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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF2358 |
| Orig transcript id | gnl|cribi|Naga_100019g46.478.mrna |
| Orig protein id | gnl|cribi|Naga_100019g46.478 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037252.1 | supercontig | KK037252.1:140052..142167 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9226 ID=rna9226|Name=rna9226|organism=Nannochloropsis gaditana|type=mRNA|length=1411bp
CCAAAAGCGAACTCAACAATTGTCTCGCTCCCTGCAGTGTGAATTGGAAA
ATATGAGTAAATCAGAAACATTTGCTACAACTCCGGGTGCAAGGAAGGCC
TACGGCTTTATCCATGGACGTGGCCTTGGTATCCTTGTGTCCCTCCTTCG
GGTCGCTGCACCCCGTGACTCACGCACTTAAGACCCTGCGTTCAAGCCAC
CGAACTCAATTAACCTGTGCGACCCCGCTTAACAGGTATACAGTCCTTCT
TTGCTTGAGTGTATTTCATTTTGATAATCCCATGGAAATAGTGATGGCAA
TCTGTGCTCTGGACGGCTCACAGGCCAAACGGGATGGATGCACTGATCGA
GGCCTTTGTTTGTGCCTCCCAGAAGGTTGGCCATGCACAATCACAACAAA
ATGTCCAATGTTGTCCACAAGCGTCAGCTTCCAGTCTTACAACTCCATCG
AGTTTTGGTGGGAGCTTCGTGAGAAATGATGCCATGGCGTATAACAGGAG
TCGTGCTACCAGTCCCGTTACGCTTTGCAAAGCTGCTGTTCTTATACCTC
TTTTCGAAAACCGAGAAGATGGCAAGATACATTGCTTGCTGACCGTTCGA
CCGTCGCACATGCGAGCTCATGCAGGAGAGGTGTGTTTCCCTGGCGGGAA
ACTAGACGATGGGGAGGATGTCGTGTCTGCAGCGCTGAGGGAAGCATGGG
AGGAGGTCGGACTTGCACCCAAGGTAGTGCGTGTGCTAGGAACAATGACC
CCGACCCTCTCACTTCATCTCTACGAAGTTACACCCGTGGTAGCTGTTAT
ACCTCCTGACTTCGTCGCACAGCCCAACCCTGAGGTGATGAAAGAGCGAG
AGAAATGGACTCGGATGACTACCATAGTGACAAATTACTTGTTCCCCTTT
GTATTATTACACCTCTTGGTGTCAATCACAGGAGGTTGCCGAGGTATTTT
CTTGTCCGCTCAGCCTCATCATGTCCCCATCACCTGGCCAACACACATGT
CAAGATTTGCACTGGTTTAGCGCCTGGCGGATGCACAAATTTCGGCATGC
AGATAAATGGGATGTGTGGGGTTTGACAGCTGAGACCCTGCTTCGACTTG
TCATCTTTTGCTTTCCTGAGCACCCTTTCCCATATGAAACATGTCATCCC
GACGGAACACACATGGAAACATGGTATCGAAGGGTGCTGGCACTCCCAGA
ATTTCATGAGCAAGCACAGGCAGCTGAAAGTAAACGCGCAAGAAAAGCAG
GCAGCCGCGCTAATAGACAAAGCCGCAGGTCGCTCACAGGTGAAAAGAAG
TCTTAGCTGTGGAGTTGGGGAATGTTCTGTCTTCGAAGAAATTTTATATA
CATCGTCAGGAAAATGTACAAAGTAAGGGGAAAAAGAAAATAATAGAGCA
TGCCCCGCAAA back to topprotein sequence of rna9226 >rna9226-protein ID=rna9226-protein|Name=rna9226|organism=Nannochloropsis gaditana|type=polypeptide|length=323bp
