EWM21629.1, cds9104 (CDS) Nannochloropsis gaditana

Overview
NameEWM21629.1
Unique Namecds9104
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037251.1:407512..407755 +
Alignment locationKK037251.1:407873..407952 +
Alignment locationKK037251.1:408032..408228 +
Alignment locationKK037251.1:408327..408549 +
Alignment locationKK037251.1:408628..408870 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21629.1
ProductAcyl transferase/acyl hydrolase/lysophospholipase
Orig transcript idgnl|cribi|Naga_100012g87.1961.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037251.1supercontigKK037251.1:407512..407755 +
KK037251.1supercontigKK037251.1:407873..407952 +
KK037251.1supercontigKK037251.1:408032..408228 +
KK037251.1supercontigKK037251.1:408327..408549 +
KK037251.1supercontigKK037251.1:408628..408870 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0008152metabolic process
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR016035Acyl_Trfase/lysoPLipase
IPR002641Patatin/PLipase_A2-rel
Homology
BLAST of EWM21629.1 vs. NCBI_GenBank
Match: gi|585101884|gb|EWM21629.1| (Acyl transferase/acyl hydrolase/lysophospholipase [Nannochloropsis gaditana])

HSP 1 Score: 678.707 bits (1750), Expect = 0.000e+0
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0
Query:    1 MPQRVTRRTCQSFSSVAFLVRRASPSFLRANCCQPPRHACTAFLRTRHSTYGVRMRPIKWLSTRAKNCRIVNRKEYSFSFSGAGFLSPFHIGVVQALQEEGLLTKKSKLAGASGGALVAASTVCGISPSEQMLAYKEITRSCRTAGFLGRVRGTLLESLEAGLPPNAHDLANESLTVAVMRIWPTFQLQPELLHHFHSRQDLLDSLLASSHLPLYLDSAQPFWTRFRAGLYVDGGLIDLVPPVPDAIKVCVLPGHFLFRDDLHVTPHLLGSTYPFSLQQTMQWAFVAPPDDVADELLRMGHQAAIKWVQSGCIQESRGIDASAEEGNN 328
            MPQRVTRRTCQSFSSVAFLVRRASPSFLRANCCQPPRHACTAFLRTRHSTYGVRMRPIKWLSTRAKNCRIVNRKEYSFSFSGAGFLSPFHIGVVQALQEEGLLTKKSKLAGASGGALVAASTVCGISPSEQMLAYKEITRSCRTAGFLGRVRGTLLESLEAGLPPNAHDLANESLTVAVMRIWPTFQLQPELLHHFHSRQDLLDSLLASSHLPLYLDSAQPFWTRFRAGLYVDGGLIDLVPPVPDAIKVCVLPGHFLFRDDLHVTPHLLGSTYPFSLQQTMQWAFVAPPDDVADELLRMGHQAAIKWVQSGCIQESRGIDASAEEGNN
Sbjct:    1 MPQRVTRRTCQSFSSVAFLVRRASPSFLRANCCQPPRHACTAFLRTRHSTYGVRMRPIKWLSTRAKNCRIVNRKEYSFSFSGAGFLSPFHIGVVQALQEEGLLTKKSKLAGASGGALVAASTVCGISPSEQMLAYKEITRSCRTAGFLGRVRGTLLESLEAGLPPNAHDLANESLTVAVMRIWPTFQLQPELLHHFHSRQDLLDSLLASSHLPLYLDSAQPFWTRFRAGLYVDGGLIDLVPPVPDAIKVCVLPGHFLFRDDLHVTPHLLGSTYPFSLQQTMQWAFVAPPDDVADELLRMGHQAAIKWVQSGCIQESRGIDASAEEGNN 328          
