EWM21456.1, cds9196 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21456.1 vs. NCBI_GenBank
Match: gi|585101686|gb|EWM21456.1| (Protein of unknown function DUF2358 [Nannochloropsis gaditana]) HSP 1 Score: 660.218 bits (1702), Expect = 0.000e+0 Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0 Query: 1 MERDMYRPDVEFVDPLTRLRGVDSYQRNVDMLGSRTLLGGILFSDAGIVLHNIEDLGPRKLLTRWTLRLRAKVLPWGPMARFTGVSLYDLDEQARVVRQTDYWDSINLVEGEYRPAPLLTGLKDFLKQLAPGAGGAQQAMNAELPFELLRRAPEYEVRRYPAFEAVETNYNTRPEGYDRLGTYASGWNVENRKFKPFSPSIMRIDKNEKDKTMMWPVGFSNEDLDQVGGVVSSQAIPAPADEIIRRTSVPVQVVAVLRFEVPATAPVVKYYASRLVELLAADELVPTPAAAQTYTLCQYDAIFSVGTRRNEVWAVLEKHDWQI 323 MERDMYRPDVEFVDPLTRLRGVDSYQRNVDMLGSRTLLGGILFSDAGIVLHNIEDLGPRKLLTRWTLRLRAKVLPWGPMARFTGVSLYDLDEQARVVRQTDYWDSINLVEGEYRPAPLLTGLKDFLKQLAPGAGGAQQAMNAELPFELLRRAPEYEVRRYPAFEAVETNYNTRPEGYDRLGTYASGWNVENRKFKPFSPSIMRIDKNEKDKTMMWPVGFSNEDLDQVGGVVSSQAIPAPADEIIRRTSVPVQVVAVLRFEVPATAPVVKYYASRLVELLAADELVPTPAAAQTYTLCQYDAIFSVGTRRNEVWAVLEKHDWQI Sbjct: 1 MERDMYRPDVEFVDPLTRLRGVDSYQRNVDMLGSRTLLGGILFSDAGIVLHNIEDLGPRKLLTRWTLRLRAKVLPWGPMARFTGVSLYDLDEQARVVRQTDYWDSINLVEGEYRPAPLLTGLKDFLKQLAPGAGGAQQAMNAELPFELLRRAPEYEVRRYPAFEAVETNYNTRPEGYDRLGTYASGWNVENRKFKPFSPSIMRIDKNEKDKTMMWPVGFSNEDLDQVGGVVSSQAIPAPADEIIRRTSVPVQVVAVLRFEVPATAPVVKYYASRLVELLAADELVPTPAAAQTYTLCQYDAIFSVGTRRNEVWAVLEKHDWQI 323
BLAST of EWM21456.1 vs. NCBI_GenBank
Match: gi|922869398|gb|KOO35532.1| (heme-binding-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 253.447 bits (646), Expect = 1.336e-78 Identity = 139/340 (40.88%), Postives = 189/340 (55.59%), Query Frame = 0 Query: 4 DMYRPDVEFVDPLTRLRGVDSYQRNVDMLGSRTLLGGILFSDAGIVLHNIEDLGPRKLLTRWTLRLRAKVLPWGPMARFTGVSLYDLDEQARVVRQTDYWDSINLVEG-EYRPAPLLTGLKDFLKQLAPGAGGAQQAMNAELPFELLRRAPEYEVRRYPAFEAVETNYNTRPEGYDRLGTYASGWNVENRKFKPFSPSIMRIDKN-----------------EKDKTMMWPVGFSNEDLDQVGGVVSSQAIPAPADEIIRRTS---VPVQVVAVLRFEVPATAPVVKYYASRLVELLAADELVPTPAA-AQTYTLCQYDAIFSVGTRRNEVWAVLEKHDW 321 + Y P+V F DPL G++ Y+ NVDML +T LG F+D G+ +H I++ P L TRWTL+ R K+LPW P+A+FTGVS Y LD RV+ Q DYWDSINL +G Y L LKDF+ QL P GA+QA + ELP+ LLRRA +YEVRRYP AV TNY R + + LG Y +G N + + K + PS+M + ++ EK K M WP+ + A P P + ++ VP +VVA +F P T P+V+ Y + L + L D L P+ + + L Q+DA+ S G RR+EVW LE+H W Sbjct: 38 EFYNPEVSFADPLISFTGLEKYKNNVDMLAGKTPLGKACFTDCGLAMHGIKET-PTGLQTRWTLQFRFKLLPWAPLAQFTGVSKYTLDANKRVLAQQDYWDSINLQKGGAYAAVSKLDALKDFVGQLQPSGSGARQASDKELPYVLLRRAKDYEVRRYPQHVAVSTNYYRRIDAFGTLGAYTNGANEQEKALKAYVPSLMSVQQDSRTLAQITDDALDLKPSEKPKVMRWPMAVP---------AMREPAPPQPTERLMGACELELVPSRVVACYKFSDPTTEPIVRGYHALLAKRLREDGLKPSDGVPEEQFRLAQFDALNSFGARRSEVWIDLEEHPW 367
