EWM21636.1, cds9100 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|585101891|gb|EWM21636.1| (fibroblast growth factor intracellular binding protein [Nannochloropsis gaditana]) HSP 1 Score: 1374.38 bits (3556), Expect = 0.000e+0 Identity = 681/681 (100.00%), Postives = 681/681 (100.00%), Query Frame = 0 Query: 1 MCNSREHNLLFCLHASSPIRVPLNLISRTALHVMDEDGCFDVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRFVLSPPSYDHPQGQPHSHHHKASVAHPTSPKPSPVEPSSSLPPSPHLLPPSSSHGLEPTRALSFQDLEFMSLAILTFWVPDTSRTVMPDLGAKATEGQDSQRRSLPGACTPPLDLERRGSQTLLSLSQRLGRVGVAGRRRAGDILECGQAPVPRVGGARSVSEVAEVLSSIADVMVREDEEREHRGADEGLEECGKGKRETGTDCGSRDARDTPALPPRRTSWAASATCPPEGLHGRARGLLQCRLRCAYGMELEKELLVGLRELSRLFNDSTILDQYQAQVAIRLLQPVPEIGERALGRAIRRAGGQGDALEGGRARLRAVERRFRAILQPLSALGWGLSLHKELRDLFEDMLVKVTAPLRDLNLSRQDLCNLFSALISSFPCLPAFTGKSKGLPQRRIKQYAVSWARFLSGVLLCILHTYSTWHLPSSRS 681 MCNSREHNLLFCLHASSPIRVPLNLISRTALHVMDEDGCFDVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRFVLSPPSYDHPQGQPHSHHHKASVAHPTSPKPSPVEPSSSLPPSPHLLPPSSSHGLEPTRALSFQDLEFMSLAILTFWVPDTSRTVMPDLGAKATEGQDSQRRSLPGACTPPLDLERRGSQTLLSLSQRLGRVGVAGRRRAGDILECGQAPVPRVGGARSVSEVAEVLSSIADVMVREDEEREHRGADEGLEECGKGKRETGTDCGSRDARDTPALPPRRTSWAASATCPPEGLHGRARGLLQCRLRCAYGMELEKELLVGLRELSRLFNDSTILDQYQAQVAIRLLQPVPEIGERALGRAIRRAGGQGDALEGGRARLRAVERRFRAILQPLSALGWGLSLHKELRDLFEDMLVKVTAPLRDLNLSRQDLCNLFSALISSFPCLPAFTGKSKGLPQRRIKQYAVSWARFLSGVLLCILHTYSTWHLPSSRS Sbjct: 1 MCNSREHNLLFCLHASSPIRVPLNLISRTALHVMDEDGCFDVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRFVLSPPSYDHPQGQPHSHHHKASVAHPTSPKPSPVEPSSSLPPSPHLLPPSSSHGLEPTRALSFQDLEFMSLAILTFWVPDTSRTVMPDLGAKATEGQDSQRRSLPGACTPPLDLERRGSQTLLSLSQRLGRVGVAGRRRAGDILECGQAPVPRVGGARSVSEVAEVLSSIADVMVREDEEREHRGADEGLEECGKGKRETGTDCGSRDARDTPALPPRRTSWAASATCPPEGLHGRARGLLQCRLRCAYGMELEKELLVGLRELSRLFNDSTILDQYQAQVAIRLLQPVPEIGERALGRAIRRAGGQGDALEGGRARLRAVERRFRAILQPLSALGWGLSLHKELRDLFEDMLVKVTAPLRDLNLSRQDLCNLFSALISSFPCLPAFTGKSKGLPQRRIKQYAVSWARFLSGVLLCILHTYSTWHLPSSRS 681
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|698825337|ref|XP_009845697.1| (hypothetical protein H257_18356 [Aphanomyces astaci] >gi|574099210|gb|ETV64840.1| hypothetical protein H257_18356 [Aphanomyces astaci]) HSP 1 Score: 105.916 bits (263), Expect = 1.536e-20 Identity = 73/215 (33.95%), Postives = 107/215 (49.77%), Query Frame = 0 Query: 40 FDVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRFVLSP 254 FD + +P + + F LWL+G + SA R R H S T F+ + ++ L+ D +RL + LE +L P Q Q+P ++ M E YY LD +VVR LL +K L R KDL++V + +L++CRRQF+NLRRIYT LE++ FQ + ++ F IS LA +Y FL+ RF + P Sbjct: 17 FDTFLTDPVLLSEDVFALWLEGQNTSSALDIR-------FRSYAHPPPMSS------TLDFSDGTNEVDQLRDLIWRDTVDQYRLFEKLETYLMQPLLLRTQLLFQIPPWQQQDMTEKYYMLDGAVVRRLLGKK-LTSRAQKDLDEVSEHSLRTLKNCRRQFENLRRIYTFLEEKNNFQGPLTRLIMDQFLISEKLAAKYACVVFLIHGRFEVHP 217
