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Properties
| Property Name | Value |
|---|
| Product | serine palmitoyltransferase |
| Orig transcript id | gnl|cribi|Naga_100065g6.7378.mrna |
| Orig protein id | gnl|cribi|Naga_100065g6.7378 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037250.1 | supercontig | KK037250.1:465390..468115 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8914 ID=rna8914|Name=rna8914|organism=Nannochloropsis gaditana|type=mRNA|length=591bp
ATGAAAATGGTGCGACTACTGGCAGTGCTGGTCGTTGCGGGCACGGCGTG
CGTCTCTGCCTTTATGCCCGTACTACCAGCGACACGCGTGCTGCAACAGC
AAGCGCGACCGCTAGTGGCTCCGTTGGAGATGGCCAAGCACCCCCAGTTC
AAGATTATCAAGAAAAAGATGCACAAGCGCCCGAAAAAGAGCAACGCATC
AGATCGCAATCGCGGAGGGCATTCGACCCACCCCGTGGACCAACGGGACA
TGAGCGGGCCGGGCTGGCTCTTCCCCGACCAGGAGGGGTGGGTGCCGTAC
GACGAGAGCGTGCACGGCCCCTTGGACGAGGAGATGAAGGAGCTGACGGA
GGGCTTGGACCCGATTTGGGTCCGAATTGTGGACCCGACCACCGGGGAGC
CCAAGTTGGAGGACGCGGCAAGGCGTTGCGGGGGAGGACGGGGAAAGGAT
CATCCGCTGGAGATATTTCTGTGTGCGCACGTGCACGTGGATGGTCCTGG
GTATGACACCAGGGAGGGGGCAGGCACACAGGGCGACCTTGTGAGTGCGG
GAGATGGAGTTGAAGGCACTGACGAAACGCAGAAAGAATAA back to topprotein sequence of rna8914 >rna8914-protein ID=rna8914-protein|Name=rna8914|organism=Nannochloropsis gaditana|type=polypeptide|length=648bp
MEQKNRLKKKRILHFGDLSLSESSGVRWVISHGSIMAFPGSPPQTSGEEA
TTTSSPAATTAMTNGKARRSLSTSGRTSRAAATPTSRSNPFAKLRRLSSR
KSTTTSAADARSTGPSSAPASSSSSHFFPPVTSQPAQTGPPAPVKIDRPF
STVAGLRDMPKSYERGHEVPITWFAAITTYFGYAVLILFGHIRDFFGRLF
GMSRYLATSPPPGYAPLLKDWENFYTRRLYHRIRDCWERPVCSAPGGRIT
VVERDSPDGNKTMLMTKRTRECLNLGSYNYLGFADDWQTSCKSHVMPTLD
NFNSCLCSARMDLGTSREHVRLEELVARYVGKEAALVYNMGFGTNSTTIP
ALVGRGSLIISDTMNHSSIVAGSRASGALVRTFVHNDAASLERVLRDAIA
RGMPRTHRPWRKILVMVEGIYSMEGEICNLKGIVEVVKRYGVYLYVDEAH
SIGALGETGRGICEYAGVDPADVDILMGTFTKSFGGMGGYIAGDKALIQY
LRRASAGSVYHNSLSTLVCSQVYRALRVIMGEDGTDTGRRKIAALRNNSN
HMRRELIKMGCHVYGDYDSPIIPVMLYNPTKIAAFSREAFMRGLAVVVVG
