EWM21561.1, cds9113 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|585101815|gb|EWM21561.1| (hypothetical protein Naga_100559g2 [Nannochloropsis gaditana]) HSP 1 Score: 809.29 bits (2089), Expect = 0.000e+0 Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0 Query: 1 MRPRGTRACIALLQDSDVSLYQNATCPRFPTCTLLSSPILDSTLLAHVLSVSIKSLAAKMSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVGECLKKEGTGPGDVEREVRYEETPLPTTEAYRGLWTFLRAGGFDVADGPGSESGRLLGGKAMTGFRDYIEGLVEGMGEAETRGLPLN 398 MRPRGTRACIALLQDSDVSLYQNATCPRFPTCTLLSSPILDSTLLAHVLSVSIKSLAAKMSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVGECLKKEGTGPGDVEREVRYEETPLPTTEAYRGLWTFLRAGGFDVADGPGSESGRLLGGKAMTGFRDYIEGLVEGMGEAETRGLPLN Sbjct: 1 MRPRGTRACIALLQDSDVSLYQNATCPRFPTCTLLSSPILDSTLLAHVLSVSIKSLAAKMSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVGECLKKEGTGPGDVEREVRYEETPLPTTEAYRGLWTFLRAGGFDVADGPGSESGRLLGGKAMTGFRDYIEGLVEGMGEAETRGLPLN 398
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|553178760|ref|XP_005852600.1| (hypothetical protein NGA_0711900 [Nannochloropsis gaditana CCMP526] >gi|422295932|gb|EKU23231.1| hypothetical protein NGA_0711900 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 689.108 bits (1777), Expect = 0.000e+0 Identity = 338/339 (99.71%), Postives = 339/339 (100.00%), Query Frame = 0 Query: 60 MSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVGECLKKEGTGPGDVEREVRYEETPLPTTEAYRGLWTFLRAGGFDVADGPGSESGRLLGGKAMTGFRDYIEGLVEGMGEAETRGLPLN 398 MSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQAS+PVFRKVDVVGPEGNTLSAPEVCRVVGECLKKEGTGPGDVEREVRYEETPLPTTEAYRGLWTFLRAGGFDVADGPGSESGRLLGGKAMTGFRDYIEGLVEGMGEAETRGLPLN Sbjct: 1 MSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASLPVFRKVDVVGPEGNTLSAPEVCRVVGECLKKEGTGPGDVEREVRYEETPLPTTEAYRGLWTFLRAGGFDVADGPGSESGRLLGGKAMTGFRDYIEGLVEGMGEAETRGLPLN 339
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|551634187|ref|XP_005819940.1| (hypothetical protein GUITHDRAFT_148272 [Guillardia theta CCMP2712] >gi|428163912|gb|EKX32960.1| hypothetical protein GUITHDRAFT_148272 [Guillardia theta CCMP2712]) HSP 1 Score: 82.0333 bits (201), Expect = 2.540e-14 Identity = 61/175 (34.86%), Postives = 89/175 (50.86%), Query Frame = 0 Query: 119 AKVDMMTSDVDSLAA-ILSGHEVVVLVMAQGLSPEEMVGCQKEVAE---ALSRGMDKHEKQPSGN----------PPLLVKLSSYGIDG---PL--SQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEH 274 +++ ++T DV+S A L G V L A +P +V ++V AL + + + GN L+V++SS GID P QGPLG++H E+ +S L S+RPTSFF+NF YD P + R SPLG A+VNW++ DIG V+A + H Sbjct: 27 SEIRVITRDVNSSKARALGGLPGVKLFEADSCNPSSLVEAFRDVQRVFVALPQALPAEQMVSVGNGIADVAKACGVKLIVRISSLGIDSMSTPFLEDQGPLGNSHVACEEHIKSIGLIVTSIRPTSFFTNFN-YDLPGILQHSR-FSSPLGKSAKVNWISLTDIGNVSARALTHH 199
