EWM21662.1, cds9011 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21662.1 vs. NCBI_GenBank
Match: gi|585101923|gb|EWM21662.1| (adaptor protein kanadaptin, partial [Nannochloropsis gaditana]) HSP 1 Score: 518.464 bits (1334), Expect = 0.000e+0 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0 Query: 1 MEPPAPRRPPPLPKTDTVPPASASAQAPPHPNSTISSAYMPPSWGGRPSPSEPAVTLEVLRNGVEVDRLDLFASPTPSKPYVPADTASSQTPSSCQHYYTFGRLPGAVNFVLDNPTVSRVHAVCQFRKADGTLHVQDLGSTHGTYLNKQRLPPRSWESLHVGDILQFGQSTRLYVVSGPEVLGRPEVEDEKLEAYRTERAKVRAWREARRRKKEGLAAGQGPEEAGEEEGGISWGLGEDAEREEEEEEVEGGAGGRG 257 MEPPAPRRPPPLPKTDTVPPASASAQAPPHPNSTISSAYMPPSWGGRPSPSEPAVTLEVLRNGVEVDRLDLFASPTPSKPYVPADTASSQTPSSCQHYYTFGRLPGAVNFVLDNPTVSRVHAVCQFRKADGTLHVQDLGSTHGTYLNKQRLPPRSWESLHVGDILQFGQSTRLYVVSGPEVLGRPEVEDEKLEAYRTERAKVRAWREARRRKKEGLAAGQGPEEAGEEEGGISWGLGEDAEREEEEEEVEGGAGGRG Sbjct: 1 MEPPAPRRPPPLPKTDTVPPASASAQAPPHPNSTISSAYMPPSWGGRPSPSEPAVTLEVLRNGVEVDRLDLFASPTPSKPYVPADTASSQTPSSCQHYYTFGRLPGAVNFVLDNPTVSRVHAVCQFRKADGTLHVQDLGSTHGTYLNKQRLPPRSWESLHVGDILQFGQSTRLYVVSGPEVLGRPEVEDEKLEAYRTERAKVRAWREARRRKKEGLAAGQGPEEAGEEEGGISWGLGEDAEREEEEEEVEGGAGGRG 257
BLAST of EWM21662.1 vs. NCBI_GenBank
Match: gi|1025047467|ref|XP_016446761.1| (PREDICTED: kanadaptin-like [Nicotiana tabacum]) HSP 1 Score: 129.413 bits (324), Expect = 3.810e-32 Identity = 79/209 (37.80%), Postives = 111/209 (53.11%), Query Frame = 0 Query: 39 YMPPSWGGRPSPSEPAVTLEVLRNGVEVDRLDLFASPTPSKPYVPADTASSQTPSSCQHYYTFGRLPGAVNFVLDNPTVSRVHAVCQFRKADGTLHVQDLGSTHGTYLNKQRLPPRSWESLHVGDILQFGQSTRLYVVSGPEVLGRPEVEDEKLEAYRTERAKVRAWREARRRKKEGLAAGQGPEEAGEEEGGISWGLGEDAEREEEEE 247 Y P+W GRP LEVL++G +D+ D+ Y FGR+ +FVL++PT+SR HAV QFR G ++ DLGSTHGT++NK ++ R++ LHVGD+L+FG S+RLY+ GP L PE + + R ++AK+R E + + L A A GISWG+GEDA E E+E Sbjct: 89 YTIPTWSGRPCHQ---FYLEVLKDGSIIDQFDVHKKGA----------------------YMFGRV-DLCDFVLEHPTISRFHAVLQFR-GSGNAYLYDLGSTHGTFINKNQVEKRNYVELHVGDVLRFGNSSRLYIFQGPTDLMPPEADLK-----RIKQAKIR--EEVQDMEASLLRAKLEASRA----DGISWGMGEDAIEENEDE 259
BLAST of EWM21662.1 vs. NCBI_GenBank
Match: gi|659111073|ref|XP_008455566.1| (PREDICTED: kanadaptin [Cucumis melo]) HSP 1 Score: 130.568 bits (327), Expect = 9.354e-31 Identity = 82/232 (35.34%), Postives = 118/232 (50.86%), Query Frame = 0 Query: 15 TDTVPPASASAQ------APPHPNSTISSAYMPPSWGGRPSPSEPAVTLEVLRNGVEVDRLDLFASPTPSKPYVPADTASSQTPSSCQHYYTFGRLPGAVNFVLDNPTVSRVHAVCQFRKADGTLHVQDLGSTHGTYLNKQRLPPRSWESLHVGDILQFGQSTRLYVVSGPEVLGRPEVEDEKLEAYRTERAKVRAWREARRRKKEGLAAGQGPEEAGEEEGGISWGLGEDA 240 T+ V SASA A P S +S Y PSW G PS LEVL++G VD+L+++ Y FGR+ +FVL++PT+SR HAV QFR ++G ++ DLGSTHG+++NK ++ R + LHVGD+++FG S+RLY+ GP L PE + ++ + + RR ++E A GISWG+GEDA Sbjct: 80 TEKVSDGSASASDKAVELASKQPQS-VSVPYTIPSWSGVPSHR---FYLEVLKDGCIVDQLNVYEKGA----------------------YMFGRVD-LCDFVLEHPTISRFHAVLQFR-SNGDAYLYDLGSTHGSFINKNQVKKRVFVDLHVGDVIRFGHSSRLYIFQGPNHLMLPEADLTLMKKAKMREETLEREASLRRARQEASLA-----------DGISWGMGEDA 272
BLAST of EWM21662.1 vs. NCBI_GenBank
Match: gi|731418089|ref|XP_002278556.2| (PREDICTED: kanadaptin [Vitis vinifera]) HSP 1 Score: 130.568 bits (327), Expect = 9.935e-31 Identity = 91/248 (36.69%), Postives = 131/248 (52.82%), Query Frame = 0 Query: 13 PKTDTVPP---ASASAQAPPHPNST----ISSAYMP---PSWGGRPSPSEPAVTLEVLRNGVEVDRLDLFASPTPSKPYVPADTASSQTPSSCQHYYTFGRLPGAVNFVLDNPTVSRVHAVCQFRKADGTLHVQDLGSTHGTYLNKQRLPPRSWESLHVGDILQFGQSTRLYVVSGPEVLGRPEVEDEKLEAYRTERAKVRAWREA---RRRKKEGLAAGQGPEEAGEEEGGISWGLGEDAEREEEEE 247 P+T+ P AS S+ P NST SA +P PSW P S LEVL++G +D+LD++ + Y FGR+ +FVL++PT+SR HAV QF++ +G ++ DLGSTHGT+LNK ++ + + LHVGD+++FG STRLYV GP L PE + +K+ + R ++ REA R R++ A GISWG+GEDA E E++ Sbjct: 138 PRTEASEPSTEASESSAMQPSNNSTHHQKTQSAAVPYTIPSWSEPPGHS---FYLEVLKDGSIIDQLDVYE----------------------KGAYMFGRV-DICDFVLEHPTISRFHAVLQFKR-NGAAYLYDLGSTHGTFLNKSQVKKKVYTELHVGDVIRFGLSTRLYVFQGPTELMLPESDLKKIREAKILREAMQD-REASLSRARREAAFA------------DGISWGMGEDAIEEPEDD 345
BLAST of EWM21662.1 vs. NCBI_GenBank
Match: gi|1083892781|ref|XP_018631506.1| (PREDICTED: kanadaptin isoform X3 [Nicotiana tomentosiformis]) HSP 1 Score: 130.183 bits (326), Expect = 1.255e-30 Identity = 79/209 (37.80%), Postives = 110/209 (52.63%), Query Frame = 0 Query: 39 YMPPSWGGRPSPSEPAVTLEVLRNGVEVDRLDLFASPTPSKPYVPADTASSQTPSSCQHYYTFGRLPGAVNFVLDNPTVSRVHAVCQFRKADGTLHVQDLGSTHGTYLNKQRLPPRSWESLHVGDILQFGQSTRLYVVSGPEVLGRPEVEDEKLEAYRTERAKVRAWREARRRKKEGLAAGQGPEEAGEEEGGISWGLGEDAEREEEEE 247 Y P+W GRP LEVL++G +D+ D+ Y FGR+ +FVL++PT+SR HAV QFR G ++ DLGSTHGT++NK ++ R++ LHVGD+L+FG S+RLY+ GP L PE + R ++AK+R E + + L A A GISWG+GEDA E E+E Sbjct: 89 YTIPTWSGRPCHQ---FYLEVLKDGSIIDQFDVHKKGA----------------------YMFGRV-DLCDFVLEHPTISRFHAVLQFR-GSGNAYLYDLGSTHGTFINKNQVEKRNYVELHVGDVLRFGNSSRLYIFQGPTDLMPPEA-----DLKRIKQAKIR--EEVQDMEASLLRAKLEASRA----DGISWGMGEDAIEENEDE 259
BLAST of EWM21662.1 vs. NCBI_GenBank
Match: gi|1083892779|ref|XP_018631505.1| (PREDICTED: kanadaptin isoform X2 [Nicotiana tomentosiformis]) HSP 1 Score: 129.798 bits (325), Expect = 1.598e-30 Identity = 79/209 (37.80%), Postives = 110/209 (52.63%), Query Frame = 0 Query: 39 YMPPSWGGRPSPSEPAVTLEVLRNGVEVDRLDLFASPTPSKPYVPADTASSQTPSSCQHYYTFGRLPGAVNFVLDNPTVSRVHAVCQFRKADGTLHVQDLGSTHGTYLNKQRLPPRSWESLHVGDILQFGQSTRLYVVSGPEVLGRPEVEDEKLEAYRTERAKVRAWREARRRKKEGLAAGQGPEEAGEEEGGISWGLGEDAEREEEEE 247 Y P+W GRP LEVL++G +D+ D+ Y FGR+ +FVL++PT+SR HAV QFR G ++ DLGSTHGT++NK ++ R++ LHVGD+L+FG S+RLY+ GP L PE + R ++AK+R E + + L A A GISWG+GEDA E E+E Sbjct: 89 YTIPTWSGRPCHQ---FYLEVLKDGSIIDQFDVHKKGA----------------------YMFGRV-DLCDFVLEHPTISRFHAVLQFR-GSGNAYLYDLGSTHGTFINKNQVEKRNYVELHVGDVLRFGNSSRLYIFQGPTDLMPPEA-----DLKRIKQAKIR--EEVQDMEASLLRAKLEASRA----DGISWGMGEDAIEENEDE 259
BLAST of EWM21662.1 vs. NCBI_GenBank
Match: gi|298204430|emb|CBI16910.3| (unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 128.257 bits (321), Expect = 4.415e-30 Identity = 83/223 (37.22%), Postives = 119/223 (53.36%), Query Frame = 0 Query: 30 HPNSTISSA--YMPPSWGGRPSPSEPAVTLEVLRNGVEVDRLDLFASPTPSKPYVPADTASSQTPSSCQHYYTFGRLPGAVNFVLDNPTVSRVHAVCQFRKADGTLHVQDLGSTHGTYLNKQRLPPRSWESLHVGDILQFGQSTRLYVVSGPEVLGRPEVEDEKLEAYRTERAKVRAWREA---RRRKKEGLAAGQGPEEAGEEEGGISWGLGEDAEREEEEE 247 H T S+A Y PSW P S LEVL++G +D+LD++ Y FGR+ +FVL++PT+SR HAV QF++ +G ++ DLGSTHGT+LNK ++ + + LHVGD+++FG STRLYV GP L PE + +K+ + R ++ REA R R++ A GISWG+GEDA E E++ Sbjct: 9 HHQKTQSAAVPYTIPSWSEPPGHS---FYLEVLKDGSIIDQLDVYEKGA----------------------YMFGRVD-ICDFVLEHPTISRFHAVLQFKR-NGAAYLYDLGSTHGTFLNKSQVKKKVYTELHVGDVIRFGLSTRLYVFQGPTELMLPESDLKKIREAKILREAMQD-REASLSRARREAAFA------------DGISWGMGEDAIEEPEDD 191
BLAST of EWM21662.1 vs. NCBI_GenBank
Match: gi|147779651|emb|CAN71737.1| (hypothetical protein VITISV_011557 [Vitis vinifera]) HSP 1 Score: 127.872 bits (320), Expect = 7.073e-30 Identity = 88/235 (37.45%), Postives = 123/235 (52.34%), Query Frame = 0 Query: 21 ASASAQAPPHPNST----ISSAYMP---PSWGGRPSPSEPAVTLEVLRNGVEVDRLDLFASPTPSKPYVPADTASSQTPSSCQHYYTFGRLPGAVNFVLDNPTVSRVHAVCQFRKADGTLHVQDLGSTHGTYLNKQRLPPRSWESLHVGDILQFGQSTRLYVVSGPEVLGRPEVEDEKLEAYRTERAKVRAWREA---RRRKKEGLAAGQGPEEAGEEEGGISWGLGEDAEREEE 245 AS S+ P NST SA +P PSW P S LEVL++G +D+LD++ + Y FGR+ +FVL++PT+SR HAV QF++ +G ++ DLGSTHGT+LNK ++ + + LHVGD++ FG STRLYV GP L PE + +K+ + R ++ REA R R++ A GISWG+GEDA E E Sbjct: 149 ASESSAMQPSNNSTHHQKTQSAAVPYTIPSWSEPPGHS---FYLEVLKDGSIIDQLDVYE----------------------KGAYMFGRV-DICDFVLEHPTISRFHAVLQFKR-NGAAYLYDLGSTHGTFLNKSQVKKKVYTELHVGDVIXFGLSTRLYVFQGPTELMLPESDLKKIREAKILREAMQD-REASLSRARREAAFA------------DGISWGMGEDAIEEPE 343
BLAST of EWM21662.1 vs. NCBI_GenBank
Match: gi|1142845009|gb|AQL03095.1| (SMAD/FHA domain-containing protein [Zea mays]) HSP 1 Score: 124.79 bits (312), Expect = 7.763e-30 Identity = 78/215 (36.28%), Postives = 116/215 (53.95%), Query Frame = 0 Query: 39 YMPPSWGGRPSPSEPAVTLEVLRNGVEVDRLDLFASPTPSKPYVPADTASSQTPSSCQHYYTFGRLPGAVNFVLDNPTVSRVHAVCQFRKADGTLHVQDLGSTHGTYLNKQRLPPRSWESLHVGDILQFGQSTRLYVVSGPEVLGRPEVEDEKLEAYRTERAKVRAWREA---RRRKKEGLAAGQGPEEAGEEEGGISWGLGEDAEREEEEEEVE 250 Y P W +PS+P LEVL++G VD+LD+ S + Y FGR+ +FVL++PT+SR HAV QFR DG + + DLGSTHG+++NK + + + +HVGD+++FGQS+RLY+ GP L PE + +KL R ++ + REA R + + LA GISWG+ +DA E E++ + Sbjct: 132 YAIPEWS--TAPSQP-FFLEVLKDGTIVDQLDV----------------------SKKGAYMFGRID-LCDFVLEHPTISRFHAVLQFRN-DGKVFLFDLGSTHGSFINKNLIKKKLYTEIHVGDVIRFGQSSRLYIFQGPSELMPPEKDLQKLRDARIQQDMLD--REASILRAKTQAALAE------------GISWGMTDDAIEESAEDDAD 305
BLAST of EWM21662.1 vs. NCBI_GenBank
Match: gi|1002860906|ref|XP_015694339.1| (PREDICTED: kanadaptin [Oryza brachyantha]) HSP 1 Score: 125.946 bits (315), Expect = 3.596e-29 Identity = 78/215 (36.28%), Postives = 117/215 (54.42%), Query Frame = 0 Query: 39 YMPPSWGGRPSPSEPAVTLEVLRNGVEVDRLDLFASPTPSKPYVPADTASSQTPSSCQHYYTFGRLPGAVNFVLDNPTVSRVHAVCQFRKADGTLHVQDLGSTHGTYLNKQRLPPRSWESLHVGDILQFGQSTRLYVVSGPEVLGRPEVEDEKLEAYRTERAKVRAWREA---RRRKKEGLAAGQGPEEAGEEEGGISWGLGEDAEREEEEEEVE 250 Y P W +P P LEVL++G VD+LD+ S + Y FGR+ +FVL++PT+SR HAV QFR +DG + + DLGSTHG+++NK ++ +++ +HVGD+++FGQS+RLY+ GP L PE + +KL R ++ + REA R + + LA GISWG+ EDA + E+E + Sbjct: 68 YAIPDWSA--APGHPFF-LEVLKDGTIVDKLDV----------------------SRKGAYMFGRID-LCDFVLEHPTISRFHAVLQFR-SDGEVFLYDLGSTHGSFINKTQVKKKTYVEIHVGDVIRFGQSSRLYIFQGPTELMPPEKDMQKLRDARIKQDMLD--REASLLRAKNQAALAE------------GISWGMSEDAVEDSAEDEAD 241 The following BLAST results are available for this feature:
BLAST of EWM21662.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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