FPATPIVLSRTRICVSAGHTRKEIERALEVIEELVDLLRLRYANNVMG back to topmRNA from alignment at KK037250.1:465390..468115- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8914 ID=rna8914|Name=rna8914|organism=Nannochloropsis gaditana|type=mRNA|length=2726bp|location=Sequence derived from alignment at KK037250.1:465390..468115- (Nannochloropsis gaditana)
ATGGAACAGAAAAATAGGCTAAAGAAAAAAAGAATTTTGTGACTGCCCAT
TGCGATCTTAGGTAAATTATTTACGTGTCTTTTGTCGTTTATTTTGCCGG
GGGGGAATGTAGATAGGGGATCGCTCGCTCAAGAACGCACTACGCGGAGG
GCGACACACCGGCCTTATCCCGCCAAGCTTTGAAGCCCTCACTTCCTACT
TTGAATACATTTCGCTTCGCACGTATACAGACATTTTGGAGACCTCAGCC
TTAGTGAGTCGTCGGGGGTGCGGTGGGTGATCAGTCACGGCAGCATCATG
GTAAGAAGAGCGCGCATCATTGCCTCGAGGCGGCAAACAAACAGGCAATG
TGCTGGAGGGGGAAGTGAAATCGAGAAAGGCCAGAAGGGACAGCATTGAA
GTAGAAATAATATCATAACGACATTAACTGGTAATGTATGAATCCCTGTT
CCCTCCAGGCCTTTCCAGGGAGCCCGCCTCAGACAAGTGGAGAGGAGGCC
ACCACTACCTCCTCTCCCGCAGCTACGACAGCAATGACCAACGGCAAAGC
ACGCCGAAGTTTGTCCACTTCTGGGCGTACTTCCAGGGCAGCCGCTACAC
CTACCAGCAGGAGCAATCCCTTTGCCAAATTGCGGCGTCTGTCATCCAGA
AAATCCACCACCACCTCAGCCGCTGATGCACGAAGCACCGGCCCCTCCTC
GGCGCCGGCCTCCTCATCCTCCTCTCACTTCTTCCCACCTGTGACATCGC
AACCTGCGCAGACTGGACCCCCTGCTCCAGTCAAAATAGACCGGCCCTTT
TCCACCGTGGCAGGGCTGCGAGACATGCCCAAGTCTTACGAACGGGGCCA
CGAGGTCCCCATTACCTGGTTCGCTGCCATCACCACCTATTTTGGCTATG
CGGTCCTGATCTTGTTCGGACACATCCGGGATTTCTTCGGGCGTTTGTTT
GGGATGTCTAGGTACTTGGCCACTTCACCCCCCCCCGGGTACGCGCCCCT
GCTCAAGGACTGGGAAAACTTCTACACTCGCCGCCTATACCACCGGATCC
GTGACTGCTGGGAGCGCCCTGTGTGCAGCGCGCCGGGAGGGAGGATCACG
GTGGTGGAGCGGGATTCCCCGGACGGGAACAAGACGATGCTCATGACCAA
GCGCACGCGGGAGTGCCTGAACCTGGGGTCGTACAATTACTTGGGCTTCG
CGGACGACTGGCAGACCTCCTGCAAGTCCCACGTCATGCCCACCCTGGAC
AACTTCAACAGCTGTCTGTGCTCGGCGCGCATGGACCTGGGTACGTCCAG
GGAGCACGTCCGCTTGGAGGAGCTCGTGGCTCGCTATGTGGGGAAGGAGG
CGGCCTTGGTCTACAACATGGGCTTCGGGACCAACTCCACCACCATCCCA
GCCCTGGTGGGCCGGGGGAGCTTGATCATCAGCGACACCATGAACCATTC
CTCCATTGTGGCCGGATCCCGGGCCTCAGGGGCTTTGGTCCGCACCTTTG