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|1069345608|ref|XP_018112438.1| (PREDICTED: fibroblast growth factor (acidic) intracellular binding protein L homeolog isoform X1 [Xenopus laevis]) HSP 1 Score: 103.219 bits (256), Expect = 4.113e-20 Identity = 67/212 (31.60%), Postives = 105/212 (49.53%), Query Frame = 0 Query: 41 DVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVV--VEGSFHISTVLACQYTVCSFLLFHRF 250 DV V I+ + ++LWL G S A R L+ L ++ AG V ES+ + D +R ++E L +PP + Q Q+P ++ +++E YY+ D + VRE+L +K L K KDL+D+ TGV+L+SCRRQFDN +R++ +E+ R A+V ++ +F +S LA Y F RF Sbjct: 16 DVFVGNTTLIDEDVYQLWLDGYSVSDAVNNR-------------------LKSGILEQTGAGADVLESDTM--------DHYRTFQMIERLLHYPPKLVQQLLFQIPPYKQSMLIERYYAFDEAFVREVLGKK-LSKGTKKDLDDISSKTGVTLKSCRRQFDNFKRVFKVVEEMRG-----ALVENIQQNFLLSDKLARDYAAIVFFANSRF 194
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|148226692|ref|NP_001090040.1| (fibroblast growth factor (acidic) intracellular binding protein L homeolog [Xenopus laevis] >gi|1069345610|ref|XP_018112439.1| PREDICTED: fibroblast growth factor (acidic) intracellular binding protein L homeolog isoform X2 [Xenopus laevis] >gi|66912053|gb|AAH97711.1| MGC115383 protein [Xenopus laevis] >gi|1050381941|gb|OCT84136.1| hypothetical protein XELAEV_18022277mg [Xenopus laevis] >gi|1050381942|gb|OCT84137.1| hypothetical protein XELAEV_18022277mg [Xenopus laevis]) HSP 1 Score: 102.834 bits (255), Expect = 4.579e-20 Identity = 67/212 (31.60%), Postives = 105/212 (49.53%), Query Frame = 0 Query: 41 DVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVV--VEGSFHISTVLACQYTVCSFLLFHRF 250 DV V I+ + ++LWL G S A R L+ L ++ AG V ES+ + D +R ++E L +PP + Q Q+P ++ +++E YY+ D + VRE+L +K L K KDL+D+ TGV+L+SCRRQFDN +R++ +E+ R A+V ++ +F +S LA Y F RF Sbjct: 6 DVFVGNTTLIDEDVYQLWLDGYSVSDAVNNR-------------------LKSGILEQTGAGADVLESDTM--------DHYRTFQMIERLLHYPPKLVQQLLFQIPPYKQSMLIERYYAFDEAFVREVLGKK-LSKGTKKDLDDISSKTGVTLKSCRRQFDNFKRVFKVVEEMRG-----ALVENIQQNFLLSDKLARDYAAIVFFANSRF 184