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|1213244786|ref|WP_088644536.1| (NmrA family protein [Micromonospora wenchangensis] >gi|1212413544|gb|OWV06769.1| NmrA family protein [Micromonospora wenchangensis]) HSP 1 Score: 69.707 bits (169), Expect = 1.104e-9 Identity = 77/258 (29.84%), Postives = 112/258 (43.41%), Query Frame = 0 Query: 55 SLAAKMSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVG 312 S A ++ + GATG G +V ALLD Q+ A R P S A AL + L + D D SLAA L+ E + + S EE V + + +AL + P +V S +G D S P D+ R E+ R+ L +RPT+F NF + PSL G V+R PL + ++ +DIGRVAAA++ + + G V++VG E L+ P + G Sbjct: 2 SAQATGTIAVFGATGQQGGAVVDALLDHRA----QVRALVRNPQSDRAQALA----ARGVELAATRAD----DPASLAAALATVEGFYFMTPEANSLEE-VEAEVRIGKALV------DAAVEAGVPHVVFNSVFGADRE-SGVPHHDSKHRIEEHLRTSGLRASMVRPTAFMENFASVMAPSLEHGEIVLRMPLSEDVALKMISIRDIGRVAAALLLDTAQAPGGA----------VELVGDE---LTGPRIAAAFG 226
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|737881036|ref|WP_035847544.1| (NmrA/HSCARG family protein [Cryptosporangium arvum]) HSP 1 Score: 67.3958 bits (163), Expect = 5.502e-9 Identity = 64/212 (30.19%), Postives = 97/212 (45.75%), Query Frame = 0 Query: 60 MSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVI 271 +++ + GATGN G +V ALLD ++ A R P S A AL + L + + D D SLAA L+ E + + S EE + + + AL + + P +V S +G D + P D+ E+ R L +RPT+F NF + PSL G V+R PL + ++ +DIGRVAAA++ Sbjct: 7 VTIAVFGATGNQGGAVVDALLDHEA----RVRALVRDPQSDRAQALA----ARGVELAVVRAD----DPASLAAALTAVEGFYFMTPEANSLEE-IEVEIRIGTALV------DAAADASVPHVVFNSVFGADRE-TGVPHHDSKHWVEEYLRKSGLRATMVRPTAFMENFTSVMAPSLEHGEIVLRLPLPEDVALKMISIRDIGRVAAALL 198
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|589394345|gb|EXG79102.1| (putative nucleoside-diphosphate sugar epimerase [Cryptosporangium arvum DSM 44712]) HSP 1 Score: 67.3958 bits (163), Expect = 5.659e-9 Identity = 64/212 (30.19%), Postives = 97/212 (45.75%), Query Frame = 0 Query: 60 MSVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVI 271 +++ + GATGN G +V ALLD ++ A R P S A AL + L + + D D SLAA L+ E + + S EE + + + AL + + P +V S +G D + P D+ E+ R L +RPT+F NF + PSL G V+R PL + ++ +DIGRVAAA++ Sbjct: 4 VTIAVFGATGNQGGAVVDALLDHEA----RVRALVRDPQSDRAQALA----ARGVELAVVRAD----DPASLAAALTAVEGFYFMTPEANSLEE-IEVEIRIGTALV------DAAADASVPHVVFNSVFGADRE-TGVPHHDSKHWVEEYLRKSGLRATMVRPTAFMENFTSVMAPSLEHGEIVLRLPLPEDVALKMISIRDIGRVAAALL 195
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|1056206498|ref|WP_067693858.1| (NmrA/HSCARG family protein [Actinoplanes awajinensis] >gi|973266005|gb|KUL31701.1| NmrA family protein [Actinoplanes awajinensis subsp. mycoplanecinus]) HSP 1 Score: 66.6254 bits (161), Expect = 1.199e-8 Identity = 71/252 (28.17%), Postives = 107/252 (42.46%), Query Frame = 0 Query: 61 SVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVG 312 ++ + GATG G +V ALLD ++ A R P SGPA AL + + ++D D SL A L+ E ++PE EV + G + + + P +V S +G D + P D+ R E+ R L +RP +F F + PSL G V+R PL + ++ +DIGRVAAA++ E G V++VG E L+ P + G Sbjct: 8 TIAVFGATGQQGGAVVDALLDHKA----RVRALVRNPQSGPAQALA----ARGVEVAAIRID----DPASLMAALATVEAFYF-----MTPE--ANTLDEVEAEVRVGTALVDAAVAAHVPHVVFNSVFGADRE-TGVPHHDSKHRIEEYLRKSGLRATMVRPAAFMEGFASVMAPSLEHGEIVLRLPLPADVALKMISIRDIGRVAAALLLGTAEAPGGA----------VELVGDE---LTGPRIAAAFG 226
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|1089552004|emb|SED64357.1| (Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains [Streptomyces sp. Ag109_O5-10]) HSP 1 Score: 65.0846 bits (157), Expect = 3.628e-8 Identity = 75/252 (29.76%), Postives = 110/252 (43.65%), Query Frame = 0 Query: 61 SVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVG 312 ++ +LGATG G +V ALLD ++ A R P S A AL + LA + T D SLAA L+ E + + S EE V + + AL + + P +V S +G D S P D+ E+ R L +R T+F NF + PSL G V+R PL + ++ +DIGRVAAA++ + + G VD+VG E L+ P++ G Sbjct: 8 TIAVLGATGRQGGAVVDALLDHKA----RVRALVRNPQSDRAQALAARG------VELAAI--RTDDPASLAAALATVEGFYFMTPEANSLEE-VEAEIRIGTALV------DAAVEADVPHVVFNSVFGADRE-SGVPHHDSKHWIEEHLRKSGLRAAMIRATAFMENFASVMAPSLEHGEIVLRLPLPEDVALKMISVRDIGRVAAALLLDTAQAPGGA----------VDLVGDE---LTGPQIAAAFG 226
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|1197972799|ref|WP_086883711.1| (NmrA family protein [Streptomyces rhizosphaericus]) HSP 1 Score: 63.1586 bits (152), Expect = 1.445e-7 Identity = 74/252 (29.37%), Postives = 108/252 (42.86%), Query Frame = 0 Query: 61 SVVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVG 312 ++ + GATG G +V ALLD ++ A R P S A AL + L + D D SLAA L+ E + + S EE V + + AL + P +V S +G D S P D+ E+ R L V +R T+F NF + PSL G V+R PL + ++ +DIGRVAAA++ + E G V++VG E L+ P++ G Sbjct: 8 TIAVFGATGQQGGAVVDALLDHKA----RVRALVRNPQSDRAQALA----ARGVELAAIRAD----DPASLAAALATVEGFYFMTPEANSLEE-VEAEIRIGTALV------DAAVEAGVPHVVFNSVFGADRE-SGVPHHDSKHWIEEHLRKSGLRAVMVRATAFMENFASVMAPSLEHGEIVLRLPLPEDVALKMISVRDIGRVAAALLLDTAEAPGGA----------VELVGDE---LTGPQIAAAFG 226
BLAST of EWM21561.1 vs. NCBI_GenBank
Match: gi|703057386|ref|WP_033338755.1| (NmrA/HSCARG family protein [Catenuloplanes japonicus]) HSP 1 Score: 63.1586 bits (152), Expect = 1.704e-7 Identity = 73/251 (29.08%), Postives = 107/251 (42.63%), Query Frame = 0 Query: 62 VVILGATGNVGRHIVQALLDLGGSLVTQIVACTRQPLSGPAMALKVAANSSRTRLCLAKVDMMTSDVDSLAAILSGHEVVVLVMAQGLSPEEMVGCQKEVAEALSRGMDKHEKQPSGNPPLLVKLSSYGIDGPLSQGPLGDAHRRGEDLFRSKNLPFVSLRPTSFFSNFEAYDWPSLRAGGRVIRSPLGPHARVNWVACQDIGRVAAAVIQEHLETLGNGRQASIPVFRKVDVVGPEGNTLSAPEVCRVVG 312 + + GATG G +V ALL+ ++ A R P SG A AL + L ++D D S AA L+ + + + S +E V + V AL + P +V S +G D S P D+ R E+ R L +RPT+F NF PSL G V+R PL + ++ +DIGRVAAA++ E G V++VG E L+ P++ G Sbjct: 5 IAVFGATGQQGGAVVDALLEHEA----RVRALVRDPQSGRAQALA----ARGVELTAVRID----DPASPAAALTAVDGFYFMTPEANSLDE-VEAEIRVGTALV------DAAADAGVPHVVFNSVFGADRE-SGVPHHDSKHRIEEHLRKSGLRATMVRPTAFMENFATVMAPSLEHGEIVLRLPLPEDVALKMISIRDIGRVAAALLLGTAEAPGGA----------VELVGDE---LTGPQIAAAFG 222 The following BLAST results are available for this feature:
BLAST of EWM21561.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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