MERDMYRPDVEFVDPLTRLRGVDSYQRNVDMLGSRTLLGGILFSDAGIVL
HNIEDLGPRKLLTRWTLRLRAKVLPWGPMARFTGVSLYDLDEQARVVRQT
DYWDSINLVEGEYRPAPLLTGLKDFLKQLAPGAGGAQQAMNAELPFELLR
RAPEYEVRRYPAFEAVETNYNTRPEGYDRLGTYASGWNVENRKFKPFSPS
IMRIDKNEKDKTMMWPVGFSNEDLDQVGGVVSSQAIPAPADEIIRRTSVP
VQVVAVLRFEVPATAPVVKYYASRLVELLAADELVPTPAAAQTYTLCQYD
AIFSVGTRRNEVWAVLEKHDWQI back to topmRNA from alignment at KK037252.1:140052..142167+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9226 ID=rna9226|Name=rna9226|organism=Nannochloropsis gaditana|type=mRNA|length=2116bp|location=Sequence derived from alignment at KK037252.1:140052..142167+ (Nannochloropsis gaditana)
CGACGGTCGAACGGTCAGCAAGCAATGTATCTTGCCATCTTCTCGGTTTT
CGAAAAGAGGTATAAGAACAGCAGCTTTGCAAAGCGTAACGGGACTGGTA
GCACGACTCCTGTTATACGCCATGGCATCATTTCTCACGAAGCTCCCACC
AAAACTCGATGGAGTTGTAAGACTGGAAGCTGACGCTTGTGGACAACATT
GGACATTTTGTTGTGATTGTGCATGGCCAACCTTCTGGGAGGCACAAACA
AAGGCCTCGATCAGTGCATCCATCCCGTTTGGCCTGTGAGCTACTTCGTA
TCGTgtagggagagagcgaggaaacATGACCGTAGTGAAAGGGCTAGCAA
GCATATGGGAGGCTGTATCAACCCAAACCTCACCCGTCCAGAGCACAGAT
TGCCATCACTATTTCCATGGGATTATCAAAATGAAATACACTCAAGCAAA
GAAGGACTGTATACCTGTTAAGCGGGGTCGCACAGGTTAATTGAGTTCGG
TGGCTTGAACGCAGGGTCTTAAGTGCGTGAGTCACGGGGTGCAGCGaccc
gaaggagggacacAAGGATACCAAGGCCACGTCCATGGATAAAGCCGTAG
GCCTTCCTTGCACCCGGAGTTGTAGCAAATGTTTCTGATTTACTCATATT
TTCCAATTCACACTGCAGGGAGCGAGACAATTGTTGAGTTCGCTTTTGGG
CTGACGAGGAGTTAAGGGGTCGGGGAAGCATTAGCCATGCCCGGACAGCA
TGGAAGCTCCGCCACACTTGCGCGCTTTGTCATCCTGTTGATTTTCCCAT
ATGAAATTCAGGGATTCATTACGGCACCTATGGATGGCCAAGGGTTTTAT
GCCCATCGTCAGGACCCTTATTCctatttcctccccccctcctcctgttc
cccttcctcccgccatcCCCTCATCACTTTCCtgtcatcttcttcttcct
cgtcctctgcgtcttcttcaccttcttcatcttttcccaCTGCATCTTCG
TCATCTCCTACTTCTGGAGACGAAGCGTTccaaaaaaaaaagaaaacctA
AAAAAGACACTTCGGAGAGAAtacgcctctttcttcgcacCCATGGAGAG
AGACATGTACCGGCCAGATGTCGAGTTCGTTGATCCTCTCACAAGATTAC
GGGGCGTTGATTCATATCAACGAAATGTGGACATGCTGGGCTCACGCACC
CTCTTGGGTGGAATCCTCTTCAGCGACGCTGGTATCGTGCTGCATAATAT
CGAGGATCTGGGACCTCGTAAATTATTAACGCGCTGGACCTTGCGTTTGC
GTGCTAAGGTCCTACCTTGGGGGCCAATGGCGCGCTTTACAGGTGTCTCT
TTGTATGACCTAGACGAGCAGGCGCGCGTGGTGAGGCAGACGGACTACTG