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|301620004|ref|XP_002939371.1| (PREDICTED: acidic fibroblast growth factor intracellular-binding protein [Xenopus tropicalis] >gi|1043424596|gb|OCA37225.1| hypothetical protein XENTR_v90011017mg [Xenopus tropicalis]) HSP 1 Score: 102.449 bits (254), Expect = 7.094e-20 Identity = 68/212 (32.08%), Postives = 104/212 (49.06%), Query Frame = 0 Query: 41 DVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVV--VEGSFHISTVLACQYTVCSFLLFHRF 250 DV V I+ ++LWL G S A R L+ L ++ AG V ES+ + D +R ++E L +PP + Q Q+P ++ +++E YY+ D + VRE+L +K L K KDLED+ TGV+L+SCRRQFDN +R++ +E+ R A+V ++ +F +S LA Y F RF Sbjct: 6 DVFVGNTTLIDEEVYQLWLDGYSVSDAVNIR-------------------LKSGILDQTGAGADVLESDTM--------DHYRTFQMIERLLHYPPKLVQQLLFQIPPYKQSMLIERYYAFDEAFVREVLGKK-LSKGTKKDLEDISSKTGVTLKSCRRQFDNFKRVFKVVEEMRG-----ALVENIQQNFLLSDKLARDYAAIVFFANSRF 184
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|1173949005|gb|OQR97083.1| (hypothetical protein ACHHYP_20635 [Achlya hypogyna]) HSP 1 Score: 102.834 bits (255), Expect = 1.520e-19 Identity = 70/211 (33.18%), Postives = 105/211 (49.76%), Query Frame = 0 Query: 40 FDVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRF 250 FD + +P + + + LWL+G + SA RV +S +A ++ G+ + ++ L+ D +RL + LE + P Q Q+P ++ M E YYSLD VVR LL +K L + KDL++V + +L++CRRQF+NLRRIY LE +R FQ A + F IS LA +Y FL+ RF Sbjct: 6 FDTFLTDPVLLSEDVYVLWLEGQNAASALDVRV----------------RSYGPAATPRALPGMADEHDQLRDLIWRDTVDQYRLFEKLESYFMQPKLLRTQLLFQIPAWQQQEMTEKYYSLDGPVVRRLLGKK-LTSKAQKDLDEVSEQSFRTLKNCRRQFENLRRIYAMLE-ERNFQGCAARAICDHFLISERLAAKYACVVFLVHGRF 198
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|668458984|gb|KFB46824.1| (AGAP002269-PA-like protein [Anopheles sinensis]) HSP 1 Score: 100.908 bits (250), Expect = 2.326e-19 Identity = 73/218 (33.49%), Postives = 107/218 (49.08%), Query Frame = 0 Query: 34 MDEDGCFDVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEV-LRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRF 250 M D DVCV+ I+ ++LW++G S A AL K G+ +EV L L+ + + D +R +LE FL PP GQ Q+ Q+R L+++ YYSLD +V REL +K R KDL++V TGV L+SCRRQFDN++RI+ +E+ Q ++A + F + LA +Y F+ RF Sbjct: 1 MFTDVNVDVCVSNYTIIDPEIYQLWVEGYSSAEAV--------------------------ALLKQKGGIF---AEVPLELIASDVQDHYRTYAMLEKFLHAPPKLSGQLTFQICPQDRSLLIDSYYSLDDTVARELFGKK-FNSRNRKDLDEVAEKTGVRLKSCRRQFDNVKRIFKAVEET---QGNIANNIRQHFVLPEELAQKYAAVVFIACLRF 185
