EWM21561.1, cds9113 (CDS) Nannochloropsis gaditana

Overview
NameEWM21561.1
Unique Namecds9113
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:432029..433225 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21561.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100559g2.1316.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:432029..433225 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
Homology
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|585101815|gb|EWM21561.1| (hypothetical protein Naga_100559g2 [Nannochloropsis gaditana])

HSP 1 Score: 809.29 bits (2089), Expect = 0.000e+0
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0
Query:    1 MRPRGTRACIALLQDSDVSLYQNATCPRFPTCTLLSSPILDSTLLAHVLSVSIKSLAAKMSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVGECLKKEGTGPGDVEREVRYEETPLPTTEAYRGLWTFLRAGGFDVADGPGSESGRLLGGKAMTGFRDYIEGLVEGMGEAETRGLPLN 398
            MRPRGTRACIALLQDSDVSLYQNATCPRFPTCTLLSSPILDSTLLAHVLSVSIKSLAAKMSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVGECLKKEGTGPGDVEREVRYEETPLPTTEAYRGLWTFLRAGGFDVADGPGSESGRLLGGKAMTGFRDYIEGLVEGMGEAETRGLPLN
Sbjct:    1 MRPRGTRACIALLQDSDVSLYQNATCPRFPTCTLLSSPILDSTLLAHVLSVSIKSLAAKMSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVGECLKKEGTGPGDVEREVRYEETPLPTTEAYRGLWTFLRAGGFDVADGPGSESGRLLGGKAMTGFRDYIEGLVEGMGEAETRGLPLN 398          
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|553178760|ref|XP_005852600.1| (hypothetical protein NGA_0711900 [Nannochloropsis gaditana CCMP526] >gi|422295932|gb|EKU23231.1| hypothetical protein NGA_0711900 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 689.108 bits (1777), Expect = 0.000e+0
Identity = 338/339 (99.71%), Postives = 339/339 (100.00%), Query Frame = 0
Query:   60 MSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVGECLKKEGTGPGDVEREVRYEETPLPTTEAYRGLWTFLRAGGFDVADGPGSESGRLLGGKAMTGFRDYIEGLVEGMGEAETRGLPLN 398
            MSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQAS+PVFRKVDVVGPEGNTLSAPEVCRVVGECLKKEGTGPGDVEREVRYEETPLPTTEAYRGLWTFLRAGGFDVADGPGSESGRLLGGKAMTGFRDYIEGLVEGMGEAETRGLPLN
Sbjct:    1 MSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASLPVFRKVDVVGPEGNTLSAPEVCRVVGECLKKEGTGPGDVEREVRYEETPLPTTEAYRGLWTFLRAGGFDVADGPGSESGRLLGGKAMTGFRDYIEGLVEGMGEAETRGLPLN 339          
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|551634187|ref|XP_005819940.1| (hypothetical protein GUITHDRAFT_148272 [Guillardia theta CCMP2712] >gi|428163912|gb|EKX32960.1| hypothetical protein GUITHDRAFT_148272 [Guillardia theta CCMP2712])

HSP 1 Score: 82.0333 bits (201), Expect = 2.540e-14
Identity = 61/175 (34.86%), Postives = 89/175 (50.86%), Query Frame = 0
Query:  119 AKVDMMTSDVDSLAA-ILSGHEVVVLVMAQGLSPEEMVGCQKEVAE---ALSRGMDKHEKQPSGN----------PPLLVKLSSYGIDG---PL--SQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEH 274
            +++ ++T DV+S  A  L G   V L  A   +P  +V   ++V     AL + +   +    GN            L+V++SS GID    P    QGPLG++H   E+  +S  L   S+RPTSFF+NF  YD P +    R   SPLG  A+VNW++  DIG V+A  +  H
Sbjct:   27 SEIRVITRDVNSSKARALGGLPGVKLFEADSCNPSSLVEAFRDVQRVFVALPQALPAEQMVSVGNGIADVAKACGVKLIVRISSLGIDSMSTPFLEDQGPLGNSHVACEEHIKSIGLIVTSIRPTSFFTNFN-YDLPGILQHSR-FSSPLGKSAKVNWISLTDIGNVSARALTHH 199          
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|1213244786|ref|WP_088644536.1| (NmrA family protein [Micromonospora wenchangensis] >gi|1212413544|gb|OWV06769.1| NmrA family protein [Micromonospora wenchangensis])