TGCACAACGACGCGGCCTCCTTGGAACGGGTCCTGAGGGACGCGATTGCC
CGAGGCATGCCTCGGACCCACCGGCCCTGGCGGAAGATCCTGGTGATGGT
GGAAGGGATCTACAGCATGGAGGGGGAGATCTGCAACCTGAAGGGCATCG
TGGAGGTGGTGAAACGCTACGGGGTCTACCTGTACGTGGACGAGGCGCAT
TCCATCGGGGCCCTGGGTGAGACCGGGCGGGGCATCTGCGAGTACGCGGG
GGTGGACCCGGCCGACGTGGACATCCTGATGGGCACCTTCACCAAGAGCT
TCGGCGGCATGGGCGGGTATATTGCGGGGGACAAGGCCCTTATCCAGTAC
CTGCGGCGGGCCAGCGCCGGGAGCGTCTACCACAACTCGCTTTCCACCCT
GGTGTGCAGCCAGGTTTATCGCGCCCTTCGCGTGATCATGGGCGAGGACG
GCACGGACACGGGCCGGCGGAAGATTGCGGCGCTCAGGAACAATTCCAAC
CACATGCGGCGGGAGCTGATCAAGATGGGGTGCCACGTCTATGGGGACTA
CGACTCGCCCATCATCCCGGTGATGCTTTACAACCCCACCAAGATCGCGG
CCTTCTCCCGTGAGGCCTTTATGCGGGGCCTGGCCGTCGTGGTGGTGGGG
TTTCCGGCGACGCCCATCGTGTTGTCACGGACCAGGATATGCGTGAGCGC
GGGGCATACCCGGAAGGAGATCGAGCGGGCCTTGGAGGTGATCGAGGAGC
TGGTGGACCTGCTGCGCTTGCGGTACGCGAATAACGTGATGGGATGAGGG
GAGAAGCGAGGAAGGAAGAAGGGAGATAAATTGGACGAGAAAAAAGACAG
CGCGAGCGCGCTGAAATGCGAGCAGGGTAGGAAGGAAGGAGGGAGGAAGG
AGGGCAAGGTAGTTTGCACTGTATTTATTGCAGGGTATGTGACAATGTGG
CCTGCGTCGTGTCAATTAGAAGGCCCGCAGCAAGTGGGATTCGATCGAAG
AAAGCGTCGAAGCACGCGGTGGGACAAAAAAGAGAGAAAGAAGAGCATGC
AGTGCTGGCAAGAGGCGAGCCTGGTGGGCGCTATGCCTCGCAAAGGGATC
GGATCGAAAGCAAACCAACCCCCTCAAGAGGAAACCACGGCTGGAAGGAA
GGGAAGCAGAGACACGGGGTAACGACACCTCTGATTGCTTGCTCGCCCAT
TAAAAGCTTCATTGACTTCGCGGTAC back to topCoding sequence (CDS) from alignment at KK037250.1:465390..468115- >rna8914 ID=rna8914|Name=rna8914|organism=Nannochloropsis gaditana|type=CDS|length=5841bp|location=Sequence derived from alignment at KK037250.1:465390..468115- (Nannochloropsis gaditana)
GCCTTTCCAGGGAGCCCGCCTCAGACAAGTGGAGAGGAGGCCACCACTAC
CTCCTCTCCCGCAGCTACGACAGCAATGACCAACGGCAAAGCACGCCGAA
GTTTGTCCACTTCTGGGCGTACTTCCAGGGCAGCCGCTACACCTACCAGC
AGGAGCAATCCCTTTGCCAAATTGCGGCGTCTGTCATCCAGAAAATCCAC
CACCACCTCAGCCGCTGATGCACGAAGCACCGGCCCCTCCTCGGCGCCGG
CCTCCTCATCCTCCTCTCACTTCTTCCCACCTGTGACATCGCAACCTGCG
CAGACTGGACCCCCTGCTCCAGTCAAAATAGACCGGCCCTTTTCCACCGT
GGCAGGGCTGCGAGACATGCCCAAGTCTTACGAACGGGGCCACGAGGTCC
CCATTACCTGGTTCGCTGCCATCACCACCTATTTTGGCTATGCGGTCCTG
ATCTTGTTCGGACACATCCGGGATTTCTTCGGGCGTTTGTTTGGGATGTC
TAGGTACTTGGCCACTTCACCCCCCCCCGGGTACGCGCCCCTGCTCAAGG
ACTGGGAAAACTTCTACACTCGCCGCCTATACCACCGGATCCGTGACTGC
TGGGAGCGCCCTGTGTGCAGCGCGCCGGGAGGGAGGATCACGGTGGTGGA
GCGGGATTCCCCGGACGGGAACAAGACGATGCTCATGACCAAGCGCACGC
GGGAGTGCCTGAACCTGGGGTCGTACAATTACTTGGGCTTCGCGGACGAC
TGGCAGACCTCCTGCAAGTCCCACGTCATGCCCACCCTGGACAACTTCAA
CAGCTGTCTGTGCTCGGCGCGCATGGACCTGGGTACGTCCAGGGAGCACG
TCCGCTTGGAGGAGCTCGTGGCTCGCTATGTGGGGAAGGAGGCGGCCTTG
GTCTACAACATGGGCTTCGGGACCAACTCCACCACCATCCCAGCCCTGGT
GGGCCGGGGGAGCTTGATCATCAGCGACACCATGAACCATTCCTCCATTG
TGGCCGGATCCCGGGCCTCAGGGGCTTTGGTCCGCACCTTTGTGCACAAC
GACGCGGCCTCCTTGGAACGGGTCCTGAGGGACGCGATTGCCCGAGGCAT
GCCTCGGACCCACCGGCCCTGGCGGAAGATCCTGGTGATGGTGGAAGGGA
TCTACAGCATGGAGGGGGAGATCTGCAACCTGAAGGGCATCGTGGAGGTG
GTGAAACGCTACGGGGTCTACCTGTACGTGGACGAGGCGCATTCCATCGG
GGCCCTGGGTGAGACCGGGCGGGGCATCTGCGAGTACGCGGGGGTGGACC
CGGCCGACGTGGACATCCTGATGGGCACCTTCACCAAGAGCTTCGGCGGC
ATGGGCGGGTATATTGCGGGGGACAAGGCCCTTATCCAGTACCTGCGGCG
GGCCAGCGCCGGGAGCGTCTACCACAACTCGCTTTCCACCCTGGTGTGCA
GCCAGGTTTATCGCGCCCTTCGCGTGATCATGGGCGAGGACGGCACGGAC
ACGGGCCGGCGGAAGATTGCGGCGCTCAGGAACAATTCCAACCACATGCG
GCGGGAGCTGATCAAGATGGGGTGCCACGTCTATGGGGACTACGACTCGC
CCATCATCCCGGTGATGCTTTACAACCCCACCAAGATCGCGGCCTTCTCC
CGTGAGGCCTTTATGCGGGGCCTGGCCGTCGTGGTGGTGGGGTTTCCGGC
GACGCCCATCGTGTTGTCACGGACCAGGATATGCGTGAGCGCGGGGCATA
CCCGGAAGGAGATCGAGCGGGCCTTGGAGGTGATCGAGGAGCTGGTGGAC
CTGCTGCGCTTGCGGTACGCGAATAACGTGATGGGATGAACATTTTGGAG
ACCTCAGCCTTAGTGAGTCGTCGGGGGTGCGGTGGGTGATCAGTCACGGC
AGCATCATGATGGAACAGAAAAATAGGCTAAAGAAAAAAAGAATTTTGCC
TTTCCAGGGAGCCCGCCTCAGACAAGTGGAGAGGAGGCCACCACTACCTC
CTCTCCCGCAGCTACGACAGCAATGACCAACGGCAAAGCACGCCGAAGTT
TGTCCACTTCTGGGCGTACTTCCAGGGCAGCCGCTACACCTACCAGCAGG
AGCAATCCCTTTGCCAAATTGCGGCGTCTGTCATCCAGAAAATCCACCAC
CACCTCAGCCGCTGATGCACGAAGCACCGGCCCCTCCTCGGCGCCGGCCT