BLAST of EWM21629.1 vs. NCBI_GenBank
Match: gi|635360001|emb|CCI50459.1| (unnamed protein product [Albugo candida] >gi|635360033|emb|CCI50450.1| unnamed protein product [Albugo candida])

HSP 1 Score: 157.147 bits (396), Expect = 2.230e-42
Identity = 91/276 (32.97%), Postives = 149/276 (53.99%), Query Frame = 0
Query:   55 MRPIKWLSTRAKNCRIVNRKEYSFSFSGAGFLSPFHIGVVQALQEEGLLTKKSKLAGASGGALVAASTVCGISPSEQMLAYKEITRS----CRTAGFLGRVRGTLLESLEAGLPPNAH-DLANESLTVAVMRIWPTFQLQPELLHHFHSRQDLLDSLLASSHLPLYLDSAQPFWTRFRAGLYVDGGLIDLVPPVPDAIKVCVLPGHFLFRDDLHVTPHLLGSTYPFSLQQTMQWAFVAPPDDVADELLRMGHQAAIKWVQSGCIQESRGIDASAEE 325
            +R ++W+  R  +  + +  + +F+FSGAGFL  +H+GV   LQE GLLT KSK++GASGGA+    T   I+  + ++A +   ++    CR  G  GR+   L    +     +   D  +E LT+   +IWP ++L       F S  DL  +++AS H+P YL   + FWT FR   Y+DGGL ++VP +    KVCV   H L R D +++P  +   +PF++ +  ++A   P   V D++  +G ++A  W ++    E +GID   + 
Sbjct:   10 VRGVRWI--RKSSTDVSSNSDLNFAFSGAGFLISYHLGVAVYLQERGLLTSKSKVSGASGGAI----TALAIAADQDLVAVQNDVKTMAGLCRNEGTWGRLEPRLRHLFKERFYDSVDIDKLSERLTIVTQQIWPKWELL--YADKFDSVDDLYGAIVASCHVPFYL--TKQFWTPFRGHFYIDGGLYNIVPEMTGYTKVCVFHAHLLRRLDYNISPS-IDPDFPFTIWELARFALFPPEAFVLDQIFELGKKSAALWAEN----EGKGIDVVKDN 270          
BLAST of EWM21629.1 vs. NCBI_GenBank
Match: gi|325192982|emb|CCA27363.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 155.221 bits (391), Expect = 9.643e-42
Identity = 90/241 (37.34%), Postives = 137/241 (56.85%), Query Frame = 0
Query:   77 SFSFSGAGFLSPFHIGVVQALQEEGLLTKKSKLAGASGGALVAASTVCGISPSEQMLAYKEITRS----CRTAGFLGRVRGTLLESLEAGLPPNAH-DLANESLTVAVMRIWPTFQLQPELLH--HFHSRQDLLDSLLASSHLPLYLDSAQPFWTRFRAGLYVDGGLIDLVPPVPDAIKVCVLPGHFLFRDDLHVTPHLLGSTYPFSLQQTMQWAFVAPPDDVADELLRMGHQAAIKWVQS 310
            +FSFSGAGFL  +H+GV   LQE+ LLT KSK+AGASGGA+    T   I+  + ++A +   ++    CR+ G  GR+   L    +     +   D  +E LT+   +IWP +    ELLH   F S  DL  +++AS H+P YL   + FWT FR   Y+DGGL ++VP +P   KVCV   H L R D +++P  +   +PF++ +  ++A   P   V D++  +G ++A  WV++
Sbjct:   30 NFSFSGAGFLISYHLGVAVYLQEKNLLTSKSKVAGASGGAI----TALAIAADQDLVAVQNDVKAMAALCRSEGTWGRLEPRLRHLFKERFYSSVDIDQLSERLTIVTQQIWPKW----ELLHADKFDSVDDLYGAIVASCHVPFYL--TRQFWTPFRGHFYIDGGLYNIVPEMPGYTKVCVFHAHLLRRLDYNISPS-IDPEFPFTIWELARFALFPPEAFVLDQIFELGKKSATLWVEN 259          