GGACAGCATCAACCTTGTGGAAGGGGAGTATCGGCCAGCGCCTCTGCTGA
CAGGCCTCAAGGACTTCTTAAAGCAGCTGGCACCGGGTGCGGGGGGAGCT
CAACAGGCTATGAATGCGGAACTTCCTTTCGAGCTACTGCGTCGGGCACC
TGAGTACGAGGTAAGGAGATACCCGGCCTTCGAGGCAGTCGAGACAAACT
ACAACACACGCCCTGAAGGCTATGACCGCCTAGGTACATACGCGTCGGGA
TGGAATGTCGAAAATCGTAAATTCAAGCCTTTTAGTCCGTCTATCATGCG
CATCGACAAGAACGAGAAAGATAAGACCATGATGTGGCCCGTGGGGTTTA
GCAACGAAGACCTGGATCAGGTGGGGGGCGTGGTGTCGTCACAGGCCATA
CCCGCTCCTGCCGATGAAATCATCCGCCGTACCAGCGTACCTGTTCAGGT
TGTTGCTGTGCTGCGGTTTGAGGTGCCGGCCACAGCGCCCGTAGTGAAGT
ATTATGCGAGCAGGCTGGTCGAGCTTCTTGCTGCCGACGAGTTAGTTCCC
ACCCCAGCAGCAGCGCAAACCTACACTCTCTGTCAGTATGATGCCATATT
TTCCGTTGGCACTCGCCGAAATGAGGTATGGGCCGTGCTGGAGAAGCATG
ACTGGCAAATTTGATGTCTGTgagtgaaagaaagaaaagaataTCTGTAC
GATCCTGTACTACTTT back to topCoding sequence (CDS) from alignment at KK037252.1:140052..142167+ >rna9226 ID=rna9226|Name=rna9226|organism=Nannochloropsis gaditana|type=CDS|length=972bp|location=Sequence derived from alignment at KK037252.1:140052..142167+ (Nannochloropsis gaditana)
ATGGAGAGAGACATGTACCGGCCAGATGTCGAGTTCGTTGATCCTCTCAC
AAGATTACGGGGCGTTGATTCATATCAACGAAATGTGGACATGCTGGGCT
CACGCACCCTCTTGGGTGGAATCCTCTTCAGCGACGCTGGTATCGTGCTG
CATAATATCGAGGATCTGGGACCTCGTAAATTATTAACGCGCTGGACCTT
GCGTTTGCGTGCTAAGGTCCTACCTTGGGGGCCAATGGCGCGCTTTACAG
GTGTCTCTTTGTATGACCTAGACGAGCAGGCGCGCGTGGTGAGGCAGACG
GACTACTGGGACAGCATCAACCTTGTGGAAGGGGAGTATCGGCCAGCGCC
TCTGCTGACAGGCCTCAAGGACTTCTTAAAGCAGCTGGCACCGGGTGCGG
GGGGAGCTCAACAGGCTATGAATGCGGAACTTCCTTTCGAGCTACTGCGT
CGGGCACCTGAGTACGAGGTAAGGAGATACCCGGCCTTCGAGGCAGTCGA
GACAAACTACAACACACGCCCTGAAGGCTATGACCGCCTAGGTACATACG
CGTCGGGATGGAATGTCGAAAATCGTAAATTCAAGCCTTTTAGTCCGTCT
ATCATGCGCATCGACAAGAACGAGAAAGATAAGACCATGATGTGGCCCGT
GGGGTTTAGCAACGAAGACCTGGATCAGGTGGGGGGCGTGGTGTCGTCAC
AGGCCATACCCGCTCCTGCCGATGAAATCATCCGCCGTACCAGCGTACCT
GTTCAGGTTGTTGCTGTGCTGCGGTTTGAGGTGCCGGCCACAGCGCCCGT
AGTGAAGTATTATGCGAGCAGGCTGGTCGAGCTTCTTGCTGCCGACGAGT
TAGTTCCCACCCCAGCAGCAGCGCAAACCTACACTCTCTGTCAGTATGAT
GCCATATTTTCCGTTGGCACTCGCCGAAATGAGGTATGGGCCGTGCTGGA
GAAGCATGACTGGCAAATTTGA back to top
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