctccccgcctggtGCGAACAACCGCCAATGCAACAGTCAGGAG
TATCAAGATCTTCGTCGCCGCTCGTCTCCAGCTGGAGTCAGCAGCTTTTC
TCGACCTGTCTGTGTGGGTGCATTGTTCGTTGCCCTTTCTAAAAGCTTCC
CCTTCTcagtcttcttcttcttctttctctccccttcaagtgagggagga
gggcgacgggggaAGAGAATCTCAGAGAAATCTCGGTCAAGGAACTATAA
AAAAGGTTGAAGCGGGAGCACCACAAGTAAAAGAGACGGATGGAGGCAAG
ACGCGGAATGGATCTGTAAAGGGGAAGGATAGTGATTTGATGACAGAGGG
GAAACGACAGGGCCGACGCGTCATCCTGGACGACGCCTTGACGCTTGGAG
ATGTGATAGAGTATTTCTGGAGCTTGAACGTCAGCGAGGAGTTATGCTTG
TACTACACTGTGCGGACACAGGGAATGGCGGGACGTTTTtggtgaggaga
gggagggtaagggaaggaaaacggagggtggaaaggaggaacagTATGTT
GTGGAGAGCAGTGTATGGATTAATCCTGTGTCCATTACATCCCAATAATG
TATTTACACATTTCTGTAAGGATGATCTGTGTATTAACAAAGAAATATGT
AACGAGCTGA
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Coding sequence (CDS) from alignment at KK037252.1:377857..378966+

>rna9321 ID=rna9321|Name=rna9321|organism=Nannochloropsis gaditana|type=CDS|length=1284bp|location=Sequence derived from alignment at KK037252.1:377857..378966+ (Nannochloropsis gaditana)
atgggccaaggcctggaagaaaaaagcgTCGCGCCGGTGTCGCCTTCCGA
GTCCCACTTCCAAATCTGCtttgttcttcttcccctcgagcccttctcgc
cctccttgcctccctccctgcgtcttcccttcctgaacgccccccccgca
gctcctccccgcctggtGCGAACAACCGCCAATGCAACAGTCAGGAGTAT
CAAGATCTTCGTCGCCGCTCGTCTCCAGCTGGAGTCAGCAGCTTTTCTCG
ACCTGTCTGTGTGGGTGCATTGTTCGTTGCCCTTTCTAAAAGCTTCCCCT
TCTcagtcttcttcttcttctttctctccccttcaagtgagggaggaggg
cgacgggggaAGAGAATCTCAGAGAAATCTCGGTCAAGGAACTATAAAAA
AGGTTGAAGCGGGAGCACCACAAGTAAAAGAGACGGATGGAGGCAAGACG
CGGAATGGATCTGTAAAGGGGAAGGATAGTGATTTGATGACAGAGGGGAA
ACGACAGGGCCGACGCGTCATCCTGGACGACGCCTTGACGCTTGGAGATG
TGATAGAGTATTTCTGGAGCTTGAACGTCAGCGAGGAGTTATGCTTGTAC
TACACTGTGCGGACACAGGGAATGGCGGGACGTTTTtggtgaatgggcca
aggcctggaagaaaaaagcgTCGCGCCGGTGTCGCCTTCCGAGTCCCACT
TCCAAATCTGCtttgttcttcttcccctcgagcccttctcgccctccttg
cctccctccctgcgtcttcccttcctgaacgccccccccgcagctcctcc
ccgcctggtGCGAACAACCGCCAATGCAACAGTCAGGAGTATCAAGATCT
TCGTCGCCGCTCGTCTCCAGCTGGAGTCAGCAGCTTTTCTCGACCTGTCT
GTGTGGGTGCATTGTTCGTTGCCCTTTCTAAAAGCTTCCCCTTCTcagtc
ttcttcttcttctttctctccccttcaagtgagggaggagggcgacgggg
gaAGAGAATCTCAGAGAAATCTCGGTCAAGGAACTATAAAAAAGGTTGAA
GCGGGAGCACCACAAGTAAAAGAGACGGATGGAGGCAAGACGCGGAATGG
ATCTGTAAAGGGGAAGGATAGTGATTTGATGACAGAGGGGAAACGACAGG
GCCGACGCGTCATCCTGGACGACGCCTTGACGCTTGGAGATGTGATAGAG
TATTTCTGGAGCTTGAACGTCAGCGAGGAGTTATGCTTGTACTACACTGT
GCGGACACAGGGAATGGCGGGACGTTTTtggtga
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Synonyms
Publications