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Properties
Property Name | Value |
Product | hcp beta-lactamase-like protein |
Orig transcript id | gnl|cribi|Naga_100231g4.10122.mrna |
Orig protein id | gnl|cribi|Naga_100231g4.10122 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KK037250.1 | supercontig | KK037250.1:227041..228623 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8812 ID=rna8812|Name=rna8812|organism=Nannochloropsis gaditana|type=mRNA|length=1440bp TGCCAGCATCCGCTCCTCATACTCGGGATCGATAGCTTGAAGCCCCTCGA TCATACTTGCCTCAATCTATCCAGGCCTAAGCAAAGTGTTCGTTGTGAGC CAGTACTATTATTCATGTGTGATGTCGTGTCATTCATGTCATTCATTCAG TCGCACCGGCGACTCTCACGAATCGATGCATGAGCTTCGCAACTTGCTAG TGTATACGTACCGTTCCAGACTTCTCTTTGGTCCCGTCTTGGAGATCGTT AATGATACAGAGGAATGCACGTCGCGAGTGGGGAGGTTGGTGAGTAGCTA GTGTATACGTACCGTTCCACACTTCTCTTTGGTCCCGTCTTGGAGATCCT TAAAGGTACAGAGGAATGCACGTCGCGAGTGGGGAGGTTGGTGAGTAGCA ATTCGTCGCACATGGAGACGAAGCACTGTCATCAGGATGGCTGTGTGACC TTCTAAGGAAGGATGTAAGGAAGCAGGCACGTACATCCCTGAGTCACATG GATGGGCAAGTGCCTCGCCCAATTTTGACGTTCTCTCTTCCTAGTCCCCT TGCAGAGGACAACCGCTTCCGCCTGGTTCGTTCCTTTTTCTTGCAGGTCG CACAACTCCTCTTCAATTTGATATCAGTTCACTCTCGATTCAGATCGCGT GGCTGAATGCCCCCGTTGCTTCCGACTTTGAGCAGAACCCTTATAAGTGC TGCCTGCTTGTGCTTTACCGCTCCATCCTCCTTTGTCCTCCGTCCTTCGT CAAGCCGCCCCGCCTCCACCGCCGTGGGAATGGCCGCTCAAGGTTTTTGC TATAAATATCCCCGACCGTCGGTCACGGTTGACACTCTTGTCTTCTGTTT GGATGAAACCCAGATGAAGATTTTGCTCGTTCAGCGCGGGAACGAGCCCT TCAAAGGGGCTTGGGCTCTGCCGGGGGGGTTTGTCGATCAGGACGAGGGG CTGGACTCCGCGGCGGCTCGGGAGCTCAGGGAAGAAACTGCTCTAGATAG TATCTCGTTTGCACAGGTCGGTACTTATGGACAGCCAGGGCGAGACCCGC GGGGACACACCATCACTGTGGCCTACACAGCATTCCTGCTGTCGTCTGAG GGAGCAAGAGCTGGGGATGACGCCCGAGAGGCAAAGTTTTTCGCGTTCGG CTCACTTCCTCCCCTAGCTTTCGACCACAAGAAAATCATTGAGGAGACGT GGATGAGATTGGTCGTGTGTGACAAGGAGGGTACGACCGTGGTGAAGGAG CGAGGAGCACAGCAAGTGCTGTGTAGGTTGCCAACAGCCAGCGCGGCACA AGTCGTCAGATCTTCGAAGCCTTTCACATAAAATGAGGAAGAAATTGATA CTCGACATCCGTATTAGTAGACTGCTTAATCTGTCGTTATTTTACACCAG GAGCGTTTTGGCCTATTTTTATGTGCCGCCCGGGCACTCA back to topprotein sequence of rna8812 >rna8812-protein ID=rna8812-protein|Name=rna8812|organism=Nannochloropsis gaditana|type=polypeptide|length=227bp MIEGLQAIDPEYEERMLAFEMDCDKGKGDAWACHSVGEFLAVVKGDYNKA AKVYTDNCAKYSHPPSCFNLGRLYLGGRGVPQSDTRSLKCFDTSCKAGHG MACHHMGLLLLYGKDGGYDVSKDVKKATGILNKACGEGIPDSCYALASHL LRHLPEDKSHERDALKAKGLLEQGCARGHGPSCFNLAVMHKKGDTGIPRN EQEFEKYKKVTEDLVEQTGALTWKKGH back to topmRNA from alignment at KK037250.1:227041..228623+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8812 ID=rna8812|Name=rna8812|organism=Nannochloropsis gaditana|type=mRNA|length=1583bp|location=Sequence derived from alignment at KK037250.1:227041..228623+ (Nannochloropsis gaditana) AGCCACGCGATCTGAATCGAGAGTGAACTGATATCAAATTGAAGAGGAGT
TGTGCGACctgcaagaaaaaggaacGAACCAGGCGGAAGCGGTTGTCCTC
TGCAAGGGGACTAGGAAGAGAGAACGTCAAAATTGGGCGAGGCACTTGCC
CATCCATGTGACTCAGGGATGTACGTGCCTGCTTCCTTACATCCTTCCTT
AGAAGGTCACACAGCCATCCTGATGACAGTGCTTCGTCTCCATGTGCGAC
GAATTGCTActcaccaacctccccactcgcGACGTGCATTCCTCTGTACC
TTTAAGGATCTCCAAGACGGGACCAAAGAGAAGTGTGGAACGGTACGTAT
ACACTAGCTActcaccaacctccccactcgcGACGTGCATTCCTCTGTAT
CATTAACGATCTCCAAGACGGGACCAAAGAGAAGTCTGGAACGGTACGTA
TACACTAGCAAGTTGCGAAGCTCATGCATCGATTCGTGAGAGTCGCCGGT
GCGACTGAATGAATGACATGAATGACACGACATCACACATGAATAATAGT
ACTGGCTCACAACGAACACTTTGCTTAGGCCTGGATAGATTGAGGCAAGT
ATGATCGAGGGGCTTCAAGCTATCGATCCCGAGTATGAGGAGCGGATGCT
GGCATTCGAAATGGACTGCgacaagggcaagggcgATGCATGGGCTTGCC
ATTCTGTGGGAGAATTTTTAGCCGTTGTCAAGGTGCGTTTGTCCACTAAT
GTGTCTGGAAAGTGCTATATCTGTCTCtcacgctttcccttccgcaGGGC
GACTACAACAAGGCGGCGAAGGTATACACAGACAATTGTGCAAAATACAG
TCACCCTCCCTCATGTTTTAATTTGGGACGCCTATATCTGGGCGGTCGCG
GGGTTCCTCAGAGCGACACGAGGTCGCTCAAGTGCTTTGACACTTCTTGT
AAAGCCGGGCACGGCATGGCCTGCCACCATATGGGGCTACTGCTCCTGTA
TGGGAAAGACGGCGGGTACGACGTTTCCAAGGACGTAAAGAAAGCGACGG
GTATCCTGAATAAGGCGTGCGGGGAGGGCATCCCTGATAGCTGCTACGCG
TTGGCCAGTCATCTGCTTCGGCACCTGCCGGAGGACAAGTCGCATGAACG
GGATGCTCTCAAGGCAAAGGGGTTATTGGAACAGGGTTGCGCGCGGGGAC
ATGGGCCCTCTTGTTTCAATTTGGCCGTCATGCACAAGAAGGGCGACACG
GGAATTCCTCGgtaagggcgggcggggtggtgggggtgttTGACGCTCAG