BLAST of EWM21629.1 vs. NCBI_GenBank
Match: gi|514691241|ref|XP_004993194.1| (hypothetical protein PTSG_06303 [Salpingoeca rosetta] >gi|326428724|gb|EGD74294.1| hypothetical protein PTSG_06303 [Salpingoeca rosetta])

HSP 1 Score: 149.828 bits (377), Expect = 2.149e-38
Identity = 87/234 (37.18%), Postives = 130/234 (55.56%), Query Frame = 0
Query:   78 FSFSGAGFLSPFHIGVVQALQEEGLLTKKSKLAGASGGALVAASTVCGISPSEQMLAYKEITRSCRTAGFLGRVRGTLLESLEAGLPPNAHDLANESLTVAVMRIWPTFQLQPELLHHFHSRQDLLDSLLASSHLPLYLDSAQPFWTRFRAGLYVDGGLIDLVPPVPDAIKVCVLPGHFLFRDDLH--VTPHLLGSTYPFSLQQTMQWAFVAPPDDVADELLRMGHQAAIKWVQ 309
             SFSG G++  +HIGV  A  E G +   ++LAGASGGAL+AA   CG+ P   +  + E  + C   G   +++  L E L+  LP +AH+L +  ++VA+ RIWP  + +P L+ HF +R DL+ +L+AS  +P YLDSA    TRFR    +DGG++ LVP +  A+KV      FL     H  ++P L    +P++  QT    F    + V  ++   G  AA  W+Q
Sbjct:  145 ISFSGCGWMLAYHIGVAHAFVEAGRVQDHTRLAGASGGALIAALLGCGLDPVTTLDLFLEHAQFCNENGTWWKLKRYLTEMLDRTLPDDAHELCSGRVSVALTRIWPRPRWRPILVRHFPTRDDLISALVASCMVPGYLDSA--LVTRFRDMYVIDGGVLHLVPHIAGAVKVSPFSSFFLRSQSAHIDISPRLT-PDFPYTDNQTWSLCFYPAEEAVTRDIYEWGRTAADIWLQ 375          
BLAST of EWM21629.1 vs. NCBI_GenBank
Match: gi|159469774|ref|XP_001693038.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158277840|gb|EDP03607.1| predicted protein [Chlamydomonas reinhardtii])

HSP 1 Score: 148.288 bits (373), Expect = 2.188e-38
Identity = 76/239 (31.80%), Postives = 131/239 (54.81%), Query Frame = 0
Query:   73 RKEYSFSFSGAGFLSPFHIGVVQALQEEGLLTKKSKLAGASGGALVAASTVCGISPSEQMLAYKEITRSCRTAGFLGRVRGTLLESLEAGLPPNAHDLANESLTVAVMRIWPTFQLQPELLHHFHSRQDLLDSLLASSHLPLYLDSAQPFWTRFRAGLYVDGGLIDLVPPVPDAI--KVCVLPGHFL--FRDDLHVTPHLLGSTYPFSLQQTMQWAFVAPPDDVADELLRMGHQAAIKW 307
            R +Y F FS  G L P+ +G+ + LQ   +L  ++ +AGAS G+++A     G+S  E ++A+ ++ R CR  G   R++  L   LE  LP + H+  N    +AV R+WP F   P+ +  F SR D++D+LL SSH+P + D +   +T +R+G+Y DGG+ + +P  P  +  ++   P   L  F+  + ++P      +P+ +   + WAF   P+D+  +L+  G + A  W
Sbjct:   79 RTDYGFGFSAGGLLFPYFLGISEQLQSMNVLLPETPVAGASAGSIIAVCAKSGLSEEELLVAFLDLARDCRQGGTRTRLKSVLRRVLEKALPDDIHERCNGRAHLAVTRLWPEF--TPQTISSFRSRTDVIDTLLTSSHIPYWFDGS--LFTMYRSGVYFDGGITNFIPSTPTDVCYRISCFPSQQLKAFK-GISLSPDTF-EQWPYDMGTMLGWAFEPAPEDMLLKLVEKGKRDARSW 311          
