EWM21601.1, cds9074 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21601.1 vs. NCBI_GenBank
Match: gi|585101856|gb|EWM21601.1| (ccr4-not transcription complex subunit [Nannochloropsis gaditana]) HSP 1 Score: 1811.58 bits (4691), Expect = 0.000e+0 Identity = 900/900 (100.00%), Postives = 900/900 (100.00%), Query Frame = 0 Query: 1 MSLSQSDEEEEEEHCPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNKLCPACRTPYGDDPHIFSPVDKDEIIKKRKEKKARERAERREREREREKLERRERERDRDIGRPDRDRRDTGVGAIAGSSTSTTTHSTSYLLSPSNGLSHPLHHPLSMALPPPQAPPPPPSSSTHVVDRSTLRNIRVVQRNLAYVLGLPASLASEETLRRPEYFGQYGKIVKVAVTRPAVPPAASGVPGCSAYVTFAHKEDARACIQALDNFVLPVSEGGNGAGRPIRASFGTTKYCNTFLRHVPCNNPECLFLHEVEDDSEGWTREDAIAWQTRMPGSTPGAQVMVGQGGPSGTGRRVAAPIFPPPRWEEPSGGGGGQAYAMPSTTVTAAGNTRQRPGAARPPANPWNQQQQQHPHQHQQQELERQQPVHSHGSLSSQAPPAKAGLLATSTAPSRGPTAHPPTQPARANSISSHKQQQQQSLPPYLVSPSPEMAPGREAATNGPGLGNAAVTGLPQPPPGIISPPQTPNPGGPSLGVLPFDLAAGGSGGLLWSMEGIVQHNGDVGISTDSASELGQEGAEGASPPSLTLFGGEDRLGGIEGMPLPGVREEGGEARKQVRPPGPPGPKVSEKTIQPPLRGGLLSMLWAGGGSSSSGNSQGVLGSGRPFSKAPGLSSSSGESLAEESGSNGGHGALQHPGTHLLFSAFPFAGTGVGEGQKRSGLLGHAGAGSLDRTETGTIGGARTGRGNKDARREAFTATECLVSLLGLDLPDAPSSLSARTRACPPPQQPPVPSSTQAPSSRYSFATEEGGAGGDKAAEGVTGMTRGYVGAGSGEASGSLYPSLRSGVALLQQLLPNCSITYGDGAGTPAHTAGALSSSSGTPSGNSGHVTNSGADKDGRGQGLRPVF 900 MSLSQSDEEEEEEHCPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNKLCPACRTPYGDDPHIFSPVDKDEIIKKRKEKKARERAERREREREREKLERRERERDRDIGRPDRDRRDTGVGAIAGSSTSTTTHSTSYLLSPSNGLSHPLHHPLSMALPPPQAPPPPPSSSTHVVDRSTLRNIRVVQRNLAYVLGLPASLASEETLRRPEYFGQYGKIVKVAVTRPAVPPAASGVPGCSAYVTFAHKEDARACIQALDNFVLPVSEGGNGAGRPIRASFGTTKYCNTFLRHVPCNNPECLFLHEVEDDSEGWTREDAIAWQTRMPGSTPGAQVMVGQGGPSGTGRRVAAPIFPPPRWEEPSGGGGGQAYAMPSTTVTAAGNTRQRPGAARPPANPWNQQQQQHPHQHQQQELERQQPVHSHGSLSSQAPPAKAGLLATSTAPSRGPTAHPPTQPARANSISSHKQQQQQSLPPYLVSPSPEMAPGREAATNGPGLGNAAVTGLPQPPPGIISPPQTPNPGGPSLGVLPFDLAAGGSGGLLWSMEGIVQHNGDVGISTDSASELGQEGAEGASPPSLTLFGGEDRLGGIEGMPLPGVREEGGEARKQVRPPGPPGPKVSEKTIQPPLRGGLLSMLWAGGGSSSSGNSQGVLGSGRPFSKAPGLSSSSGESLAEESGSNGGHGALQHPGTHLLFSAFPFAGTGVGEGQKRSGLLGHAGAGSLDRTETGTIGGARTGRGNKDARREAFTATECLVSLLGLDLPDAPSSLSARTRACPPPQQPPVPSSTQAPSSRYSFATEEGGAGGDKAAEGVTGMTRGYVGAGSGEASGSLYPSLRSGVALLQQLLPNCSITYGDGAGTPAHTAGALSSSSGTPSGNSGHVTNSGADKDGRGQGLRPVF Sbjct: 1 MSLSQSDEEEEEEHCPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNKLCPACRTPYGDDPHIFSPVDKDEIIKKRKEKKARERAERREREREREKLERRERERDRDIGRPDRDRRDTGVGAIAGSSTSTTTHSTSYLLSPSNGLSHPLHHPLSMALPPPQAPPPPPSSSTHVVDRSTLRNIRVVQRNLAYVLGLPASLASEETLRRPEYFGQYGKIVKVAVTRPAVPPAASGVPGCSAYVTFAHKEDARACIQALDNFVLPVSEGGNGAGRPIRASFGTTKYCNTFLRHVPCNNPECLFLHEVEDDSEGWTREDAIAWQTRMPGSTPGAQVMVGQGGPSGTGRRVAAPIFPPPRWEEPSGGGGGQAYAMPSTTVTAAGNTRQRPGAARPPANPWNQQQQQHPHQHQQQELERQQPVHSHGSLSSQAPPAKAGLLATSTAPSRGPTAHPPTQPARANSISSHKQQQQQSLPPYLVSPSPEMAPGREAATNGPGLGNAAVTGLPQPPPGIISPPQTPNPGGPSLGVLPFDLAAGGSGGLLWSMEGIVQHNGDVGISTDSASELGQEGAEGASPPSLTLFGGEDRLGGIEGMPLPGVREEGGEARKQVRPPGPPGPKVSEKTIQPPLRGGLLSMLWAGGGSSSSGNSQGVLGSGRPFSKAPGLSSSSGESLAEESGSNGGHGALQHPGTHLLFSAFPFAGTGVGEGQKRSGLLGHAGAGSLDRTETGTIGGARTGRGNKDARREAFTATECLVSLLGLDLPDAPSSLSARTRACPPPQQPPVPSSTQAPSSRYSFATEEGGAGGDKAAEGVTGMTRGYVGAGSGEASGSLYPSLRSGVALLQQLLPNCSITYGDGAGTPAHTAGALSSSSGTPSGNSGHVTNSGADKDGRGQGLRPVF 900
BLAST of EWM21601.1 vs. NCBI_GenBank
Match: gi|1210517815|dbj|GAX23216.1| (CCR4-NOT transcription complex subunit 4 [Fistulifera solaris]) HSP 1 Score: 265.388 bits (677), Expect = 3.355e-73 Identity = 149/376 (39.63%), Postives = 211/376 (56.12%), Query Frame = 0 Query: 9 EEEEEHCPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNKLCPACRTPYGDDPHIFSPVDKDEIIKKRKEKKARERAERREREREREKLERRERERDRDIGRPDRDRRDTGVGAIAGSSTSTTTHSTSYLLSPSNGLSHPLHHPLSMALPPPQAPPPPPSSSTHVVDRSTLRNIRVVQRNLAYVLGLPASLASEETLRRPEYFGQYGKIVKVAVTRPAVPPAASGVPG----CSAYVTFAHKEDARACIQALDNFVLPVSEGGNGAGRPIRASFGTTKYCNTFLRHVPCNNPECLFLHEVEDDSEGWTRED------------------AIAWQTRMPGSTPGAQVMVGQGGPSGTGRRVAAPIFPPPRWEE 362 ++ + CPLCCE LD++DR F+PC C YQ+C +CW+ I+E+ + LCPACRTPYG+DPH FS VD ++++K KAR+ A +R++++E L + + G P+ + G SN ++M +P DRS L N+RV++RNL Y +GLPAS+ASE+ LR+PEYFGQYGKI K+ + R A SG PG SAYVTF HKED ACI ALD F L R IRAS+GT+KYC+ F++ V CNNPEC +LHE+ + +T+++ ++ Q R+ ++ + VG GGPSGTGR ++P+FPPP ++E Sbjct: 2 DDADHVCPLCCEELDLSDREFYPCKCGYQVCMWCWHRIRESESGLCPACRTPYGEDPHQFSAVDVEDVLKA---NKARDAALKRQKQQEGGMLSASQHD-----GVPNSIVTEDG----------------------SN---------VAMEVPK---------------DRSQLANMRVIRRNLVYAVGLPASIASEDVLRKPEYFGQYGKIAKIVINR-----AISGEPGRRASASAYVTFVHKEDTLACILALDGFYLD--------NRNIRASYGTSKYCSAFIKSVRCNNPECTYLHEMGAAEDTFTKQEIQAGYVTSGRDVLARQQQIVSEQLRLNATSAVPRKRVGGGGPSGTGRASSSPVFPPPEFDE 310
BLAST of EWM21601.1 vs. NCBI_GenBank
Match: gi|1210530867|dbj|GAX10407.1| (CCR4-NOT transcription complex subunit 4 [Fistulifera solaris]) HSP 1 Score: 260.381 bits (664), Expect = 1.995e-71 Identity = 129/311 (41.48%), Postives = 179/311 (57.56%), Query Frame = 0 Query: 9 EEEEEHCPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNKLCPACRTPYGDDPHIFSPVDKDEIIKKRKEKKARERAERREREREREKLERRERERDRDIGRPDRDRRDTGVGAIAGSSTSTTTHSTSYLLSPSNGLSHPLHHPLSMALPPPQAPPPPPSSSTHVVDRSTLRNIRVVQRNLAYVLGLPASLASEETLRRPEYFGQYGKIVKVAVTRPAVPPAASGVPGCSAYVTFAHKEDARACIQALDNFVLPVSEGGNGAGRPIRASFGTTKYCNTFLRHVPCNNPECLFLHEVEDDSEGWTRED 319 ++ + CPLCCE LD++DR F+PC C YQ+C +CW+ I+E+ + LCPACRTPYG+DPH FS VD ++++K KAR+ A +R++++E L + E G P+ ++A S T M +P DRS L N+RV++RNL Y +GLPAS+ASE+ LR+PEYFGQYGKI K+ + R A+ A SAYVTF HKED ACI ALD F L R IRAS+GT+KYC+ F++ V CNNPEC +LHE+ + +T+++ Sbjct: 2 DDADHVCPLCCEELDLSDREFYPCKCGYQVCMWCWHRIRESESGLCPACRTPYGEDPHQFSAVDVEDVLKA---NKARDAALKRQKQQEGGMLSASQHE-----GLPN---------SVANEDVSNVT----------------------MEVPK---------------DRSQLANMRVIRRNLVYAVGLPASIASEDVLRKPEYFGQYGKIAKIVINR-AISGDAGRRASASAYVTFVHKEDTLACILALDGFYLD--------NRNIRASYGTSKYCSAFIKSVRCNNPECTYLHEMGATEDTFTKQE 249
BLAST of EWM21601.1 vs. NCBI_GenBank
Match: gi|1205960150|ref|XP_021317280.1| (uncharacterized protein LOC8059223 isoform X2 [Sorghum bicolor] >gi|992166048|gb|EES07837.2| hypothetical protein SORBI_3005G001000 [Sorghum bicolor]) HSP 1 Score: 200.675 bits (509), Expect = 2.741e-49 Identity = 123/401 (30.67%), Postives = 189/401 (47.13%), Query Frame = 0 Query: 9 EEEEEHCPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNKLCPACRTPYGDDPHIFSPVDKDEIIKKRKEKKARERAERREREREREKLERRERERDRDIGRPDRDRRDTGVGAIAGSSTSTTTHSTSYLLSPSNGLSHPLHHPLSMALPPPQAPPPPPSSSTHVVDRSTLRNIRVVQRNLAYVLGLPASLASEETLRRPEYFGQYGKIVKVAVTRPAVPPA-ASGVPGCSAYVTFAHKEDARACIQALDNFVLPVSEGGNGAGRPIRASFGTTKYCNTFLRHVPCNNPECLFLHEVEDDSEGWTREDAIAWQTRMPGSTPGAQVMVGQGGPSGTGRRVAAPIFPPPRWEEPSGGGGGQAYAMPSTTVTAAGNTRQRP------GAARPPANPWNQQ 402 ++ + CPLC E +DITD+ PC C Y IC +CW+HI + + +++E + R A R +++R + + DR + + +++ H T + P+A PPP + ST V + L ++RV+QRNL Y++GLPA L +E L R EYFGQYGK++KV+V+RP PP+ AS S Y+T+A +E+A CIQA+ NFVL G+ +RA FGTTKYC+ +LR++ C NP+CL+LH+V + +T+++ I+ TR V Q S + RR + PPP + + + T+ R P + PPA W Q+ Sbjct: 6 DDGDRTCPLCAEEMDITDQQLKPCKCGYDICVWCWHHIID----------------------------MAEKEETEGRCPACRTRYDKDR--IVKMAATCDRTVAEKNVEKK----------------HKTQKV--------------------KPKAAPPPTTMST-VESKKHLASVRVIQRNLVYIIGLPAHLCNESVLERREYFGQYGKVLKVSVSRPTGPPSQASANSNISVYITYAKEEEAIRCIQAVHNFVL--------EGKVLRACFGTTKYCHAWLRNMTCGNPDCLYLHDVGSQEDSFTKDEIISAYTR---------TRVPQMASSVSQRRTGT-VLPPPGDDFSYSAVVSAKHTFKNGTLNTTNQPRLSPPNSSSGRSTLPPAASWGQR 321
BLAST of EWM21601.1 vs. NCBI_GenBank
Match: gi|1174550549|gb|OQU78567.1| (hypothetical protein SORBI_3008G001200 [Sorghum bicolor]) HSP 1 Score: 200.29 bits (508), Expect = 2.966e-49 Identity = 115/351 (32.76%), Postives = 174/351 (49.57%), Query Frame = 0 Query: 9 EEEEEHCPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNKLCPACRTPYGDDPHIFSPVDKDEIIKKRKEKKARERAERREREREREKLERRERERDRDIGRPDRDRRDTGVGAIAGSSTSTTTHSTSYLLSPSNGLSHPLHHPLSMALPPPQAPPPPPSSSTHVVDRSTLRNIRVVQRNLAYVLGLPASLASEETLRRPEYFGQYGKIVKVAVTRPAVPPA-ASGVPGCSAYVTFAHKEDARACIQALDNFVLPVSEGGNGAGRPIRASFGTTKYCNTFLRHVPCNNPECLFLHEVEDDSEGWTREDAIAWQTRMPGSTPGAQVMVGQGGPSGTGRRVAAPIFPPP 358 ++ + CPLC E +DITD+ PC C Y IC +CW+HI + + +++E + R A R +++R + + DR + + +++ H T + P+A PPP + ST V + L ++RV+QRNL Y++GLPA L E L R EYFGQYGK++KV+V+RP PP+ AS S Y+T+A +E+A CIQA+ NFVL G+ +RA FGTTKYC+ +LR++ C NP+CL+LH+V + +T+++ I+ TR V Q S + RR + PPP Sbjct: 6 DDGDRTCPLCAEEMDITDQQLKPCKCGYDICVWCWHHIID----------------------------MAEKEETEGRCPACRTRYDKDR--IVKMAATCDRTVAEKNAEKK----------------HKTQKV--------------------KPKAAPPPTAMST-VESKKHLASVRVIQRNLVYIIGLPAHLCHESVLERREYFGQYGKVLKVSVSRPTGPPSQASANSNISVYITYAKEEEAIRCIQAVHNFVL--------EGKVLRACFGTTKYCHAWLRNITCGNPDCLYLHDVGSQEDSFTKDEIISAYTR---------TRVPQMASSVSQRRTGT-VLPPP 271
BLAST of EWM21601.1 vs. NCBI_GenBank
Match: gi|1205978046|ref|XP_021302337.1| (uncharacterized protein LOC110429916 [Sorghum bicolor] >gi|1205978048|ref|XP_021302338.1| uncharacterized protein LOC110429916 [Sorghum bicolor] >gi|992159872|gb|KXG22747.1| hypothetical protein SORBI_3008G001200 [Sorghum bicolor] >gi|992159873|gb|KXG22748.1| hypothetical protein SORBI_3008G001200 [Sorghum bicolor]) HSP 1 Score: 200.29 bits (508), Expect = 3.098e-49 Identity = 115/351 (32.76%), Postives = 174/351 (49.57%), Query Frame = 0 Query: 9 EEEEEHCPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNKLCPACRTPYGDDPHIFSPVDKDEIIKKRKEKKARERAERREREREREKLERRERERDRDIGRPDRDRRDTGVGAIAGSSTSTTTHSTSYLLSPSNGLSHPLHHPLSMALPPPQAPPPPPSSSTHVVDRSTLRNIRVVQRNLAYVLGLPASLASEETLRRPEYFGQYGKIVKVAVTRPAVPPA-ASGVPGCSAYVTFAHKEDARACIQALDNFVLPVSEGGNGAGRPIRASFGTTKYCNTFLRHVPCNNPECLFLHEVEDDSEGWTREDAIAWQTRMPGSTPGAQVMVGQGGPSGTGRRVAAPIFPPP 358 ++ + CPLC E +DITD+ PC C Y IC +CW+HI + + +++E + R A R +++R + + DR + + +++ H T + P+A PPP + ST V + L ++RV+QRNL Y++GLPA L E L R EYFGQYGK++KV+V+RP PP+ AS S Y+T+A +E+A CIQA+ NFVL G+ +RA FGTTKYC+ +LR++ C NP+CL+LH+V + +T+++ I+ TR V Q S + RR + PPP Sbjct: 6 DDGDRTCPLCAEEMDITDQQLKPCKCGYDICVWCWHHIID----------------------------MAEKEETEGRCPACRTRYDKDR--IVKMAATCDRTVAEKNAEKK----------------HKTQKV--------------------KPKAAPPPTAMST-VESKKHLASVRVIQRNLVYIIGLPAHLCHESVLERREYFGQYGKVLKVSVSRPTGPPSQASANSNISVYITYAKEEEAIRCIQAVHNFVL--------EGKVLRACFGTTKYCHAWLRNITCGNPDCLYLHDVGSQEDSFTKDEIISAYTR---------TRVPQMASSVSQRRTGT-VLPPP 271
BLAST of EWM21601.1 vs. NCBI_GenBank
Match: gi|901868230|gb|KMZ84609.1| (hypothetical protein PVBG_00389 [Plasmodium vivax Brazil I]) HSP 1 Score: 187.578 bits (475), Expect = 6.087e-45 Identity = 99/312 (31.73%), Postives = 164/312 (52.56%), Query Frame = 0 Query: 15 CPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNKLCPACRTPYGDDPHIFSPVDKDEIIKKRKEKKARERAERREREREREKLERRERERDRDIGRPDRDRRDTGVGAIAGSSTST-TTHSTSYLLSPSNGLSHPLHHPLSMALPPPQAPPPPPSSSTHVVDR-----STLRNIRVVQRNLAYVLGLPASLASEETLRRPEYFGQYGKIVKVAVTRP-AVPPAASGVPGCSAYVTFAHKEDARACIQALDNFVLPVSEGGNGAGRPIRASFGTTKYCNTFLRHVPCNNPECLFLHEVEDDSEGWTRED 319 CPLC E LD TDRNFFPC C YQIC +C +I++++ CPACR Y + I++ ++++KK+K + + + + G A G S ST ++ST SPS S LHH + P S++T+ + ++ IRVVQRNL +V+G+ ++ A + L++ EYFG+YG+I+ + V + A P +G P SAY+T++++++A I +D VL + ++ASFGTTKYC +L++ C N +C +LH++ + + ++++D Sbjct: 198 CPLCVEVLDETDRNFFPCDCGYQICLWCLYYIRDHMCNKCPACRRSYDEKNFIYNRETHEKLVKKQKSGHSHGHNHNHKGSK---------------ADASSSSNNNVGASAPNGVSGSTGVSNSTGANASPSAANSSLLHHLSGSSSAIFNKPELYKSANTYNIHEHENLFEIIKGIRVVQRNLVFVIGITSNYAKKNILKKNEYFGKYGQILNIIVNKSQAYNPHYNG-PSFSAYITYSNEKEAINAIYFIDGMVLD--------SKTLKASFGTTKYCAAYLKNSTCTNEDCFYLHQLGNVIDSFSKDD 485
BLAST of EWM21601.1 vs. NCBI_GenBank
Match: gi|901858305|gb|KMZ77447.1| (hypothetical protein PVIIG_01417 [Plasmodium vivax India VII]) HSP 1 Score: 187.193 bits (474), Expect = 8.572e-45 Identity = 99/312 (31.73%), Postives = 164/312 (52.56%), Query Frame = 0 Query: 15 CPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNKLCPACRTPYGDDPHIFSPVDKDEIIKKRKEKKARERAERREREREREKLERRERERDRDIGRPDRDRRDTGVGAIAGSSTST-TTHSTSYLLSPSNGLSHPLHHPLSMALPPPQAPPPPPSSSTHVVDR-----STLRNIRVVQRNLAYVLGLPASLASEETLRRPEYFGQYGKIVKVAVTRP-AVPPAASGVPGCSAYVTFAHKEDARACIQALDNFVLPVSEGGNGAGRPIRASFGTTKYCNTFLRHVPCNNPECLFLHEVEDDSEGWTRED 319 CPLC E LD TDRNFFPC C YQIC +C +I++++ CPACR Y + I++ ++++KK+K + + + + G A G S ST ++ST SPS S LHH + P S++T+ + ++ IRVVQRNL +V+G+ ++ A + L++ EYFG+YG+I+ + V + A P +G P SAY+T++++++A I +D VL + ++ASFGTTKYC +L++ C N +C +LH++ + + ++++D Sbjct: 198 CPLCVEVLDETDRNFFPCDCGYQICLWCLYYIRDHMCNKCPACRRSYDEKNFIYNRETHEKLVKKQKSGHSHGHNHNHKGSK---------------ADASSSSNNNVGASAPNGVSGSTGVSNSTGANASPSAANSSLLHHLSGSSSAIFNKPELYKSANTYNIHEHENLFEIIKGIRVVQRNLVFVIGITSNYAKKNILKKNEYFGKYGQILNIIVNKSQAYNPHYNG-PSFSAYITYSNEKEAINAIYFIDGMVLD--------SKTLKASFGTTKYCAAYLKNSTCTNEDCFYLHQLGNVIDSFSKDD 485
BLAST of EWM21601.1 vs. NCBI_GenBank
Match: gi|156095709|ref|XP_001613889.1| (hypothetical protein [Plasmodium vivax Sal-1] >gi|148802763|gb|EDL44162.1| hypothetical protein, conserved [Plasmodium vivax]) HSP 1 Score: 186.422 bits (472), Expect = 1.497e-44 Identity = 99/312 (31.73%), Postives = 164/312 (52.56%), Query Frame = 0 Query: 15 CPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNKLCPACRTPYGDDPHIFSPVDKDEIIKKRKEKKARERAERREREREREKLERRERERDRDIGRPDRDRRDTGVGAIAGSSTST-TTHSTSYLLSPSNGLSHPLHHPLSMALPPPQAPPPPPSSSTHVVDR-----STLRNIRVVQRNLAYVLGLPASLASEETLRRPEYFGQYGKIVKVAVTRP-AVPPAASGVPGCSAYVTFAHKEDARACIQALDNFVLPVSEGGNGAGRPIRASFGTTKYCNTFLRHVPCNNPECLFLHEVEDDSEGWTRED 319 CPLC E LD TDRNFFPC C YQIC +C +I++++ CPACR Y + I++ ++++KK+K + + + + G A G S ST ++ST SPS S LHH + P S++T+ + ++ IRVVQRNL +V+G+ ++ A + L++ EYFG+YG+I+ + V + A P +G P SAY+T++++++A I +D VL + ++ASFGTTKYC +L++ C N +C +LH++ + + ++++D Sbjct: 198 CPLCVEVLDETDRNFFPCDCGYQICLWCLYYIRDHMCNKCPACRRSYDEKNFIYNRETHEKLVKKQKSGHSHGHNHKGSK-----------------ADASSSSNNNVGASAPNGVSGSTGVSNSTGANASPSAANSSLLHHLSGSSSAIFNKPELYKSANTYNIHEHENLFEIIKGIRVVQRNLVFVIGITSNYAKKNILKKNEYFGKYGQILNIIVNKSQAYNPHYNG-PSFSAYITYSNEKEAINAIYFIDGMVLD--------SKTLKASFGTTKYCAAYLKNSTCTNEDCFYLHQLGNVIDSFSKDD 483
BLAST of EWM21601.1 vs. NCBI_GenBank
Match: gi|1074125592|emb|SCO75600.1| (CCR4-NOT transcription complex subunit 4, putative [Plasmodium vivax]) HSP 1 Score: 186.422 bits (472), Expect = 1.563e-44 Identity = 98/312 (31.41%), Postives = 164/312 (52.56%), Query Frame = 0 Query: 15 CPLCCETLDITDRNFFPCPCEYQICCYCWNHIKENLNKLCPACRTPYGDDPHIFSPVDKDEIIKKRKEKKARERAERREREREREKLERRERERDRDIGRPDRDRRDTGVGAIAGSSTST-TTHSTSYLLSPSNGLSHPLHHPLSMALPPPQAPPPPPSSSTHVVDR-----STLRNIRVVQRNLAYVLGLPASLASEETLRRPEYFGQYGKIVKVAVTRP-AVPPAASGVPGCSAYVTFAHKEDARACIQALDNFVLPVSEGGNGAGRPIRASFGTTKYCNTFLRHVPCNNPECLFLHEVEDDSEGWTRED 319 CPLC E LD TDRNFFPC C YQIC +C +I++++ CPACR Y + I++ ++++KK+K + + + + G A G S ST ++ST SPS S LHH + P +++T+ + ++ IRVVQRNL +V+G+ ++ A + L++ EYFG+YG+I+ + V + A P +G P SAY+T++++++A I +D VL + ++ASFGTTKYC +L++ C N +C +LH++ + + ++++D Sbjct: 169 CPLCVEVLDETDRNFFPCDCGYQICLWCLYYIRDHMCNKCPACRRSYDEKNFIYNRETHEKLVKKQKSGHSHGHNHNHKGSK---------------ADASSSSNNNVGASAPNGVSGSTGVSNSTGANASPSAANSSLLHHLSGSSSAIFNKPELYKNANTYNIHEHENLFEIIKGIRVVQRNLVFVIGITSNYAKKNILKKNEYFGKYGQILNIIVNKSQAYNPHYNG-PSFSAYITYSNEKEAINAIYFIDGMVLD--------SKTLKASFGTTKYCAAYLKNSTCTNEDCFYLHQLGNVIDSFSKDD 456 The following BLAST results are available for this feature:
BLAST of EWM21601.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|