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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100399g3.1192.mrna |
Orig protein id | gnl|cribi|Naga_100399g3.1192 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KK037250.1 | supercontig | KK037250.1:404292..405685 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8891 ID=rna8891|Name=rna8891|organism=Nannochloropsis gaditana|type=mRNA|length=2716bp AGGGACATCGAGCTGGAAAGGAGCGAGCTGCAATTACCAAAAATCAGGAG TCTCGTGCTCCTTGGTACCTGACTGTACCGCAAAAGTGGCCTAGATAAGA ACATTTGTGAAGAGAATGGGCTTTTCAAGACGGTCTCTGTGACAAGTGCC ACTCGTGATTTATTTTGCGGGTGTCTTGCTAGGGATCGCTTGACACTCAT GAATTCAGAGGGCTTGTACTGAAGTTTAGCTATGAAATGACATCATATTC GGGCGTTGTCACTATGAAATTATGTCACAAGAAATCATGACATGTTTTGA AAAAGTGCCACGAGAAAACAAAATGCTCCGCAGTAGTAGTAAAAAGTTGC CACATATACCCAAACACAATTTGTAAGACTGGGCTGCCATCCTCCTCGAA CGTTGTGACTAATGATGCACTAGCACACAATTACATCTCCTTTCCGCACA ATTAATACTTATAGCTTTCTGCTATTTGCTATGCCTTACGCTTTACAAAA TCAGAGACGTCTCTGCACGTTTTTTATCAGCTTTCTTACATTTCTACCTC ATAGCTGGTGAAAATAGTTGAACATTTCAACTCCTTCCGATTGCCTTTCC TTCGTCTCCCACTGTCTCACGGGCATTACTAGTAGGATTTTCCTAGTGAT ATCACAAAATTCTCCGACGTGTTTACCACAATCAGGACATGGGGAAAAGC GTCCTCACGTGAGATTCCCCGTATCAACCATACAACGTTGAAAGCTGCGA GACCTTATGAATTTCTGGAGCAGTCACATACACTAAATTGCACATGTAAA GCCTTTTTTTTTCGCGCATTTCAATAGCCGCGAGGAATGTAGTTTAGAAT GAAAAACATCCAAACATGTTTTCAGCGTCTCACTTCCCCTTGCCCGTCTG TCTCGCCTACGAAACCAGCGAAGGCTCATGTTCCACGCTTGAAAACCGTG CCGCTCACGCACTGCGGGCCACCACGGACATTTTAGAACAACTTCCCTCC TTCCTCTTTTTCTGACCAGGGATCAATGACGGACGGCAGCAGCAATGGCA CTGCCGGTGAAAGTGTCAGCGCTGTACTGCCACTCCGGCGACGTGTGCCA CCCGCAGCTCGACGCCGTCACGACCGTCGTAGACCTCTGCCGTGGCGGCG GGGGCAAGCCGCCTTGTCGCAAAGCCTTACAACGTCAGACTCCTCCCTTA TTTTCCCCCTCTCCACGACGGGAGGAAGCCACTATGTCACTCTGGAGATC GGGACTCCACCGCAGGCGCAGGCAGTTATTGTCGACACGGGCAGTGCCTG GGTGGCATTTGGGTGTGCTCCTGGCTGTGACATGTACTGTGGCGAACATG TCCACCCATTCTTTGCGTATAATGAGAGCTCCAGCGCTCGAATCCTCAAA TGTGGGGAATGCAGCACCCAATGCTTGGATGATTTGTGCCTGGTCACGCA ACACTACTCCGAGGGCAGCGCGTGGCGGGCCTTCTCGGTGGAGGACAGCG TTGGTTTTCATACTGAGCCCGGCACGCGCCAGGCTCCAACAAATGTGCCT CCGACGACCGTTCCCTTTGTGTTCGGTTGCCAGACCAAACTCACTGGTCT TTTCGTTCCGCAGCTGGAAAACGGCATCATGGGTCTCTCTCGCGGCCCTG