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Properties
| Property Name | Value |
|---|
| Product | thioredoxin-like protein |
| Orig transcript id | gnl|cribi|Naga_100012g63.1897.mrna |
| Orig protein id | gnl|cribi|Naga_100012g63.1897 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037251.1 | supercontig | KK037251.1:362169..364651 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9113 ID=rna9113|Name=rna9113|organism=Nannochloropsis gaditana|type=mRNA|length=789bp
ATGGCTCCGAAGAAAGCAAACAAGCGTGCAGGGAAGCCCCGCACAACCTT
GCTGGCCCGTGGTGTCCCATCTCTGAGTCATGCCGCGACTGTGAAGAAGG
GGGGGCGGTATAGGTTCTTCGGCAAGGGCGGGAAGAAGGCTGCGGCGCCC
GCGCCTGCTGCGGGCAAGGCGCCTCGCTTCTACCCGGCTGACGACATCCC
TGTCCCTCGTCGCAGTGCGCGCCACATTCAGAAACCGACCAAGCTTAAGG
CAGGTATCAAGCCCGGTTCTGTGCTGATTATGCTCGCTGGCCGGTTCCGT
GGCAAGCGCGTGGTTTTCCTGAAGCAGCTGGCGTCGGGCACGCTCCTCGT
AACGGGCCCTTACTCATTGAATGGTGTCCCTCTCCGCCGAGTCAATCAAG
CCTATGTAATTGTCACCAGCCAAGTGGTGGATATCTCAGCCGTCAAGGTG
CCTGACACGTTGAATGATGCGTATTTCGCGGTCCCGGCGGATGTCAAAGG
CAAGGAGACGATCCTTGCCGCTGGTGCGGGGAAGAAGGCGACTGAGGTGT
CTGAGTCGCGCAAGAAGGACCAGAAGGCGGTGGACGAGCAGGTGCTGGTA
GCTGTCAAGAAGGTGGCGCAATTGGATGGGTACTTGAAGGCGCGATTTTC
CTTGAAAAAGGGCGTGAAGCCGCACGAGATCAAGATCCGTCTGTCGTCAT
TCTTAGCTCTCTCTCTCACTTTGAGGGATGATACTCATCAACATGGTGGG
AGGAATGCGGCGCCCACCACATCCACGATCGAACATTAG back to topprotein sequence of rna9113 >rna9113-protein ID=rna9113-protein|Name=rna9113|organism=Nannochloropsis gaditana|type=polypeptide|length=614bp
MPPGPRPHVNLPLSLTSLVITGMMWKPWERTRRDSCAMSVRRILGRDMRE
ITRIRKTRLHTSCTACLLPPLIFLLSLLLPTSYAYEQYLFSKASDSSRPE
LKSVEDLSRTAFESLKANGEPWAIMFYSPTCGHCQHFAPTWAAVWGALRG
KKELGGLQIGAVSCLAEAGACQDERVHAYPTLKAYGVRGSNGKGTAIPNN
NDEDLISWITSKFTEQVAGEDEGEVLMGNEAREPARSAPRETSVSQDQPG
PDSSRAAPAASNIAATPKKEGPQSPNTRTRSQAPGDLEAEDSLSIPALRR
ARVEDAFTSLRFALDHDLFLGSKVLRGQALSSLRDLLHVLSLLFPGGPRR
RLFRGLLEAVYPLKEIGIAEWEDLLARHLDPVLPSLHAASRAGGEGGEGG
ERASKRSYEWAVCGREAGYTCGLWTLFHLLSVKSAVRARDKAASSSTSVV
SPLNVLLVIEGFVSNFFGCQECRDHFLNAFEETRGRWADRGPKGAVWWVY
DLHDKVNVRLGKRRWPPVRKCPRCWGKEGASGEPEWEALYEEMVKGYDVH
DTETAGEDRAMGGQVRSIGELAALSRDYAFVSGIMLVLCFAFCVRLRKKL
RTGRRKKWDTMLPM back to topmRNA from alignment at KK037251.1:362169..364651+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9113 ID=rna9113|Name=rna9113|organism=Nannochloropsis gaditana|type=mRNA|length=2483bp|location=Sequence derived from alignment at KK037251.1:362169..364651+ (Nannochloropsis gaditana)
ACACCACGGGCCAGCAAGGTTGTGCGGGGCTTCCCTGCACGCTTGTTTGC
TTTCTTCGGAGCCATAGCGTCTGTCAAGGCACGTGGAGGATAGGGTTTGA
AGAGGGGTGGTTATGGGAGTCTGTTTCTTCATTCGCATGGCCTCTCCTTA
CAGAAGGCCCCTGATGGAAGAATCAGTTTGGAGAAGCGCTTACGACCTCC
ACAAGAATGTCAGTGAGAGTGGCGAAGGAAGTAGTGAACATTTTTCCGAG
GCACTGCGATTTGTGAGCGGTTCACGCAAactggagaagaagcagggagc
tTCTCTGCCATCATCTCAACCACCACACAATTCCCCGCCAGGTTACACGA
TCCGCTCCTCCGACCATACCACAGCTCAGCACCGAATCCAAGCTCTACAA
TGAAATGTTCTCACTCCTGGCACGTTTCTGGtcccctgtccccgcccacc
accgccacggaGTGGGCGGAGCGAGGCCACCACAGCCACAGAGCGGGGCT
GGCGAAGGGAACTAGAATGATCGATCAGGCGCTAGGCCCACATGCCGCCG
GGCCCGCGGCCCCATGTCAACTTGCCTCTTTCACTCACGTCCTTGGTAAT
TACAGGGATGATGTGGAAGCCATGGGAGCGAACCAGGCGTGACTCGTGCG
CTATGAGTGTGCGACGCATCCTGGGGCGTGATATGCGGGAAATCACGCGC
ATAAGAAAAACCCGGCTACACACCTCATGTACCGCCtgtctgcttcctcc
cctcatctTCTTGCTTTCTCTGCTGCTCCCTACTTCTTACGCCTACGAGC
AATATCTCTTCAGTAAAGCCTCTGATAGCTCGCGGCCGGAGCTTAAAAGT
GTGGAAGACCTCAGTCGTACGGCCTTCGAGTCGCTCAAGGCAAATGGGGA
GCCGTGGGCGATCATGTTTTACTCTCCTACATGCGGGCACTGCCAACATT
TTGCACCCACGTGGGCAGCCGTGTGGGGGGCGCtaagaggaaaaaaggag
ctgGGGGGGCTTCAAATTGGTGCTGTAAGTTGCCTGGCTGAGGCAGGGGC
ATGTCAGGATGAGAGGGTCCATGCGTACCCCACGCTCAAGGCCTACGGCG
TGCGAGGCAGTAACGGAAAAGGCACGGCCATTCCCAATAACAATGACGAG
GATCTGATCAGTTGGATCACATCCAAATTTACTGAGCAAGTTGctgggga
agacgagggagaagtTCTTATGGGCAATGAAGCACGAGAGCCGGCGAGGT
CGGCGCCCAGAGAAACTTCCGTCTCCCAGGATCAACCGGGGCCCGACTCG
TCACGAGCTGCGCCTGCCGCATCTAATATTGCCGCCACTccaaagaagga
aggaccaCAATCCCCGAACACACGTACCAGATCTCAAGCTCCGGGCGACT
TGGAGGCTGAGGATAGTCTGAGCATCCCTGCGCTTCGACGTGCGAGGGTG
GAGGAtgccttcacctccttgcGCTTCGCCTTGGACCACGACTTATTTCT
GGGCTCGAAAGTCCTCAGGGGTCAGGCCTTAAGTAGCCTGCGCGATTTGC
TGCACGTGCTGTCCCTGCTTTTCCCGGGAGGGCCACGACGCCGACTCTTC
CGAGGCTTACTGGAGGCCGTGTACCCCTTGAAGGAGATCGGCATCGCAGA
GTGGGAAGACTTACTTGCCCGGCACCTTGATCCAGTGCTCCCATCCCTGC
ACGCTgcgagcagggcgggaggagaaggtggtgaagggggggaaagggca
agcaAGCGGTCCTACGAGTGGGCGGTCTGTGGGCGGGAGGCTGGCTACAC
GTGCGGCCTCTGGACgctctttcacctcctctccgtgAAGAGCGCCGTCC
GCGCCCGCGACAaggccgcctcttcctccacgagtGTGGTCTCCCCTCTT
AACGTCCTGCTGGTGATCGAGGGCTTCGTCTCGAACTTCTTCGGCTGCCA
GGAGTGCAGGGACCACTTCCTGAATGCCTTCGAGGAAACGCGGGGCCGGT
GGGCGGACAGGGGGCCCAAGGGGGCGGTCTGGTGGGTCTACGACCTGCAC
GACAAAGTGAACGTGCGCCTGGGAAAGCGGCGGTGGCCGCCGGTGAGGAA
GTGTCCGAGGTGctggggcaaggagggggccagTGGGGAGCCGGAGTGGG
AGGCGCTCTACGAGGAAATGGTGAAGGGATACGACGTGCACGACACAgag
acggcgggggaagatAGGGCGATGGGGGGCCAGGTGCGGAGCATCGGGGA
GCTGGCGGCCTTGTCGCGGGACTACGCGTTCGTGAGCGGCATCATGCTCG
TCCTCTGCTTCGCCTTCTGCGTGCGGTTGCGCAAGAAACTCCGGACCGGT
CGGCGGAAAAAATGGGATACGATGCTGCCCATGTAGGATGGAAGCCGGAA
ACGATGACAAGGGCGGCGTTCGGGCTGGCAATGTAAAGGGTAAATTGGCT
GGGTCAGCACCCAAAAGAAAGCACAATTTTTTT back to topCoding sequence (CDS) from alignment at KK037251.1:362169..364651+ >rna9113 ID=rna9113|Name=rna9113|organism=Nannochloropsis gaditana|type=CDS|length=1845bp|location=Sequence derived from alignment at KK037251.1:362169..364651+ (Nannochloropsis gaditana)
ATGCCGCCGGGCCCGCGGCCCCATGTCAACTTGCCTCTTTCACTCACGTC
CTTGGTAATTACAGGGATGATGTGGAAGCCATGGGAGCGAACCAGGCGTG
ACTCGTGCGCTATGAGTGTGCGACGCATCCTGGGGCGTGATATGCGGGAA
ATCACGCGCATAAGAAAAACCCGGCTACACACCTCATGTACCGCCtgtct
gcttcctcccctcatctTCTTGCTTTCTCTGCTGCTCCCTACTTCTTACG
CCTACGAGCAATATCTCTTCAGTAAAGCCTCTGATAGCTCGCGGCCGGAG
CTTAAAAGTGTGGAAGACCTCAGTCGTACGGCCTTCGAGTCGCTCAAGGC
AAATGGGGAGCCGTGGGCGATCATGTTTTACTCTCCTACATGCGGGCACT
GCCAACATTTTGCACCCACGTGGGCAGCCGTGTGGGGGGCGCtaagagga
aaaaaggagctgGGGGGGCTTCAAATTGGTGCTGTAAGTTGCCTGGCTGA
GGCAGGGGCATGTCAGGATGAGAGGGTCCATGCGTACCCCACGCTCAAGG
CCTACGGCGTGCGAGGCAGTAACGGAAAAGGCACGGCCATTCCCAATAAC
AATGACGAGGATCTGATCAGTTGGATCACATCCAAATTTACTGAGCAAGT
TGctggggaagacgagggagaagtTCTTATGGGCAATGAAGCACGAGAGC
CGGCGAGGTCGGCGCCCAGAGAAACTTCCGTCTCCCAGGATCAACCGGGG
CCCGACTCGTCACGAGCTGCGCCTGCCGCATCTAATATTGCCGCCACTcc
aaagaaggaaggaccaCAATCCCCGAACACACGTACCAGATCTCAAGCTC
CGGGCGACTTGGAGGCTGAGGATAGTCTGAGCATCCCTGCGCTTCGACGT
GCGAGGGTGGAGGAtgccttcacctccttgcGCTTCGCCTTGGACCACGA
CTTATTTCTGGGCTCGAAAGTCCTCAGGGGTCAGGCCTTAAGTAGCCTGC
GCGATTTGCTGCACGTGCTGTCCCTGCTTTTCCCGGGAGGGCCACGACGC
CGACTCTTCCGAGGCTTACTGGAGGCCGTGTACCCCTTGAAGGAGATCGG
CATCGCAGAGTGGGAAGACTTACTTGCCCGGCACCTTGATCCAGTGCTCC
CATCCCTGCACGCTgcgagcagggcgggaggagaaggtggtgaagggggg
gaaagggcaagcaAGCGGTCCTACGAGTGGGCGGTCTGTGGGCGGGAGGC
TGGCTACACGTGCGGCCTCTGGACgctctttcacctcctctccgtgAAGA
GCGCCGTCCGCGCCCGCGACAaggccgcctcttcctccacgagtGTGGTC
TCCCCTCTTAACGTCCTGCTGGTGATCGAGGGCTTCGTCTCGAACTTCTT
CGGCTGCCAGGAGTGCAGGGACCACTTCCTGAATGCCTTCGAGGAAACGC
GGGGCCGGTGGGCGGACAGGGGGCCCAAGGGGGCGGTCTGGTGGGTCTAC
GACCTGCACGACAAAGTGAACGTGCGCCTGGGAAAGCGGCGGTGGCCGCC
GGTGAGGAAGTGTCCGAGGTGctggggcaaggagggggccagTGGGGAGC
CGGAGTGGGAGGCGCTCTACGAGGAAATGGTGAAGGGATACGACGTGCAC
GACACAgagacggcgggggaagatAGGGCGATGGGGGGCCAGGTGCGGAG
CATCGGGGAGCTGGCGGCCTTGTCGCGGGACTACGCGTTCGTGAGCGGCA
TCATGCTCGTCCTCTGCTTCGCCTTCTGCGTGCGGTTGCGCAAGAAACTC
CGGACCGGTCGGCGGAAAAAATGGGATACGATGCTGCCCATGTAG back to top
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