BLAST of EWM21629.1 vs. NCBI_GenBank
Match: gi|695396732|ref|XP_009521554.1| (hypothetical protein PHYSODRAFT_312329 [Phytophthora sojae] >gi|348686451|gb|EGZ26266.1| hypothetical protein PHYSODRAFT_312329 [Phytophthora sojae])

HSP 1 Score: 144.436 bits (363), Expect = 1.298e-37
Identity = 82/232 (35.34%), Postives = 125/232 (53.88%), Query Frame = 0
Query:   76 YSFSFSGAGFLSPFHIGVVQALQEEGLLTKKSKLAGASGGALVAASTVCGISPSEQMLAYKEITRSCRTAGFLGRVRGTLLESLEAGLPPNAHDLANESLTVAVMRIWPTFQLQPELLHHFHSRQDLLDSLLASSHLPLYLDSAQPFWTRFRAGLYVDGGLIDLVPPVPDAIKVCVLPGHFLFRDDLHVTPHLLGSTYPFSLQQTMQWAFVAPPDDVADELLRMGHQAAIKW 307
            ++FSFSG GFL P+H+GVVQ LQ+ G +  +SK AGASGG++ A S    +S  +     K + R C + G + ++   L             +   + LT+A  ++WP  Q    L   FHS +DL D+++AS ++P YL  A    + FR   +VDGGL  LVP VP   KVC      L R+D  ++P  +   +PF++ Q  ++A   P  +V D+L  +G +A+  W
Sbjct:   26 HNFSFSGCGFLIPYHLGVVQGLQDAGYIRPESKFAGASGGSIAALSLAANVSMEDIHEETKAMARLCHSEGTVWKLEERLRTIFRVKFGDVPVETLAKRLTIATEKMWP--QRAMVLTDDFHSPEDLCDAVIASCYVPWYL--ANRGTSVFRGEYHVDGGLFTLVPEVPGYTKVCAFHAEILRRNDYEISPS-IDPEFPFNIMQLARFALFPPEVEVLDQLFELGKKASTIW 252          
BLAST of EWM21629.1 vs. NCBI_GenBank
Match: gi|971518804|dbj|GAQ79352.1| (hypothetical protein KFL_000290010 [Klebsormidium nitens])

HSP 1 Score: 151.369 bits (381), Expect = 3.095e-37
Identity = 91/247 (36.84%), Postives = 130/247 (52.63%), Query Frame = 0
Query:   78 FSFSGAGFLSPFHIGVVQALQEEGLLTKKSKLAGASGGALVAASTVCGISPSEQMLAYKEITRSCRTAGFLGRVRGTLLESLEAGLPPNAHDLANESLTVAVMRI--WPTFQLQPELLHHFHSRQDLLDSLLASSHLPLYLDSAQPFWTRFRAGLYVDGGLIDLVPPV--PDAIKVCVLPGHFLFRDDLHVTPHLLGSTYPFSLQQTMQWAFVAPPDDVADELLRMGHQAAIKWVQSGCIQESRGID 320
            FSFS AG L P+H+GV Q L E GLLT K+ LAG+S GA+V+A+   G+SP E +   K++ + CR  G  GR+   L   L   LP N H++ N  + VAV ++  WP    +  L+  F+S+QD++++L+ SS +P YL  A      FR    +DGG+   +PP    + I+VC  P        + ++P         SL+Q + WA   P D + DEL   GH  A  WV S       G D
Sbjct:  492 FSFSAAGLLFPYHLGVCQKLMEAGLLTDKTPLAGSSAGAIVSAALGAGVSPVEALQMTKDLAKDCRKNGTAGRLGAVLRGILHEVLPENCHEMCNGRVRVAVTQLFRWP----RGILVDEFYSKQDVIEALITSSFIPGYLAPAAA--NVFRDRYCIDGGMTLFMPPTAGEETIRVCAFPASAYGLQGVQISPD-CNPDGRVSLRQLLSWALEPPSDGILDELYLQGHADAAVWVNSRTSANKEGAD 731          
BLAST of EWM21629.1 vs. NCBI_GenBank
