rna9136, rna9136 (mRNA) Nannochloropsis gaditana

Overview
Namerna9136
Unique Namerna9136
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length621
Alignment locationKK037251.1:413675..414765 -

Link to JBrowse

Properties
Property NameValue
Product6-phosphogluconolactonase
Orig transcript idgnl|cribi|Naga_100012g89.1963.mrna
Orig protein idgnl|cribi|Naga_100012g89.1963
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:413675..414765 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100012g89gene8859Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21631.1cds9106Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9136rna9136-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9136 ID=rna9136|Name=rna9136|organism=Nannochloropsis gaditana|type=mRNA|length=621bp
ATGACAAGGGCACACCGGGGAGATCCAGAGGCCGAGAAAGCACGGGAATA
CGACGCAACGGAGGGCGAGGAAGACGAGCACGAAGGCCGGGCGTGGGTAG
TGGGGAGCGGGCACTACCAGCTGGTTGGGAAAGGGGCCCAAGCTGCCAAA
CGGGGATCAAGCCTTTCCAATGGAACCTCTGGCACTGCCAATGAACGGCG
CGGTGCTCATAAGGCCATGTCTTCGGATGGATACGCTGCTTCGGCAGCAT
CTTTTGCCGCATTACATGCTGCGGCCGGGGCCTTTGCGACAACTGAAGCA
GGCGCGGAGCCTGGGTTCTCAAGAGGGCAAAGGCCGGTATCCGCAATGAT
CCGCCTTAGTCTGGATCATCCCAGTCGCTCTCCGCTTCACTTGGTCACGC
CTTCGCCACAGATCGGAGGGAACAGAAGCCTGGCGAAGGCCGAAAGATAT
GCAGAAAAGGGAATGTTGGCAGACCTACTCAAAGGCCGGCCAAGGGAGAA
AATAAAGAAAGTGGGATTGACTCACTCTGTGAATACAAACACGACCACGA
CGATCATGTATGTATGGATTTTCACAATGCCAAGCTCCCGAAATATAGCT
CACATTGGGTACGAAGGATAA
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protein sequence of rna9136

>rna9136-protein ID=rna9136-protein|Name=rna9136|organism=Nannochloropsis gaditana|type=polypeptide|length=288bp
MEIDGAVRLVVGATPDALKACIATHIATAARSAIAHRGRYILALSGGSMP
HTLTGLITVPGVDWARVFILFTDERCVPLDHEDSNYNACNSAFLNKLPIP
VGNILTIDNSQGTAEAIAQDYEKRLMALLAVHGALSIDTVLLGIGPDGHT
ASLFPGHALLCETKKMVAGITDSPKPPPERITLTYPALRAAQEVVFIAVG
VAKASLFKEALCFSTSSMDGPREKAEYAEAADCSLMTATIRENLPFPAFQ
VRPASGELWYYTDREGASFLPAHGLSQNQTEKMGTGFL
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mRNA from alignment at KK037251.1:413675..414765-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9136 ID=rna9136|Name=rna9136|organism=Nannochloropsis gaditana|type=mRNA|length=1091bp|location=Sequence derived from alignment at KK037251.1:413675..414765- (Nannochloropsis gaditana)
GATTTCACTGAAGAATGGAAATCGACGGCGCTGTCAGGCTGGTCGTGGGG
GCCACACCAGATGCTCTGAAGGCATGTATTGCTACGCACATCGCGACAGC
CGCCCGGTCAGCAATTGCTCATCGCGGCCGCTACATTCTGGCTCTTTCTG
GAGGCTCCATGCCACATACATTAACTGGGCTGATCACCGTTCCGGGTGTT
GATTGGGCTCGCGTCTTCATTCTCTTCACAGATGAACGCTGCGTGCCCCT
GGACCATGAAGACAGCAATTATAATGCGTGCAACAGTGCCTTTCTCAACA
AGTTGCCAATTCCTGTGGGGAATATCTTGACAATTGATAACTCACAGGGC
ACCGCGGAGGCCATCGCGCAGGATTACGAGAAGAGGCTGATGGCTCTGCT
TGCCGTGCATGGCGCTCTGTCGATAGACACTGTACTCCTCGGCATAGGCC
CGGACGGTCACACTGCCTCCTTATTTCCTGGTCACGCCTTACTCTGCGAG
ACGAAAAAGATGGTGGCAGGCATCACGGATTCTCCCAAACCACCGCCAGA
ACGCATCACACTGACCTACCCGGCTTTGCGAGCCGCTCAGGAGGTTGTCT
TCATAGCCGTCGGGGTGGCGAAGGCTTCTCTGTTTAAAGAGGCTCTGTGC
TTTTCGACCAGTAGTATGGATGGGCCTAGAGAAAAAGCGGAGTACGCAGA
GGCCGCCGATTGTAGTCTCATGACCGCCACGATCCGCGAAAATTTGCCCT
TTCCAGCCTTCCAGGTCCGACCTGCCTCGGGAGAGCTTTGGTACTACACG
GACAGAGAAGGCGCCTCCTTTCTGCCTGCGCACGGCTTGTCGCAGAACCA
GACAGAAAAAATGGGCACGGGATTTCTTTAGGAAGAAAAAAGAGAGACTA
GTGTAAAAAAGGCTTGGAGGGAGAATTTACGAGGAGTCACGTGTACTTCA
CATTAGGAGCGCCATGTCTCAGTGGAATGACTCTGTCTGTCTGCTTGTAG
ACGTAATTTCCCTCGACTTTCATTTTTCTTTAAAACGGACTTATCCTTCG
TACCCAATGTGAGCTATATTTCGGGAGCTTGGCATTGTGAA
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Coding sequence (CDS) from alignment at KK037251.1:413675..414765-