BLAST of EWM21456.1 vs. NCBI_GenBank
Match: gi|1210529445|dbj|GAX12079.1| (hypothetical protein FisN_8Lh183 [Fistulifera solaris]) HSP 1 Score: 242.276 bits (617), Expect = 6.140e-74 Identity = 143/334 (42.81%), Postives = 184/334 (55.09%), Query Frame = 0 Query: 1 MERDMYRPDVEFVDPLTRLRGVDSYQRNVDMLGSRTLLGGILFSDAGIVLHNIE----DLGPR-----KLLTRWTLRLRAKVLPWGPMARFTGVSLYDL----DEQARVVRQTDYWDSINL-VEGEYRPAPLLTGLKDFLKQLAPGAGGAQQAMNAELPFELLRRAPEYEVRRYPAFEAVETNYNTRPEGYDRLGTYASGWNVENRKFKPFSPSIMRIDKNEKDKTMMWPVGFSNEDLDQVGGVVSSQAIPAPADEIIRRTSVPVQVVAVLRFEVPATAPVVKYYASRLVELLAADELVPTPAAAQTYTLCQYDAIFSVGTRRNEVWAVLEKHD 320 MER Y DV F DPLT L G+D YQ NVDML RTLLG ILFSDA I LH++ + P+ ++TRWTLR K LPW P ARF+G+S+Y + E +V+Q DYWDSINL +G YR GL DFL QL P A A ELPFELLRR YEVRRYP + A + Y R EGY LG++ G +P +P+I+ +D + +K+MMWP+ F+ + G + A + +P VVAV RF + PVV+ + L D L + + A + CQYDAIFS+G RR EVW L+ + Sbjct: 73 MERQYYSSDVTFQDPLTSLAGIDKYQDNVDMLSGRTLLGSILFSDASINLHSVRGGEISVDPQGTQISDIVTRWTLRFCFKALPWKPTARFSGISVYRVRVGGSEGVEIVQQNDYWDSINLQSDGTYRAVDKSVGLSDFLDQLKPSDINAPSA-GPELPFELLRRGNGYEVRRYPQYSAAKLAYERRDEGYSVLGSFCKG-------LQPMAPAILTVDSQKDEKSMMWPLTFA-----RPGQTFELPSTNNRAGRGVEVVVIPSSVVAVARFSDASVEPVVRKATNLLRNACERDGLKLSRSEALQF--CQYDAIFSMGKRRGEVWIPLDDDN 391
BLAST of EWM21456.1 vs. NCBI_GenBank
Match: gi|1210522201|dbj|GAX18963.1| (hypothetical protein FisN_8Hh183 [Fistulifera solaris]) HSP 1 Score: 239.58 bits (610), Expect = 7.899e-73 Identity = 144/335 (42.99%), Postives = 185/335 (55.22%), Query Frame = 0 Query: 1 MERDMYRPDVEFVDPLTRLRGVDSYQRNVDMLGSRTLLGGILFSDAGIVLHNIE--DLGP--------RKLLTRWTLRLRAKVLPWGPMARFTGVSLYDL----DEQARVVRQTDYWDSINL-VEGEYRPAPLLTGLKDFLKQLAPGAGGAQQAMNAELPFELLRRAPEYEVRRYPAFEAVETNYNTRPEGYDRLGTYASGWNVENRKFKPFSPSIMRIDKNEKDKTMMWPVGFSNEDLDQVGGVVSSQAIPAPADEIIRRTSVPVQVVAVLRFEVPATAPVVKYYASRLVELLAADELVPTPAAAQTYTLCQYDAIFSVGTRRNEVWAVLEKHD 320 ME+ Y DV F DPLT L G+D YQ NVDML RTLLG ILFSDA I LH+++ D+ ++TRWTLR K LPW P ARF+G+S+Y + E ++V+Q DYWDSINL +G YR GL DFL QL P A A ELPFELLRR YEVRRYP + A + Y R EGY LG++ G +P +P+I+ +D + K+MMWP+ F+ Q V + E++ +P VVAV RF + PVV+ + L D L T + A + CQYDAIFS+G RR EVW L+ + Sbjct: 72 MEKQYYSSDVTFQDPLTSLAGIDKYQDNVDMLSGRTLLGSILFSDASINLHSVKGGDISVDSQGTTQISDIVTRWTLRFCFKALPWKPTARFSGISVYQVRTGGSEGVQIVQQNDYWDSINLQSDGTYRAVDKSVGLSDFLDQLKPSDINAPSA-GPELPFELLRRGNGYEVRRYPQYSAAKLAYERRDEGYSILGSFCKG-------LQPMAPAILTVDSQKDQKSMMWPLTFARP--GQTFEVPPTNNREGRGVEMV---VMPSSVVAVARFSDASVEPVVRKATNLLRNACERDGLKLTRSEALQF--CQYDAIFSMGKRRGEVWIPLDDDN 391