HSP 1 Score: 69.707 bits (169), Expect = 1.104e-9
Identity = 77/258 (29.84%), Postives = 112/258 (43.41%), Query Frame = 0
Query:   55 SLAAKMSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVG 312
            S  A  ++ + GATG  G  +V ALLD       Q+ A  R P S  A AL     +    L   + D    D  SLAA L+  E    +  +  S EE V  +  + +AL       +       P +V  S +G D   S  P  D+  R E+  R+  L    +RPT+F  NF +   PSL  G  V+R PL     +  ++ +DIGRVAAA++ +  +  G            V++VG E   L+ P +    G
Sbjct:    2 SAQATGTIAVFGATGQQGGAVVDALLDHRA----QVRALVRNPQSDRAQALA----ARGVELAATRAD----DPASLAAALATVEGFYFMTPEANSLEE-VEAEVRIGKALV------DAAVEAGVPHVVFNSVFGADRE-SGVPHHDSKHRIEEHLRTSGLRASMVRPTAFMENFASVMAPSLEHGEIVLRMPLSEDVALKMISIRDIGRVAAALLLDTAQAPGGA----------VELVGDE---LTGPRIAAAFG 226          
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|737881036|ref|WP_035847544.1| (NmrA/HSCARG family protein [Cryptosporangium arvum])

HSP 1 Score: 67.3958 bits (163), Expect = 5.502e-9
Identity = 64/212 (30.19%), Postives = 97/212 (45.75%), Query Frame = 0
Query:   60 MSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVI 271
            +++ + GATGN G  +V ALLD       ++ A  R P S  A AL     +    L + + D    D  SLAA L+  E    +  +  S EE +  +  +  AL       +     + P +V  S +G D   +  P  D+    E+  R   L    +RPT+F  NF +   PSL  G  V+R PL     +  ++ +DIGRVAAA++
Sbjct:    7 VTIAVFGATGNQGGAVVDALLDHEA----RVRALVRDPQSDRAQALA----ARGVELAVVRAD----DPASLAAALTAVEGFYFMTPEANSLEE-IEVEIRIGTALV------DAAADASVPHVVFNSVFGADRE-TGVPHHDSKHWVEEYLRKSGLRATMVRPTAFMENFTSVMAPSLEHGEIVLRLPLPEDVALKMISIRDIGRVAAALL 198          
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|589394345|gb|EXG79102.1| (putative nucleoside-diphosphate sugar epimerase [Cryptosporangium arvum DSM 44712])

HSP 1 Score: 67.3958 bits (163), Expect = 5.659e-9
Identity = 64/212 (30.19%), Postives = 97/212 (45.75%), Query Frame = 0
Query:   60 MSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVI 271
            +++ + GATGN G  +V ALLD       ++ A  R P S  A AL     +    L + + D    D  SLAA L+  E    +  +  S EE +  +  +  AL       +     + P +V  S +G D   +  P  D+    E+  R   L    +RPT+F  NF +   PSL  G  V+R PL     +  ++ +DIGRVAAA++
Sbjct:    4 VTIAVFGATGNQGGAVVDALLDHEA----RVRALVRDPQSDRAQALA----ARGVELAVVRAD----DPASLAAALTAVEGFYFMTPEANSLEE-IEVEIRIGTALV------DAAADASVPHVVFNSVFGADRE-TGVPHHDSKHWVEEYLRKSGLRATMVRPTAFMENFTSVMAPSLEHGEIVLRLPLPEDVALKMISIRDIGRVAAALL 195          
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|1056206498|ref|WP_067693858.1| (NmrA/HSCARG family protein [Actinoplanes awajinensis] >gi|973266005|gb|KUL31701.1| NmrA family protein [Actinoplanes awajinensis subsp. mycoplanecinus])

HSP 1 Score: 66.6254 bits (161), Expect = 1.199e-8
Identity = 71/252 (28.17%), Postives = 107/252 (42.46%), Query Frame = 0
Query:   61 SVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVG 312
            ++ + GATG  G  +V ALLD       ++ A  R P SGPA AL     +    +   ++D    D  SL A L+  E         ++PE       EV   +  G    +   + + P +V  S +G D   +  P  D+  R E+  R   L    +RP +F   F +   PSL  G  V+R PL     +  ++ +DIGRVAAA++    E  G            V++VG E   L+ P +    G
Sbjct:    8 TIAVFGATGQQGGAVVDALLDHKA----RVRALVRNPQSGPAQALA----ARGVEVAAIRID----DPASLMAALATVEAFYF-----MTPE--ANTLDEVEAEVRVGTALVDAAVAAHVPHVVFNSVFGADRE-TGVPHHDSKHRIEEYLRKSGLRATMVRPAAFMEGFASVMAPSLEHGEIVLRLPLPADVALKMISIRDIGRVAAALLLGTAEAPGGA----------VELVGDE---LTGPRIAAAFG 226          
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|1089552004|emb|SED64357.1| (Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains [Streptomyces sp. Ag109_O5-10])