>rna9136 ID=rna9136|Name=rna9136|organism=Nannochloropsis gaditana|type=CDS|length=867bp|location=Sequence derived from alignment at KK037251.1:413675..414765- (Nannochloropsis gaditana)
ATGGAAATCGACGGCGCTGTCAGGCTGGTCGTGGGGGCCACACCAGATGC
TCTGAAGGCATGTATTGCTACGCACATCGCGACAGCCGCCCGGTCAGCAA
TTGCTCATCGCGGCCGCTACATTCTGGCTCTTTCTGGAGGCTCCATGCCA
CATACATTAACTGGGCTGATCACCGTTCCGGGTGTTGATTGGGCTCGCGT
CTTCATTCTCTTCACAGATGAACGCTGCGTGCCCCTGGACCATGAAGACA
GCAATTATAATGCGTGCAACAGTGCCTTTCTCAACAAGTTGCCAATTCCT
GTGGGGAATATCTTGACAATTGATAACTCACAGGGCACCGCGGAGGCCAT
CGCGCAGGATTACGAGAAGAGGCTGATGGCTCTGCTTGCCGTGCATGGCG
CTCTGTCGATAGACACTGTACTCCTCGGCATAGGCCCGGACGGTCACACT
GCCTCCTTATTTCCTGGTCACGCCTTACTCTGCGAGACGAAAAAGATGGT
GGCAGGCATCACGGATTCTCCCAAACCACCGCCAGAACGCATCACACTGA
CCTACCCGGCTTTGCGAGCCGCTCAGGAGGTTGTCTTCATAGCCGTCGGG
GTGGCGAAGGCTTCTCTGTTTAAAGAGGCTCTGTGCTTTTCGACCAGTAG
TATGGATGGGCCTAGAGAAAAAGCGGAGTACGCAGAGGCCGCCGATTGTA
GTCTCATGACCGCCACGATCCGCGAAAATTTGCCCTTTCCAGCCTTCCAG
GTCCGACCTGCCTCGGGAGAGCTTTGGTACTACACGGACAGAGAAGGCGC
CTCCTTTCTGCCTGCGCACGGCTTGTCGCAGAACCAGACAGAAAAAATGG
GCACGGGATTTCTTTAG
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Synonyms
Publications