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|1072247275|ref|XP_018408370.1| (PREDICTED: acidic fibroblast growth factor intracellular-binding protein [Nanorana parkeri]) HSP 1 Score: 100.908 bits (250), Expect = 2.423e-19 Identity = 65/210 (30.95%), Postives = 103/210 (49.05%), Query Frame = 0 Query: 41 DVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRF 250 DV V I+ ++LWL G S A R L+ L ++ AG V ES+ + D +R ++E L +PP + Q Q+P ++ +++E YY+ D + VRE+L +K L K KDL+D+ TGV+L+SCRRQFDN +R++ +E+ R ++ ++ +F +S LA Y F RF Sbjct: 6 DVFVGNTTLIDEEVYQLWLDGYSVSDAVNIR-------------------LKSGILDQTGAGPDVLESDTM--------DHYRTFQMIERLLHYPPKLVQQLLFQIPPYKQSMLIERYYAFDEAFVREVLGKK-LSKGTKKDLDDISAKTGVTLKSCRRQFDNFKRVFKVVEEMRG---NLVENIQQNFLLSDKLARDYAAIVFFANSRF 184
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|1012243863|ref|XP_015974988.1| (PREDICTED: acidic fibroblast growth factor intracellular-binding protein isoform X3 [Rousettus aegyptiacus]) HSP 1 Score: 100.138 bits (248), Expect = 3.203e-19 Identity = 65/211 (30.81%), Postives = 100/211 (47.39%), Query Frame = 0 Query: 40 FDVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRF 250 D+ V I+ + ++LWL G S A RV R L ++ A V +S+ + D +R +LE L PP L Q Q+P + L++E YY+ D + VRE+L +K L K KDL+D+ TG++L+SCRRQFDN +R++ +E+ R + ++ F +S LA Y F +RF Sbjct: 5 LDIFVGNTTLIDEDVYRLWLDGYSVNDAVALRV-------------------RSGILEQTGATAAVLQSDTM--------DHYRTFHMLERLLHAPPKLLHQLIFQIPPSRQALLIERYYAFDEAFVREVLGKK-LSKGTKKDLDDISTKTGITLKSCRRQFDNFKRVFKVVEEMRG---SLVDNIQQHFLLSDRLARDYAAIVFFANNRF 184
BLAST of EWM21636.1 vs. NCBI_GenBank
Match: gi|987961486|ref|XP_015424544.1| (PREDICTED: acidic fibroblast growth factor intracellular-binding protein isoform X3 [Myotis davidii]) HSP 1 Score: 99.3673 bits (246), Expect = 3.350e-19 Identity = 65/210 (30.95%), Postives = 100/210 (47.62%), Query Frame = 0 Query: 41 DVCVAEPDPIEVNSFKLWLQGLSPESAARRRVNEIFSVLRQSVHDKDEQSLRMSALTKSFAGLCVDESEVLRLVRASLADDFRLLDLLEGFLFHPPSFLGQPFVQLPRQERMLMLEVYYSLDPSVVRELLWRKPLGKRIGKDLEDVEGATGVSLRSCRRQFDNLRRIYTHLEDQRAFQCHVAVVVEGSFHISTVLACQYTVCSFLLFHRF 250 D+ V I+ + ++LWL G S A RV R L ++ A V +S+ + D +R +LE L PP L Q Q+P + L++E YY+ D + VRE+L +K L K KDL+D+ TG++L+SCRRQFDN +R++ +E+ R + ++ F +S LA Y F +RF Sbjct: 6 DIFVGNTTLIDEDVYRLWLDGYSVNDAVALRV-------------------RSGILEQTGATAAVLQSDTM--------DHYRTFHMLERLLHAPPKLLHQLIFQIPPSRQALLIERYYAFDEAFVREVLGKK-LSKGTKKDLDDISTKTGITLKSCRRQFDNFKRVFKVVEEMRG---SLVDNIQQHFLLSDRLARDYAAIVFFANNRF 184 The following BLAST results are available for this feature:
BLAST of EWM21636.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|