Match: gi|953495098|emb|CEG43005.1| (patatin-like phospholipase domain-containing protein 3-like [Plasmopara halstedii])

HSP 1 Score: 137.887 bits (346), Expect = 2.843e-35
Identity = 91/237 (38.40%), Postives = 133/237 (56.12%), Query Frame = 0
Query:   77 SFSFSGAGFLSPFHIGVVQALQEEGLLTKKSKLAGASGGALVAASTVCGISPSEQMLAYKEITRSCRTAGFLGRVRGTLLESLEAGLPPNAHDLANES----LTVAVMRIWPTFQLQPELLHHFHSRQDLLDSLLASSHLPLYLDSAQPFWTRFRAGLYVDGGLIDLVPPVPDAIKVCVLPGHFLFRDDLHVTPHLLGSTYPFSLQQTMQWAFVAPPDDVADELLRMGHQAAIKWVQ 309
            +FSFSG GFL  +H+GV + LQ+ G +   SK AGASGGA+ A S V   S S+     K I + CR+ G L     +L E L A       DL+ E+    LT+A  R+WP   L   L + F+S  DL D+L+AS ++P YL  A+   + FR   ++DGG++ LVP VP  +KVC    H L R D  ++P  +   +PF++ Q  ++A   P  +V D+L  +G ++A  WV+
Sbjct:   18 NFSFSGCGFLISYHLGVAKGLQDAGYIQTSSKFAGASGGAIAALSLVANASMSDIHEETKTIAKLCRSQGTL----WSLEERLRATFYAKFSDLSTETLAQRLTIATERVWPARALV--LTNRFYSTDDLCDALIASCYVPWYL--ARRGMSMFRGEYHIDGGILTLVPEVPGYVKVCAFHAHILRRYDYEISPS-IDKNFPFAIWQLARFALFPPQVEVLDQLFELGQKSAYIWVE 245          
BLAST of EWM21629.1 vs. NCBI_GenBank
Match: gi|813111535|ref|XP_012195211.1| (hypothetical protein SPRG_19012 [Saprolegnia parasitica CBS 223.65] >gi|641540378|gb|KDO34160.1| hypothetical protein SPRG_19012 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 136.732 bits (343), Expect = 3.557e-35
Identity = 90/229 (39.30%), Postives = 121/229 (52.84%), Query Frame = 0
Query:   79 SFSGAGFLSPFHIGVVQALQEEGLLTKKSKLAGASGGALVAASTVCGISPSEQMLAYKEITRSCRTAGFLGRVRGTLLESLEAGLPPNAHDLANESLTVAVMRIWPTFQLQPELLHHFHSRQDLLDSLLASSHLPLYLDSAQPFWTRFRAGLYVDGGLIDLVPPVPDAIKVCVLPGHFLFRDDLHVTPHLLGSTYPFSLQQTMQWAFVAPPDDVADELLRMGHQAAIKW 307
            SF G GFL  FH+GV + LQ+ G+L   S+ AGASGGAL+A +   GIS         +     R   FL  +   + E +++ LP     L +++L V   +IWP  ++Q   L  F SR+DL D+LLAS H+P YL+    F  R+R   YVDGG   LVP +PDAI V   P      D   ++P LL S +P+S  Q + WA   P   V  EL+  G  AA  W
Sbjct:    4 SFGGCGFLLAFHVGVAKQLQKRGVLNASSRFAGASGGALLATALAYGISLDTVFDKLVDAADQARRHQFLADI---VREQVDSVLPTTP--LPSKNLVVTTAQIWP--RVQECHLTRFTSREDLRDALLASCHIPFYLNG--DFACRYRGAYYVDGGAFSLVPNMPDAIGVSPFP-----MDTRGISPSLL-SAFPYSKLQLLHWALSPPSHAVLRELVEWGDLAAQSW 217          
BLAST of EWM21629.1 vs. NCBI_GenBank
Match: gi|159469951|ref|XP_001693123.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158277381|gb|EDP03149.1| predicted protein [Chlamydomonas reinhardtii])