AGAACCTCGTCTCCCACATGCGGGCCGCCGGGCGCATCCCGCGGGCGGCT TTCTCCCTCTGTTTCCACGAGCATCCTAACGACGGGGGCTGGATGACCGT GGGCACTCTCGATGATGCGACCAGCAGCAGTCGTGCCTCGCGGGACCTGG GAGAGGGTGCGGCCCAGGATGGAGGAGACCAGGGGGGGGGCAATGGCCTA TGCCTCCCTGACGCCCTCCCCCACCGGCTGGTTCCTGGTCGAGCTTCGCG CCCTTTTCCTGGGGGGCCACATCCTCACAGAGTCGGACGCTCCCGTTTCT CCCGCTGACTCCCCCTCTACCCCGCCCACCCGGCGCCGGCATGCTCTTTT GGACTCGGGAACCACCGACACCTACATGCTGCGCTCACTCCGCCCCTCGT TCTCCTCCCAATTCTCCCGCGCCACCAGGGGGCGTCTCCCTTTCGTGCCC GGGGCGCCCTACCGGCTGTCCATGTACGAATTACTCCTGCTGCCCGCCTT GGAGGTGGATCTTGGCGAGGAGCAGGCGGGGGCCGAGAGGACGGGGGCCC GTCTGTCCATCCCGCCCATGTCCTATATGGAGGAGCAGAGGGAGGGCGAG AATGGGAATGGGGAGGAGCGGGAAAGTGAGACGGAGGGGCAGGGGCAGGT TGCGCGGACAGTGTGGGTGCCGCGCCTGTATTTCACAGAGGCCTCCCTGG CCATCCTGGGGTCGAACGCCCTCCGCGGTCAGGAGGTGCTCTTCGACATG GAGGGAGGGAGGGTGGGGGTCCGGTCCCTGCCCTCCTGCTCCCACCGGCG ACGGGCGGCCGCGTTGGCGTGCGAGGAGCAGTGTGGGAGGCTCTCTGCCT CCGCGTCTTCCCCCCCTGCCTCGCCTGTTTGTCGTCTGGATGGGGTCACG GACACGTCTGCCTGCCACGCCACCTGTGGTCTGGCCAGCGAATGGGAGGA AGCGACTGGCGGTCGCTCCTCCGGCGTCCGTCCCGGCGAGAGATTCGGAG CACCCAGTGAGGGAGTCAGCGACGAGGGAACTAGCGTCGATCCCTGGGGC TCGGACAGGGCGAGCG back to topprotein sequence of rna8891 >rna8891-protein ID=rna8891-protein|Name=rna8891|organism=Nannochloropsis gaditana|type=polypeptide|length=209bp MEAVRWACRDAEGTYIPLLRGLPHDFCARNQEGKYCLEAYMPLLSGCPSS VNCTASLSPLCGALQDTGCCFQHLLPRHPQAADLSFHCPRSQDTPPACPP PPDTLFGPGSLPLSAEPVTSLSSWGRSLTASEIVLLGSLSLLSLLLVAVV PRWARALASRGSLGAWYQHLLRTISRRPSVSSVGGDGVAGETDSLTKEIE RGTPRAQCV back to topmRNA from alignment at KK037250.1:404292..405685+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8891 ID=rna8891|Name=rna8891|organism=Nannochloropsis gaditana|type=mRNA|length=1394bp|location=Sequence derived from alignment at KK037250.1:404292..405685+ (Nannochloropsis gaditana) ggcgggcccTGCCCCCCACTGCAGCCTCCGCAGCGCACGCCcagggcaga
ggcggaggatagGAACCGTCTGGCCGCCGCCCAATGGAGGCAgtgtcgct
ccctcctcttctcgggTGCTCCTGGATGCGCCGATTTGGCGCTtgccctc
ctaccccctcccaAATTCCACGGCCCATCCACCCACGAGAGCGCGGAGAA
CTTCCCCTCGGGAGACCtgccttccccgtcccttcTGTGCAGCAATCCCT
GCATGGAAGCCGTACGATGGGCCTGTCGGGACGCCGAAGGCACCTACATT
CCGCTGCTGAGAGGTCTTCCCCACGACTTCTGCGCGCGAAaccaagaagg
aaaataTTGCTTGGAGGCATACATGCCCCTTCTGTCAGGGTGTCCCTCTT
CAGTAAACTgcactgcctccctttcccccctctgcgGGGCCCTCCAAGAC
ACGGGCTGTTGCTTCCAGCATCTATTGCCCCGCCATCCACAAGCTGCCGA
CCTCAGCTTCCATTGTCCTCGCTCCCAAGACACCCCCCCGGcctgtcccc
ctccgccggACACGCTCTTTGGACCGGGCAGCCTGCCTCTCTCGGCCGAG
CCCGtcacctctctttcctcctgggGCCGCAGTCTCACGGCGAGCGAGAT
CGTCCTTCTGGGTAGCCTgagcctcctctccctcctccttgtggcCGTTG
TGCCGAGATGGGCCCGCGCCCTGGCCTCGCGGGGTTCTCTTGGGGCGTGG
TACCAACACCTACTGCGAACAATCTCCAGGAGACCCTCGGTTTCCTCCGT
CGGAGGGGATGGCGTGGCGGGTGAAACTGATAGCCTCACCAAGGAGATAG
AGCGAGGCACTCCGAGAGCACAGTGTGTGTGATTACCTAAAGCACCTTGT
AAAGAAAATTTGTGATTTTAGGggttcttctcttttcttaTTTTTCTTCG
GAAATGATTGGCAAGCAATCAGTAAGTGCCGAGGGCGTCGTTACTTGAAA
CGCGCCAAATAAATTCGGTATGCGTTGGCACACAATTTTCAcgcaccgcc
ctccttctatTTCTCTGCATGCCGGTGAGGGCATTCCTTATTGAAGTATA
GAATGATGACATAAAGTGCTGCCCATTCTTTGTGTGAAAGATTATTGCTT
ATTGCCAATCAAGAAGTCTGCCTTTCTTTCGGCGCATGTCCTTGTCTGTT
GGTTCAGCCAAGGTTCTTGTGCTTTTTATGCAGATGTGTATGCCTCTATG
TTTACTAATCTGGCCTAAGCCCACCGTCTTACCACGCCTTTCACCATAGT
CATAGCATGACCTGGTCGTTGGGCTCCTATTTCCTAATGTTTTGATCTGA
CCGCAACGAAACATATCTGGAGTAATGTAATAAGTAATACACCG back to topCoding sequence (CDS) from alignment at KK037250.1:404292..405685+ >rna8891 ID=rna8891|Name=rna8891|organism=Nannochloropsis gaditana|type=CDS|length=630bp|location=Sequence derived from alignment at KK037250.1:404292..405685+ (Nannochloropsis gaditana) ATGGAAGCCGTACGATGGGCCTGTCGGGACGCCGAAGGCACCTACATTCC GCTGCTGAGAGGTCTTCCCCACGACTTCTGCGCGCGAAaccaagaaggaa aataTTGCTTGGAGGCATACATGCCCCTTCTGTCAGGGTGTCCCTCTTCA GTAAACTgcactgcctccctttcccccctctgcgGGGCCCTCCAAGACAC GGGCTGTTGCTTCCAGCATCTATTGCCCCGCCATCCACAAGCTGCCGACC TCAGCTTCCATTGTCCTCGCTCCCAAGACACCCCCCCGGcctgtccccct ccgccggACACGCTCTTTGGACCGGGCAGCCTGCCTCTCTCGGCCGAGCC CGtcacctctctttcctcctgggGCCGCAGTCTCACGGCGAGCGAGATCG TCCTTCTGGGTAGCCTgagcctcctctccctcctccttgtggcCGTTGTG CCGAGATGGGCCCGCGCCCTGGCCTCGCGGGGTTCTCTTGGGGCGTGGTA CCAACACCTACTGCGAACAATCTCCAGGAGACCCTCGGTTTCCTCCGTCG GAGGGGATGGCGTGGCGGGTGAAACTGATAGCCTCACCAAGGAGATAGAG CGAGGCACTCCGAGAGCACAGTGTGTGTGA back to top
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