CCTCATCCTCCTCTCACTTCTTCCCACCTGTGACATCGCAACCTGCGCAG
ACTGGACCCCCTGCTCCAGTCAAAATAGACCGGCCCTTTTCCACCGTGGC
AGGGCTGCGAGACATGCCCAAGTCTTACGAACGGGGCCACGAGGTCCCCA
TTACCTGGTTCGCTGCCATCACCACCTATTTTGGCTATGCGGTCCTGATC
TTGTTCGGACACATCCGGGATTTCTTCGGGCGTTTGTTTGGGATGTCTAG
GTACTTGGCCACTTCACCCCCCCCCGGGTACGCGCCCCTGCTCAAGGACT
GGGAAAACTTCTACACTCGCCGCCTATACCACCGGATCCGTGACTGCTGG
GAGCGCCCTGTGTGCAGCGCGCCGGGAGGGAGGATCACGGTGGTGGAGCG
GGATTCCCCGGACGGGAACAAGACGATGCTCATGACCAAGCGCACGCGGG
AGTGCCTGAACCTGGGGTCGTACAATTACTTGGGCTTCGCGGACGACTGG
CAGACCTCCTGCAAGTCCCACGTCATGCCCACCCTGGACAACTTCAACAG
CTGTCTGTGCTCGGCGCGCATGGACCTGGGTACGTCCAGGGAGCACGTCC
GCTTGGAGGAGCTCGTGGCTCGCTATGTGGGGAAGGAGGCGGCCTTGGTC
TACAACATGGGCTTCGGGACCAACTCCACCACCATCCCAGCCCTGGTGGG
CCGGGGGAGCTTGATCATCAGCGACACCATGAACCATTCCTCCATTGTGG
CCGGATCCCGGGCCTCAGGGGCTTTGGTCCGCACCTTTGTGCACAACGAC
GCGGCCTCCTTGGAACGGGTCCTGAGGGACGCGATTGCCCGAGGCATGCC
TCGGACCCACCGGCCCTGGCGGAAGATCCTGGTGATGGTGGAAGGGATCT
ACAGCATGGAGGGGGAGATCTGCAACCTGAAGGGCATCGTGGAGGTGGTG
AAACGCTACGGGGTCTACCTGTACGTGGACGAGGCGCATTCCATCGGGGC
CCTGGGTGAGACCGGGCGGGGCATCTGCGAGTACGCGGGGGTGGACCCGG
CCGACGTGGACATCCTGATGGGCACCTTCACCAAGAGCTTCGGCGGCATG
GGCGGGTATATTGCGGGGGACAAGGCCCTTATCCAGTACCTGCGGCGGGC
CAGCGCCGGGAGCGTCTACCACAACTCGCTTTCCACCCTGGTGTGCAGCC
AGGTTTATCGCGCCCTTCGCGTGATCATGGGCGAGGACGGCACGGACACG
GGCCGGCGGAAGATTGCGGCGCTCAGGAACAATTCCAACCACATGCGGCG
GGAGCTGATCAAGATGGGGTGCCACGTCTATGGGGACTACGACTCGCCCA
TCATCCCGGTGATGCTTTACAACCCCACCAAGATCGCGGCCTTCTCCCGT
GAGGCCTTTATGCGGGGCCTGGCCGTCGTGGTGGTGGGGTTTCCGGCGAC
GCCCATCGTGTTGTCACGGACCAGGATATGCGTGAGCGCGGGGCATACCC
GGAAGGAGATCGAGCGGGCCTTGGAGGTGATCGAGGAGCTGGTGGACCTG
CTGCGCTTGCGGTACGCGAATAACGTGATGGGATGAACATTTTGGAGACC
TCAGCCTTAGTGAGTCGTCGGGGGTGCGGTGGGTGATCAGTCACGGCAGC
ATCATGATGGAACAGAAAAATAGGCTAAAGAAAAAAAGAATTTTGCCTTT
CCAGGGAGCCCGCCTCAGACAAGTGGAGAGGAGGCCACCACTACCTCCTC
TCCCGCAGCTACGACAGCAATGACCAACGGCAAAGCACGCCGAAGTTTGT
CCACTTCTGGGCGTACTTCCAGGGCAGCCGCTACACCTACCAGCAGGAGC
AATCCCTTTGCCAAATTGCGGCGTCTGTCATCCAGAAAATCCACCACCAC
CTCAGCCGCTGATGCACGAAGCACCGGCCCCTCCTCGGCGCCGGCCTCCT
CATCCTCCTCTCACTTCTTCCCACCTGTGACATCGCAACCTGCGCAGACT
GGACCCCCTGCTCCAGTCAAAATAGACCGGCCCTTTTCCACCGTGGCAGG
GCTGCGAGACATGCCCAAGTCTTACGAACGGGGCCACGAGGTCCCCATTA
CCTGGTTCGCTGCCATCACCACCTATTTTGGCTATGCGGTCCTGATCTTG
TTCGGACACATCCGGGATTTCTTCGGGCGTTTGTTTGGGATGTCTAGGTA
CTTGGCCACTTCACCCCCCCCCGGGTACGCGCCCCTGCTCAAGGACTGGG
AAAACTTCTACACTCGCCGCCTATACCACCGGATCCGTGACTGCTGGGAG
CGCCCTGTGTGCAGCGCGCCGGGAGGGAGGATCACGGTGGTGGAGCGGGA
TTCCCCGGACGGGAACAAGACGATGCTCATGACCAAGCGCACGCGGGAGT
GCCTGAACCTGGGGTCGTACAATTACTTGGGCTTCGCGGACGACTGGCAG
ACCTCCTGCAAGTCCCACGTCATGCCCACCCTGGACAACTTCAACAGCTG
TCTGTGCTCGGCGCGCATGGACCTGGGTACGTCCAGGGAGCACGTCCGCT
TGGAGGAGCTCGTGGCTCGCTATGTGGGGAAGGAGGCGGCCTTGGTCTAC
AACATGGGCTTCGGGACCAACTCCACCACCATCCCAGCCCTGGTGGGCCG
GGGGAGCTTGATCATCAGCGACACCATGAACCATTCCTCCATTGTGGCCG
GATCCCGGGCCTCAGGGGCTTTGGTCCGCACCTTTGTGCACAACGACGCG
GCCTCCTTGGAACGGGTCCTGAGGGACGCGATTGCCCGAGGCATGCCTCG
GACCCACCGGCCCTGGCGGAAGATCCTGGTGATGGTGGAAGGGATCTACA
GCATGGAGGGGGAGATCTGCAACCTGAAGGGCATCGTGGAGGTGGTGAAA
CGCTACGGGGTCTACCTGTACGTGGACGAGGCGCATTCCATCGGGGCCCT
GGGTGAGACCGGGCGGGGCATCTGCGAGTACGCGGGGGTGGACCCGGCCG
ACGTGGACATCCTGATGGGCACCTTCACCAAGAGCTTCGGCGGCATGGGC
GGGTATATTGCGGGGGACAAGGCCCTTATCCAGTACCTGCGGCGGGCCAG
CGCCGGGAGCGTCTACCACAACTCGCTTTCCACCCTGGTGTGCAGCCAGG
TTTATCGCGCCCTTCGCGTGATCATGGGCGAGGACGGCACGGACACGGGC
CGGCGGAAGATTGCGGCGCTCAGGAACAATTCCAACCACATGCGGCGGGA
GCTGATCAAGATGGGGTGCCACGTCTATGGGGACTACGACTCGCCCATCA
TCCCGGTGATGCTTTACAACCCCACCAAGATCGCGGCCTTCTCCCGTGAG
GCCTTTATGCGGGGCCTGGCCGTCGTGGTGGTGGGGTTTCCGGCGACGCC
CATCGTGTTGTCACGGACCAGGATATGCGTGAGCGCGGGGCATACCCGGA
AGGAGATCGAGCGGGCCTTGGAGGTGATCGAGGAGCTGGTGGACCTGCTG
CGCTTGCGGTACGCGAATAACGTGATGGGATGAACATTTTGGAGACCTCA
GCCTTAGTGAGTCGTCGGGGGTGCGGTGGGTGATCAGTCACGGCAGCATC
ATGATGGAACAGAAAAATAGGCTAAAGAAAAAAAGAATTTT back to top
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