BLAST of EWM21456.1 vs. NCBI_GenBank
Match: gi|219128484|ref|XP_002184442.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404243|gb|EEC44191.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 238.039 bits (606), Expect = 2.470e-72 Identity = 140/345 (40.58%), Postives = 188/345 (54.49%), Query Frame = 0 Query: 1 MERDMYRPDVEFVDPLTRLRGVDSYQRNVDMLGSRTLLGGILFSDAGIVLHNIE------DLGPRKLLTRWTLRLRAKVLPWGPMARFTGVSLYDLDEQAR----VVRQTDYWDSINLVE-GEYRPAPLLTGLKDFLKQLAPGAGGAQQAMNAELPFELLRRAPEYEVRRYPAFEAVETNYNTRPEGYDRLGTYASGWNVENRKFKPFSPSIMRIDKNEKDKTMMWPVGFSNEDLDQVGGVVSSQAIPAPADEI----------IRRTSVPVQVVAVLRFEVPATAPVVKYYASRLVELLAADELVPTPAAAQTYTLCQYDAIFSVGTRRNEVWAVLE--KHDWQ 322 ME Y P V F+DP+T GV++Y+RNVDML +RT +G LF DAGIVLH++E D + TRWTLRL AK+LPW P ARF+G+S+Y + R +++Q+D+WDSIN+ E G Y+ + DFL QL P A A AELP++LLRR YEVRRYP+ AVE NY R +G+ LG++ +G +P +P++M I KTMMWP+ F+ S P PA + R +VP +VVAV F + PVV+ L ++ D + ++ QYDAIFS+G RR EVW LE H W Sbjct: 70 METQFYSPSVSFIDPMTSFTGVENYKRNVDMLAARTSMGKFLFKDAGIVLHSVEGGALKSDGSIEDICTRWTLRLTAKILPWSPTARFSGISVYQVKAGGRKGVEIIKQSDFWDSINIQEGGTYKEVNKGLAISDFLSQLKPEDLAAPSA-GAELPYQLLRRGNGYEVRRYPSHNAVEINYERRDDGFSMLGSFTNG-------MEPLAPALMAI-PCAGSKTMMWPLDFA---------APGSDYPPKPAAALEKANDGLWNDCRIVTVPEKVVAVRLFSNASVEPVVRQADKELRDVCLRDGIGIPLSSESLLQFAQYDAIFSMGKRRTEVWIDLEDSSHPWS 396
BLAST of EWM21456.1 vs. NCBI_GenBank
Match: gi|1072230437|gb|OEU15170.1| (hypothetical protein FRACYDRAFT_208732 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 224.172 bits (570), Expect = 1.318e-66 Identity = 135/351 (38.46%), Postives = 186/351 (52.99%), Query Frame = 0 Query: 1 MERDMYRPDVEFVDPLTRLRGVDSYQRNVDMLGSRTLLGGILFSDAGIVLHNIE-------DLGPRKLLTRWTLRLRAKVLPWGPMARFTGVSLYDLDEQ-----ARVVRQTDYWDSINLV--EGEYRPAPLLTGLKDFLKQLAPGAGGAQQAMNAELPFELLRRAPEYEVRRYPAFEAVETNYNTRPEGYDRLGTYASGWNVENRKFKPFSPSIMRI--DKNEKDKTMMWPVGFSNEDLDQVGGVVSSQAIPAPADEIIRRTSVPV-----------QVVAVLRFEVPATAPVVKYYASRLVELLAADELVPTPAAAQTYTLCQYDAIFSVGTRRNEVWAVLEK---HDW 321 M+ + Y DV FVDP+T L GV+ Y+ NVDML SRTL G LF+DAGI+LH++E D + TRWTL++ LPW P ARFTG+S+Y++ E +V +Q D+WDSIN+V +GEY + DFL QL P G A + E+P+ELLRR +YE+RRYP Y R E +D LG+ G +P SP++M + D N K KTM WP+ + + S +IP +I+ + P+ +VVAV F + AP+V+ RL E ++ D ++ + QYDAIFS+G RR EVW L H W Sbjct: 83 MQCEYYSNDVTFVDPMTSLTGVEKYKGNVDMLASRTLFGKFLFADAGIILHSVEGGDVSLSDGSISNITTRWTLKVTVTKLPWTPTARFTGISVYEVSEDPEGVLVKVNKQIDFWDSINIVGTQGEYGKVDKSIAIADFLDQLKPQNGNAAASFT-EMPYELLRRGKDYEIRRYPEHTTAVVPYTRRDEAFDLLGSLTKG-------IEPLSPALMTVPNDDNAK-KTMAWPLLYKSP---------SESSIPQVPQKILDKFQDPIWSDCEIETVGSKVVAVGTFRDASVAPIVRKADRRLREAISRDGILIPSESDSFVKFAQYDAIFSLGKRRGEVWLELNSITGHPW 415
BLAST of EWM21456.1 vs. NCBI_GenBank
Match: gi|223999213|ref|XP_002289279.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974487|gb|EED92816.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 221.09 bits (562), Expect = 6.963e-66 Identity = 138/342 (40.35%), Postives = 183/342 (53.51%), Query Frame = 0 Query: 1 MERDMYRPDVEFVDPLTRLRGVDSYQRNVDMLGSRTLLGGILFSDAGIVLHNIE----------DLGPRKLLTRWTLRLRAKVLPWGPMARFTGVSLYDL----DEQARVVRQTDYWDSINLVEG--------EYRPAPLLTGLKDFLKQLAPGAGGAQQAMNA-ELPFELLRRAPEYEVRRYPAFEAVETNYNTRPEGYDRLGTYASGWNVENRKFKPFSPSIMRI---DKNEKDKTMMWPVGFS--NEDLDQVGGVVSSQAIPAPADE--IIRRTSVPVQVVAVLRFEVPATAPVVKYYASRLVELLAADELVPTPAAAQTYTLCQYDAIFSVGTRRNEV 312 M Y PDV F DP+T L GVDSYQ NVDML RTL+G +LF AGI LH++ + +++TRWTL++ AKVLPW P A F+G+S+Y + E + QTDYWDSIN+ G +Y+ P ++DFL QL P G Q A A ELP+ LLRR YEVRRYP F T Y R G+ LG++ +G N ++PS+M++ D + KDK M WP+ +S E D + A + + TS P +VVAV FE A PVV+ L LL D L+P ++ QYDA+ S+G RR+EV Sbjct: 38 MVTSWYAPDVTFDDPMTSLSGVDSYQNNVDMLAGRTLMGKLLFDGAGINLHSVTGGEVSEGNNGQVQIAEIVTRWTLKVTAKVLPWKPEAVFSGISVYQVKPGGKEGVLIAHQTDYWDSINIKPGTSSTDAQKQYQKVPTSVAVQDFLGQLKP--DGFQAAAAAPELPYLLLRRGNGYEVRRYPGFVGASTTYQRRDFGFGSLGSFTAGMNA-------YAPSLMKVWNNDNDAKDKVMTWPLEYSAPGEGTDAPAPPALAVAKAEEGGQWKSVTITSQPERVVAVRTFEDAAMGPVVRNCDRELRVLLTRDGLIPVEDTSEYVIFAQYDAVHSMGKRRSEV 370
BLAST of EWM21456.1 vs. NCBI_GenBank
Match: gi|397639755|gb|EJK73742.1| (hypothetical protein THAOC_04617, partial [Thalassiosira oceanica]) HSP 1 Score: 195.667 bits (496), Expect = 1.483e-53 Identity = 121/322 (37.58%), Postives = 169/322 (52.48%), Query Frame = 0 Query: 25 YQRNVDMLGSRTLLGGILFSDAGIVLHNIE---------DLGPRKLLTRWTLRLRAKVLPWGPMARFTGVSLYDLD----EQARVVRQTDYWDSINLVEG--------EYRPAPLLTGLKDFLKQLAPGAGGAQQAMNAELPFELLRRAPEYEVRRYPAFEAVETNYNTRPEGYDRLGTYASGWNVENRKFKPFSPSIMRIDKNE-----KDKTMMWPVGFSNEDLDQVGGVVSSQAIPAPAD---EIIRRTSVPVQVVAVLRFEVPATAPVVKYYASRLVELLAADELVPTPAAAQTYTLCQYDAIFSVGTRRNEVWAVLE 