HSP 1 Score: 65.0846 bits (157), Expect = 3.628e-8
Identity = 75/252 (29.76%), Postives = 110/252 (43.65%), Query Frame = 0
Query:   61 SVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVG 312
            ++ +LGATG  G  +V ALLD       ++ A  R P S  A AL          + LA +   T D  SLAA L+  E    +  +  S EE V  +  +  AL       +     + P +V  S +G D   S  P  D+    E+  R   L    +R T+F  NF +   PSL  G  V+R PL     +  ++ +DIGRVAAA++ +  +  G            VD+VG E   L+ P++    G
Sbjct:    8 TIAVLGATGRQGGAVVDALLDHKA----RVRALVRNPQSDRAQALAARG------VELAAI--RTDDPASLAAALATVEGFYFMTPEANSLEE-VEAEIRIGTALV------DAAVEADVPHVVFNSVFGADRE-SGVPHHDSKHWIEEHLRKSGLRAAMIRATAFMENFASVMAPSLEHGEIVLRLPLPEDVALKMISVRDIGRVAAALLLDTAQAPGGA----------VDLVGDE---LTGPQIAAAFG 226          
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|1197972799|ref|WP_086883711.1| (NmrA family protein [Streptomyces rhizosphaericus])

HSP 1 Score: 63.1586 bits (152), Expect = 1.445e-7
Identity = 74/252 (29.37%), Postives = 108/252 (42.86%), Query Frame = 0
Query:   61 SVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVG 312
            ++ + GATG  G  +V ALLD       ++ A  R P S  A AL     +    L   + D    D  SLAA L+  E    +  +  S EE V  +  +  AL       +       P +V  S +G D   S  P  D+    E+  R   L  V +R T+F  NF +   PSL  G  V+R PL     +  ++ +DIGRVAAA++ +  E  G            V++VG E   L+ P++    G
Sbjct:    8 TIAVFGATGQQGGAVVDALLDHKA----RVRALVRNPQSDRAQALA----ARGVELAAIRAD----DPASLAAALATVEGFYFMTPEANSLEE-VEAEIRIGTALV------DAAVEAGVPHVVFNSVFGADRE-SGVPHHDSKHWIEEHLRKSGLRAVMVRATAFMENFASVMAPSLEHGEIVLRLPLPEDVALKMISVRDIGRVAAALLLDTAEAPGGA----------VELVGDE---LTGPQIAAAFG 226          
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|703057386|ref|WP_033338755.1| (NmrA/HSCARG family protein [Catenuloplanes japonicus])

HSP 1 Score: 63.1586 bits (152), Expect = 1.704e-7
Identity = 73/251 (29.08%), Postives = 107/251 (42.63%), Query Frame = 0
Query:   62 VVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVG 312
            + + GATG  G  +V ALL+       ++ A  R P SG A AL     +    L   ++D    D  S AA L+  +    +  +  S +E V  +  V  AL       +       P +V  S +G D   S  P  D+  R E+  R   L    +RPT+F  NF     PSL  G  V+R PL     +  ++ +DIGRVAAA++    E  G            V++VG E   L+ P++    G
Sbjct:    5 IAVFGATGQQGGAVVDALLEHEA----RVRALVRDPQSGRAQALA----ARGVELTAVRID----DPASPAAALTAVDGFYFMTPEANSLDE-VEAEIRVGTALV------DAAADAGVPHVVFNSVFGADRE-SGVPHHDSKHRIEEHLRKSGLRATMVRPTAFMENFATVMAPSLEHGEIVLRLPLPEDVALKMISIRDIGRVAAALLLGTAEAPGGA----------VELVGDE---LTGPQIAAAFG 222          
The following BLAST results are available for this feature:
BLAST of EWM21561.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101815|gb|EWM21561.1|0.000e+0100.00hypothetical protein Naga_100559g2 [Nannochloropsi... [more]
gi|553178760|ref|XP_005852600.1|0.000e+099.71hypothetical protein NGA_0711900 [Nannochloropsis ... [more]
gi|551634187|ref|XP_005819940.1|2.540e-1434.86hypothetical protein GUITHDRAFT_148272 [Guillardia... [more]
gi|1213244786|ref|WP_088644536.1|1.104e-929.84NmrA family protein [Micromonospora wenchangensis]... [more]
gi|737881036|ref|WP_035847544.1|5.502e-930.19NmrA/HSCARG family protein [Cryptosporangium arvum... [more]
gi|589394345|gb|EXG79102.1|5.659e-930.19putative nucleoside-diphosphate sugar epimerase [C... [more]
gi|1056206498|ref|WP_067693858.1|1.199e-828.17NmrA/HSCARG family protein [Actinoplanes awajinens... [more]
gi|1089552004|emb|SED64357.1|3.628e-829.76Uncharacterized conserved protein YbjT, contains N... [more]
gi|1197972799|ref|WP_086883711.1|1.445e-729.37NmrA family protein [Streptomyces rhizosphaericus][more]
gi|703057386|ref|WP_033338755.1|1.704e-729.08NmrA/HSCARG family protein [Catenuloplanes japonic... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9143rna9143Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications