EWM21738.1, cds8939 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21738.1 vs. NCBI_GenBank
Match: gi|585102067|gb|EWM21738.1| (gtpase obg [Nannochloropsis gaditana]) HSP 1 Score: 662.144 bits (1707), Expect = 0.000e+0 Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0 Query: 1 MCSTSQPTRRKKRWGGGSTSTSKGPLLLLVLLTGLCGQSIDAFLQVPSHRGSLSRRPASECVAAVTLPRSEIILKAGKRGGGGGKYDSPKRKQAHLQQKGLGRNDLPPASSPSSSPPADPPGVLWEGEEEGDDEDEEEMDAEILEFQGLMERGAFQLLDPDDVEIDEAYDAFDAEDEDEDEDEGEEGAEGGAERGESRPRNDPEWQFFDTAKVFVKGGDGGDGCVAFRREKYVDMGGPNGGSGGGGGSIYFRCDEGLNTLSGLRQKVHWKAGGGARGQGKSRTGATAPDVVVDVPPGTIVRTQDGTLAGQLVEHGERVGNRARSDGCRWN 330 MCSTSQPTRRKKRWGGGSTSTSKGPLLLLVLLTGLCGQSIDAFLQVPSHRGSLSRRPASECVAAVTLPRSEIILKAGKRGGGGGKYDSPKRKQAHLQQKGLGRNDLPPASSPSSSPPADPPGVLWEGEEEGDDEDEEEMDAEILEFQGLMERGAFQLLDPDDVEIDEAYDAFDAEDEDEDEDEGEEGAEGGAERGESRPRNDPEWQFFDTAKVFVKGGDGGDGCVAFRREKYVDMGGPNGGSGGGGGSIYFRCDEGLNTLSGLRQKVHWKAGGGARGQGKSRTGATAPDVVVDVPPGTIVRTQDGTLAGQLVEHGERVGNRARSDGCRWN Sbjct: 1 MCSTSQPTRRKKRWGGGSTSTSKGPLLLLVLLTGLCGQSIDAFLQVPSHRGSLSRRPASECVAAVTLPRSEIILKAGKRGGGGGKYDSPKRKQAHLQQKGLGRNDLPPASSPSSSPPADPPGVLWEGEEEGDDEDEEEMDAEILEFQGLMERGAFQLLDPDDVEIDEAYDAFDAEDEDEDEDEGEEGAEGGAERGESRPRNDPEWQFFDTAKVFVKGGDGGDGCVAFRREKYVDMGGPNGGSGGGGGSIYFRCDEGLNTLSGLRQKVHWKAGGGARGQGKSRTGATAPDVVVDVPPGTIVRTQDGTLAGQLVEHGERVGNRARSDGCRWN 330
BLAST of EWM21738.1 vs. NCBI_GenBank
Match: gi|553190281|ref|XP_005855160.1| (cathepsin l-like proteinase, partial [Nannochloropsis gaditana CCMP526] >gi|422293901|gb|EKU21201.1| cathepsin l-like proteinase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 288.5 bits (737), Expect = 8.593e-87 Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0 Query: 69 RSEIILKAGKRGGGGGKYDSPKRKQAHLQQKGLGRNDLPPASSPSSSPPADPPGVLWEGEEEGDDEDEEEMDAEILEFQGLMERGAFQLLDPDDVEIDEAYDAFDAEDEDEDEDEGEEGAEGGAERGESRPRNDPEWQFFDTAK 212 + EIILKAGKRGGGGGKYDSPKRKQAHLQQKGLGRNDLPPASSPSSSPPADPPGVLWEGEEEGDDEDEEEMDAEILEFQGLMERGAFQLLDPDDVEIDEAYDAFDAEDEDEDEDEGEEGAEGGAERGESRPRNDPEWQFFDTAK Sbjct: 101 KFEIILKAGKRGGGGGKYDSPKRKQAHLQQKGLGRNDLPPASSPSSSPPADPPGVLWEGEEEGDDEDEEEMDAEILEFQGLMERGAFQLLDPDDVEIDEAYDAFDAEDEDEDEDEGEEGAEGGAERGESRPRNDPEWQFFDTAK 244
BLAST of EWM21738.1 vs. NCBI_GenBank
Match: gi|298710555|emb|CBJ25619.1| (PObg1, plastid Obg/CgtA-like GTPase 1 [Ectocarpus siliculosus]) HSP 1 Score: 131.724 bits (330), Expect = 1.180e-30 Identity = 75/121 (61.98%), Postives = 91/121 (75.21%), Query Frame = 0 Query: 198 RPRNDPEWQFFDTAKVFVKGGDGGDGCVAFRREKYVDMGGPNGGSGGGGGSIYFRCDEGLNTLSGLRQKVHWKAGGGARGQGKSRTGATAPDVVVDVPPGTIVRTQDGTLAGQLVEHGERV 318 R RND EWQFFDTA++ VK G GG+GC+A RREK + MGGPNGGSGG GGSI+ RC EGLNTL+ +R KVH++A G GQGKSRTG + DV V P GT+VR Q+G L G+L EH + + Sbjct: 107 RARNDQEWQFFDTARINVKAGKGGNGCIATRREKGISMGGPNGGSGGRGGSIFLRCSEGLNTLAMVRHKVHYRATDGQNGQGKSRTGNSGADVYVSAPLGTVVRDQEGVLCGELTEHDQEL 227
BLAST of EWM21738.1 vs. NCBI_GenBank
Match: gi|873236539|emb|CEL99198.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 130.568 bits (327), Expect = 4.588e-30 Identity = 76/147 (51.70%), Postives = 101/147 (68.71%), Query Frame = 0 Query: 172 FDAEDEDEDEDEGEEGAEGGAERGESRPRNDPEWQFFDTAKVFVKGGDGGDGCVAFRREKYVDMGGPNGGSGGGGGSIYFRCDEGLNTLSGLRQKVHWKAGGGARGQGKSRTGATAPDVVVDVPPGTIVRTQDGTLAGQLVEHGERV 318 F+ +D DE EG + + RG +NDPEWQFFDTAK+ VK GDGG+GC +FRREKYV +GGP+GG+GG GGS+ D +NTL R++VHWKA G G K++ G + D+VV VPPGT+VR ++G LAG+L G+R+ Sbjct: 187 FNQQDRDE---EGTLQSHPDSRRGL---KNDPEWQFFDTAKINVKAGDGGNGCCSFRREKYVPLGGPDGGTGGRGGSVVLEADPNINTLYRFRRQVHWKAQSGGHGGSKNKMGESGSDLVVIVPPGTVVRDEEGRLAGELRRQGDRL 327
BLAST of EWM21738.1 vs. NCBI_GenBank
Match: gi|1210516004|dbj|GAX25089.1| (GTPase [Fistulifera solaris]) HSP 1 Score: 121.324 bits (303), Expect = 5.932e-27 Identity = 71/123 (57.72%), Postives = 87/123 (70.73%), Query Frame = 0 Query: 197 SRPRNDPEWQFFDTAKVFVKGGDGGDGCVAFRREKYVDMGGPNGGSGGGGGSIYFRCDEGLNTLSGLRQKVHWKAGGGARGQGKSRTGATAPDVVVDVPPGTIVR-TQDGTLAGQLVEHGERV 318 S +DPEW+FFDTA++ V GGDGG+G VAFRREK +GGP+GG GG GGS+Y CDE LNTL LRQK+H +A G G GK++ G A D +V VPPGT+VR LAG+L HGER+ Sbjct: 55 SSNNDDPEWKFFDTARLHVSGGDGGNGSVAFRREKGAPLGGPSGGRGGSGGSVYLECDESLNTLMMLRQKIHVRAANGKNGIGKNKDGQCADDTIVRVPPGTVVRELTTQKLAGELRTHGERL 177
BLAST of EWM21738.1 vs. NCBI_GenBank
Match: gi|219114306|ref|XP_002176324.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217402727|gb|EEC42716.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 117.472 bits (293), Expect = 1.091e-25 Identity = 75/152 (49.34%), Postives = 99/152 (65.13%), Query Frame = 0 Query: 168 AYDAFDAEDEDEDEDEGEEGAEGGAERGESRPRNDPEWQFFDTAKVFVKGGDGGDGCVAFRREKYVDMGGPNGGSGGGGGSIYFRCDEGLNTLSGLRQKVHWKAGGGARGQGKSRTGATAPDVVVDVPPGTIVR-TQDGTLAGQLVEHGERV 318 A + FDA+ E E + + + ++DPEW+FFDTA++ V+ GDGG GCVAFRREK GGPNGG GG GGS+Y D GLNTL LRQKVH KA G GQGK+R G +A ++ + VPPGT+VR + +AG+L E G+++ Sbjct: 2 ATEVFDADKEQETKKNQSRRIQSL----QKTEKDDPEWKFFDTARIHVQAGDGGTGCVAFRREKGEARGGPNGGRGGRGGSLYLIADPGLNTLMPLRQKVHVKARQGRNGQGKNRDGTSADNIYIRVPPGTVVRDLKTQKVAGELREAGQKL 149
BLAST of EWM21738.1 vs. NCBI_GenBank
Match: gi|516755746|ref|WP_018085757.1| (GTPase ObgE [Desulfurispora thermophila]) HSP 1 Score: 110.923 bits (276), Expect = 9.153e-24 Identity = 65/114 (57.02%), Postives = 81/114 (71.05%), Query Frame = 0 Query: 206 QFFDTAKVFVKGGDGGDGCVAFRREKYVDMGGPNGGSGGGGGSIYFRCDEGLNTLSGLRQKVHWKAGGGARGQGKSRTGATAPDVVVDVPPGTIVR-TQDGTLAGQLVEHGERV 318 F+D AK++VKGGDGG+GCVAFRREKYV GGP GG GG GGS+ + DEGL TL R + H+KAG G G GK+ G A D+V+ VP GT+VR + G + G LVEHG+R+ Sbjct: 1 MFYDYAKIYVKGGDGGNGCVAFRREKYVPDGGPWGGDGGRGGSVILQADEGLRTLVDFRYQRHYKAGRGQHGMGKNMHGRGAEDLVLRVPVGTVVRDAESGAVLGDLVEHGQRL 114
BLAST of EWM21738.1 vs. NCBI_GenBank
Match: gi|1054905972|ref|WP_066666756.1| (GTPase ObgE [Desulfotomaculum copahuensis] >gi|1034289358|gb|OAT85617.1| GTPase ObgE [Desulfotomaculum copahuensis]) HSP 1 Score: 109.768 bits (273), Expect = 2.188e-23 Identity = 66/114 (57.89%), Postives = 79/114 (69.30%), Query Frame = 0 Query: 206 QFFDTAKVFVKGGDGGDGCVAFRREKYVDMGGPNGGSGGGGGSIYFRCDEGLNTLSGLRQKVHWKAGGGARGQGKSRTGATAPDVVVDVPPGTIVR-TQDGTLAGQLVEHGERV 318 F+D AKVFVKGGDGG+GCVAFRREKYV GGP+GG GG GG + FR D GL TL R + H+KAG G G GK+ G + D+VV VPPGT+VR T +G L L G++V Sbjct: 1 MFYDQAKVFVKGGDGGNGCVAFRREKYVPEGGPSGGDGGAGGDVVFRVDPGLRTLVDFRYQRHFKAGRGQHGMGKNMHGKSGADLVVRVPPGTVVRDTSNGALIADLTREGQQV 114
BLAST of EWM21738.1 vs. NCBI_GenBank
Match: gi|955293614|ref|WP_058094543.1| (GTPase CgtA [Alicyclobacillus tengchongensis] >gi|954103604|gb|KRW91996.1| GTPase ObgE [Alicyclobacillus tengchongensis]) HSP 1 Score: 108.612 bits (270), Expect = 5.610e-23 Identity = 63/114 (55.26%), Postives = 81/114 (71.05%), Query Frame = 0 Query: 206 QFFDTAKVFVKGGDGGDGCVAFRREKYVDMGGPNGGSGGGGGSIYFRCDEGLNTLSGLRQKVHWKAGGGARGQGKSRTGATAPDVVVDVPPGTIVRTQD-GTLAGQLVEHGERV 318 FFD AK++VKGGDGG+G V++RREKYV +GGP GG GG GG + F DEGL TL R + H+KA G +G K++ GA APD+V+ VPPGT+VR D G G L +HG+R+ Sbjct: 1 MFFDHAKIYVKGGDGGNGIVSYRREKYVPLGGPAGGDGGRGGDVVFIVDEGLRTLIDFRYQRHFKAKPGEQGGTKNKHGADAPDMVIKVPPGTVVRDADSGQFLGDLTQHGDRL 114
BLAST of EWM21738.1 vs. NCBI_GenBank
Match: gi|493491995|ref|WP_006446680.1| (GTPase ObgE [Alicyclobacillus hesperidum] >gi|403121672|gb|EJY55949.1| GTP-binding protein Obg/CgtA [Alicyclobacillus hesperidum URH17-3-68] >gi|1088780449|emb|SDW39671.1| GTP-binding protein [Alicyclobacillus hesperidum]) HSP 1 Score: 108.612 bits (270), Expect = 5.894e-23 Identity = 63/114 (55.26%), Postives = 81/114 (71.05%), Query Frame = 0 Query: 206 QFFDTAKVFVKGGDGGDGCVAFRREKYVDMGGPNGGSGGGGGSIYFRCDEGLNTLSGLRQKVHWKAGGGARGQGKSRTGATAPDVVVDVPPGTIVRTQD-GTLAGQLVEHGERV 318 FFD AK++VKGGDGG+G V++RREKYV +GGP GG GG GG + F DEGL TL R + H+KA G +G K++ GA APD+V+ VPPGT+VR D G G L +HG+R+ Sbjct: 1 MFFDHAKIYVKGGDGGNGIVSYRREKYVPLGGPAGGDGGRGGDVVFVVDEGLRTLIDFRYQRHFKAKPGEQGGTKNKHGADAPDMVIKVPPGTVVRDADSGQFLGDLTQHGDRL 114 The following BLAST results are available for this feature:
BLAST of EWM21738.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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