317 +Q NVDML RTL+G +LF AGI+LH++ ++ ++TRWTLR+ AKVLPW P A F+G+S+Y + E ++V QTD+WDSIN+ EG +Y+ P T ++ FL QL P G + E+P+ LLR YE+RRYP F +T Y R GY LG ++ G + P +PSI R+ +E +KTM WP+ ++ + +A D +R P VVAV FE A APVV+ L E+L D LV + CQYDA+ S+G RR+EVW L+ Sbjct: 351 HQNNVDMLAGRTLMGKVLFEGAGIILHSVTGGEIVERNGEVAVDDIITRWTLRVTAKVLPWTPEAVFSGISVYKVQPGGPEGLQIVGQTDFWDSINIAEGTDSLNAKEQYQEVPKPTAVQHFLDQLKP-EGFVAPSAAVEVPYVLLRAGDGYEIRRYPGFVGAQTTYERRDVGYGSLGAFSKGMD-------PLAPSICRVYNDEDSAEPTEKTMTWPLRYAAPGSGREAPEAPPEAAAKAGDGQWRTVRLVPQPETVVAVRAFEDFAMAPVVRKADRELREMLRRDGLVAEEGSGDFVRFCQYDAVHSMGKRRSEVWIDLK 664
BLAST of EWM21456.1 vs. NCBI_GenBank
Match: gi|298715850|emb|CBJ28315.1| (SOUL heme-binding protein-like [Ectocarpus siliculosus]) HSP 1 Score: 180.644 bits (457), Expect = 6.267e-52 Identity = 87/167 (52.10%), Postives = 117/167 (70.06%), Query Frame = 0 Query: 1 MERDMYRPDVEFVDPLTRLRGVDSYQRNVDMLGSRTLLGGILFSDAGIVLHNIEDLGPRKLLTRWTLRLRAKVLPWGPMARFTGVSLYDLDEQARVVRQTDYWDSINLVEGEYRPAPLLTGLKDFLKQLAPG-AGGAQQAMNAELPFELLRRAPEYEVRRYPAFEAV 166 E + Y PDV+F+DP+T G D+Y++N+DMLG R+ LG ILF DAGI+LH+IE+ GP +L TRWTL + K LPW P+ RFTG+S Y +D++ARV++Q DYWDSINLV+G+Y+ L G++DF+ Q+ P AG A + LLRRA +YEVRR E V Sbjct: 28 FESERYLPDVQFIDPVTSFTGFDNYKKNLDMLGGRSALGNILFKDAGIILHDIEEPGPFRLRTRWTLTVCFKALPWQPVPRFTGISEYTIDDEARVIKQVDYWDSINLVKGQYQAVSALDGVRDFVGQVLPSPAGAATGGL-------LLRRAKDYEVRREEGGEVV 187
BLAST of EWM21456.1 vs. NCBI_GenBank
Match: gi|873220538|emb|CEM35275.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 168.318 bits (425), Expect = 5.048e-45 Identity = 88/176 (50.00%), Postives = 110/176 (62.50%), Query Frame = 0 Query: 1 MERDMYRPDVEFVDPLTRLRGVDSYQRNVDMLGSRTLLGGILFSDAGIVLHNIEDLGPRKLLTRWTLRLRAKVLPWGPMARFTGVSLYDLDEQARVVRQTDYWDSINLVEGEYRPAPLLTGLKDFLKQLAPGAGGAQQAMNAELPFELLRRAPEYEVRRYPAFEAVETNYNTRPEG 176 MER Y P VEF+DPL +GVD YQ NVD+LG R+LLG ++F DA I L+ DL + TRWTL L KVLPW P A FTG+S Y +D++ARVV+Q D+WDS+NL G Y P G+ D + QL P +A E P ELLRRA Y+VR+Y A + + T T EG Sbjct: 98 MERQFYTPQVEFIDPLNSFKGVDKYQGNVDLLGGRSLLGRVVFRDAYIHLYTFTDLDEYRFETRWTLGLTMKVLPWQPEAVFTGISRYTIDDEARVVQQKDFWDSVNLESGVYEEKPRTLGIADLIMQLRPQP-DPLKASAREAPSELLRRAKTYQVRKYGALKGLSTTALTGAEG 272 The following BLAST results are available for this feature:
BLAST of EWM21456.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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