HSP 1 Score: 141.739 bits (356), Expect = 7.622e-35
Identity = 83/250 (33.20%), Postives = 128/250 (51.20%), Query Frame = 0
Query:   78 FSFSGAGFLSPFHIGVVQALQEEGLLTK-KSKLAGASGGALVAASTVCGISPSEQMLAYKEITRSCRTAGFLGRVRGTLLESLEAGLPPNAHDLANESLTVAVMRIWPTFQLQPELLHHFHSRQDLLDSLLASSHLPLYLDSAQPFWTRFRAGLYVDGGLIDLV--PPVPDAIKVCVLPGHFLFRD---------------DLHVTPHLLGSTYPFSLQQTMQWAFVAPPDDVADELLRMGHQAAIKWVQ 309
            F FS  GFL P+H+GV+  L E  +L   K ++AGAS G+L  A+  CG+ P +   A  E   +CR  G   R+ G L + L A LP +AH+    +  VA+ R++P   ++ EL+  F S+ D +++LL S H+P Y + +  + T FR   Y+DGG+   +  PP P A+KVC  P + +                  D+ ++P      +PFS  Q + WA V   DD+   ++  G + A  W Q
Sbjct:  150 FGFSAGGFLYPYHLGVLWELHELDILKDYKVQMAGASAGSLAVATYNCGLEPEKATQALHEFAENCRANGTRYRLGGLLKDFLHAYLPDDAHERCRGNTHVALTRLFPV--VRSELISEFESKDDFVNALLTSCHIPFYFNGS--WMTEFRGRFYMDGGVAAFIPRPPTPHAVKVCCFPVNEVLATVQDRVAQYERVAALLDVAISPD-ASEPWPFSYPQMVSWALVPADDDMLRYMINKGRRDARAWAQ 394          
The following BLAST results are available for this feature:
BLAST of EWM21629.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101884|gb|EWM21629.1|0.000e+0100.00Acyl transferase/acyl hydrolase/lysophospholipase ... [more]
gi|635360001|emb|CCI50459.1|2.230e-4232.97unnamed protein product [Albugo candida] >gi|63536... [more]
gi|325192982|emb|CCA27363.1|9.643e-4237.34conserved hypothetical protein [Albugo laibachii N... [more]
gi|514691241|ref|XP_004993194.1|2.149e-3837.18hypothetical protein PTSG_06303 [Salpingoeca roset... [more]
gi|159469774|ref|XP_001693038.1|2.188e-3831.80predicted protein [Chlamydomonas reinhardtii] >gi|... [more]
gi|695396732|ref|XP_009521554.1|1.298e-3735.34hypothetical protein PHYSODRAFT_312329 [Phytophtho... [more]
gi|971518804|dbj|GAQ79352.1|3.095e-3736.84hypothetical protein KFL_000290010 [Klebsormidium ... [more]
gi|953495098|emb|CEG43005.1|2.843e-3538.40patatin-like phospholipase domain-containing prote... [more]
gi|813111535|ref|XP_012195211.1|3.557e-3539.30hypothetical protein SPRG_19012 [Saprolegnia paras... [more]
gi|159469951|ref|XP_001693123.1|7.622e-3533.20predicted protein [Chlamydomonas reinhardtii] >gi|... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9134rna9134Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications