rna9252, rna9252 (mRNA) Nannochloropsis gaditana

Overview
Namerna9252
Unique Namerna9252
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1318
Alignment locationKK037252.1:206579..207646 -

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Properties
Property NameValue
Productn-alpha-acetyltransferase catalytic subunit
Orig transcript idgnl|cribi|Naga_100019g18.472.mrna
Orig protein idgnl|cribi|Naga_100019g18.472
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:206579..207646 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100019g18gene8974Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21450.1cds9222Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9252rna9252-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9252 ID=rna9252|Name=rna9252|organism=Nannochloropsis gaditana|type=mRNA|length=1318bp
TCAACGGTTCGCAACGGTCTCGAGGCTACGTTCCACTCACCTGATATCTA
ATCACTTTGTATAGTCTTACAATAGATATGGCCCGACGTCGGCATGGACT
CGAGCACCCGCTTGGTACATTACAAATGCTGGCATGGGGAGCCTTTCTGT
TCACAGCAGCAAGCTTCTTATTGATCATGCCTTCCCGCTTCAATCCGTAT
TCGTTCGCATTACCTTCTATCCTAGGATTTTGTTTGCTGTTGACCCTGAT
TGCAGGTATCTATACCACACTTATTGACCCATGCGATGAGGCTCTTTTAC
GTATGGCGCCATGTGATAAGGAAAGTCATGACGTACTCGATCGAAGTGTT
GATCAACAGCAACAAGAGCAGCAGCAAGAGAGAGTGTACTGCTACATTTG
CCAAGCAAGCGTTGGCAGAGGAACGGCGCATTGTAGACAGTGCAACAAGT
GTATAGCAGGCTTTGATCAACATTGTGCATGGCTTAACACGTGTATCGGG
CAGCGAAACTATCTTCCTTTTATCTGCACGCTGTGGTGTGCCTTCTCGGT
GACAATCCTTCAGGCCAGCATGAGCTTTGTTATTCTTGTACAATGGATGG
CTTACGGATCAAATGCCCGTATATTTTCATCTATCACGCTTCCCGTGAAA
GTTTACATTTTTTTAACTGTGATTGTAGGAACCTCATCTTCTATCATAAG
CTTCTTGCTTGGGCAGATGCTCCTATTCCACCTGTTCTTATCTATTCACG
AGATGACGAGCTATCAGTACGTAATCCTTCAGAGCCAACGGGAGCGGAGC
CACGAAGAGAGAGAAGCGGCAAATCGCGAACTCGTGAAAATGATGAAAAC
AAAGCATTCTACGGACGCGGTCGTAAGTGCATCCTCGTCACTACCACCAT
CAGAGTCTTCTTCACCTACAGAGCCTCCATGTACAGCATCGTCTCTGTCC
TCGCGTTGGCGATTCCCTAAAGAAATTGTCCTGTCACGGCTACCACCGGC
ATTACCCTCGCCACGAGGCCTCAGCTTCTTGTCCAAGAGGGACGTGGCCC
CGTCCAGTCTGCCGGGAGACGTGTTTTTGGCGGCGGACGAGGAAGATGAC
GAGGGGATGAGAGACGATGACGCGGTTGTCATCCACTTTTGAACATTAAA
TCGAAATACGACTAAACGCAATGTAAAAAGCCCATTGGAGCGCGCAGGAA
CTTGCCAGAAATTTACTTATTCTATCAGTCGTCGAGTCCTGAGACAGGAG
GCCGCTCAAGAAGCAGCCAATTTCTTGTCTTCCTCAGCCACATCTTTAGA
AAGGATCTCATAACACTC
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protein sequence of rna9252

>rna9252-protein ID=rna9252-protein|Name=rna9252|organism=Nannochloropsis gaditana|type=polypeptide|length=273bp
MGAGKKARAKERKTGKLAMAAQAELTAKAVALLPSGMENLGVFDTLSEVP
LENDTSNGPTNTVHQPMSSSDQEAPNLHHRQGCDQHGPAVQIVYHTRSTL
PPSWKEPLFSLFKSNMKEQYESNWGYREAEKRSEIFSQESRYLIAVQTSP
GDGEAQGEGTPVGFVHIRYVLDRDEEIPTAVLYVYEIQLAPSVQRRGLGA
RMMSVVESMAVKLKMRKIKLTVFKSNGAALAFYLNKLGYDVDGTSPSQHK
ILGECYEILSKDVAEEDKKLAAS
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mRNA from alignment at KK037252.1:206579..207646-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9252 ID=rna9252|Name=rna9252|organism=Nannochloropsis gaditana|type=mRNA|length=1068bp|location=Sequence derived from alignment at KK037252.1:206579..207646- (Nannochloropsis gaditana)
GCACTCAAGCATAGAACAATCGGAATACGATTTAACACCACCGTCTCCCA
GGGAGCTTCTCGCCGAGGCGTTACACGCGACATTTGAGCGATGCCGGCAA
CTTCCTTCTTGCTCCTTTCCCGCCGCAGCAAGTTTTCAAAATACTCCGGC
TCGACTCATCGGATACATGTAATCAACTCACGGCAGCATGGGTGCGGGCA
AGAAAGCTCGTGCCAAAGAGCGCAAGACGGGAAAGCTGGCTATGGCTGCA
CAGGCGGAATTGACCGCGAAGGCAGTGGCACTCCTCCCATCAGGCATGGA
AAACCTTGGAGTATTCGACACCTTGAGCGAGGTACCTTTGGAAAACGACA
CCTCAAATGGGCCTACAAATACGGTTCATCAGCCCATGTCCAGCAGCGAC
CAAGAAGCGCCAAATCTGCACCACCGCCAGGGATGCGATCAGCATGGACC
TGCCGTACAGATCGTCTACCACACGCGGTCAACTTTACCTCCCTCATGGA
AGGAGCCCTTATTCTCTCTTTTTAAATCTAACATGAAAGAGCAGTATGAG
AGCAATTGGGGCTACCGAGAGGCGGAAAAAAGAAGCGAGATTTTTTCGCA
AGAGTCTCGGTACCTTATTGCCGTCCAGACTTCTCCAGGAGACGGCGAGG
CGCAGGGTGAGGGCACGCCGGTGGGTTTCGTGCACATCCGCTATGTTCTG
GATAGAGACGAAGAGATTCCAACAGCAGTTTTGTACGTATACGAGATTCA
GCTGGCTCCAAGCGTGCAACGGCGAGGATTAGGTGCTCGCATGATGAGCG
TTGTAGAAAGCATGGCGGTAAAATTGAAAATGAGAAAAATAAAGCTTACG
GTTTTCAAAAGCAACGGTGCAGCCCTCGCCTTTTATCTCAATAAATTGGG
ATACGATGTTGATGGGACGTCGCCGAGTCAACACAAAATTTTGGGTGAGT
GTTATGAGATCCTTTCTAAAGATGTGGCTGAGGAAGACAAGAAATTGGCT
GCTTCTTGAGCGGCCTCCTGTCTCAGGACTCGACGACTGATAGAATAAGT
AAATTTCTGGCAAGTTCC
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Coding sequence (CDS) from alignment at KK037252.1:206579..207646-

>rna9252 ID=rna9252|Name=rna9252|organism=Nannochloropsis gaditana|type=CDS|length=822bp|location=Sequence derived from alignment at KK037252.1:206579..207646- (Nannochloropsis gaditana)
ATGGGTGCGGGCAAGAAAGCTCGTGCCAAAGAGCGCAAGACGGGAAAGCT
GGCTATGGCTGCACAGGCGGAATTGACCGCGAAGGCAGTGGCACTCCTCC
CATCAGGCATGGAAAACCTTGGAGTATTCGACACCTTGAGCGAGGTACCT
TTGGAAAACGACACCTCAAATGGGCCTACAAATACGGTTCATCAGCCCAT
GTCCAGCAGCGACCAAGAAGCGCCAAATCTGCACCACCGCCAGGGATGCG
ATCAGCATGGACCTGCCGTACAGATCGTCTACCACACGCGGTCAACTTTA
CCTCCCTCATGGAAGGAGCCCTTATTCTCTCTTTTTAAATCTAACATGAA
AGAGCAGTATGAGAGCAATTGGGGCTACCGAGAGGCGGAAAAAAGAAGCG
AGATTTTTTCGCAAGAGTCTCGGTACCTTATTGCCGTCCAGACTTCTCCA
GGAGACGGCGAGGCGCAGGGTGAGGGCACGCCGGTGGGTTTCGTGCACAT
CCGCTATGTTCTGGATAGAGACGAAGAGATTCCAACAGCAGTTTTGTACG
TATACGAGATTCAGCTGGCTCCAAGCGTGCAACGGCGAGGATTAGGTGCT
CGCATGATGAGCGTTGTAGAAAGCATGGCGGTAAAATTGAAAATGAGAAA
AATAAAGCTTACGGTTTTCAAAAGCAACGGTGCAGCCCTCGCCTTTTATC
TCAATAAATTGGGATACGATGTTGATGGGACGTCGCCGAGTCAACACAAA
ATTTTGGGTGAGTGTTATGAGATCCTTTCTAAAGATGTGGCTGAGGAAGA
CAAGAAATTGGCTGCTTCTTGA
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Synonyms
Publications