TTCACGGACACTTCCTTGCACAAATTCACAGAAACGAGCAAGAGTTTGAG
AAGTACAAAAAAGTAACggaggacctggtggagcAAACGGGCGCGCTGAC
GTGGAAGAAAGGGCACTAGAATACCCATGGCGTGCATGGCATACACGAGC
TGGAAGTCAACAATGCGTACAGGGGCATCTGCATTGTGCTTAGATGCCTA
ATATACCTAGGGTCGATGTTGCTTTGATTCGCTTTTTATAAGAATGTACA
GCGGGATTCAAACATGACCTCCCAGGGCTCACA back to topCoding sequence (CDS) from alignment at KK037250.1:227041..228623+ >rna8812 ID=rna8812|Name=rna8812|organism=Nannochloropsis gaditana|type=CDS|length=2052bp|location=Sequence derived from alignment at KK037250.1:227041..228623+ (Nannochloropsis gaditana) ATGATCGAGGGGCTTCAAGCTATCGATCCCGAGTATGAGGAGCGGATGCT GGCATTCGAAATGGACTGCgacaagggcaagggcgATGCATGGGCTTGCC ATTCTGTGGGAGAATTTTTAGCCGTTGTCAAGGGCGACTACAACAAGGCG GCGAAGGTATACACAGACAATTGTGCAAAATACAGTCACCCTCCCTCATG TTTTAATTTGGGACGCCTATATCTGGGCGGTCGCGGGGTTCCTCAGAGCG ACACGAGGTCGCTCAAGTGCTTTGACACTTCTTGTAAAGCCGGGCACGGC ATGGCCTGCCACCATATGGGGCTACTGCTCCTGTATGGGAAAGACGGCGG GTACGACGTTTCCAAGGACGTAAAGAAAGCGACGGGTATCCTGAATAAGG CGTGCGGGGAGGGCATCCCTGATAGCTGCTACGCGTTGGCCAGTCATCTG CTTCGGCACCTGCCGGAGGACAAGTCGCATGAACGGGATGCTCTCAAGGC AAAGGGGTTATTGGAACAGGGTTGCGCGCGGGGACATGGGCCCTCTTGTT TCAATTTGGCCGTCATGCACAAGAAGGGCGACACGGGAATTCCTCGAAAC GAGCAAGAGTTTGAGAAGTACAAAAAAGTAACggaggacctggtggagcA AACGGGCGCGCTGACGTGGAAGAAAGGGCACTAGATGATCGAGGGGCTTC AAGCTATCGATCCCGAGTATGAGGAGCGGATGCTGGCATTCGAAATGGAC TGCgacaagggcaagggcgATGCATGGGCTTGCCATTCTGTGGGAGAATT TTTAGCCGTTGTCAAGGGCGACTACAACAAGGCGGCGAAGGTATACACAG ACAATTGTGCAAAATACAGTCACCCTCCCTCATGTTTTAATTTGGGACGC CTATATCTGGGCGGTCGCGGGGTTCCTCAGAGCGACACGAGGTCGCTCAA GTGCTTTGACACTTCTTGTAAAGCCGGGCACGGCATGGCCTGCCACCATA TGGGGCTACTGCTCCTGTATGGGAAAGACGGCGGGTACGACGTTTCCAAG GACGTAAAGAAAGCGACGGGTATCCTGAATAAGGCGTGCGGGGAGGGCAT CCCTGATAGCTGCTACGCGTTGGCCAGTCATCTGCTTCGGCACCTGCCGG AGGACAAGTCGCATGAACGGGATGCTCTCAAGGCAAAGGGGTTATTGGAA CAGGGTTGCGCGCGGGGACATGGGCCCTCTTGTTTCAATTTGGCCGTCAT GCACAAGAAGGGCGACACGGGAATTCCTCGAAACGAGCAAGAGTTTGAGA AGTACAAAAAAGTAACggaggacctggtggagcAAACGGGCGCGCTGACG TGGAAGAAAGGGCACTAGATGATCGAGGGGCTTCAAGCTATCGATCCCGA GTATGAGGAGCGGATGCTGGCATTCGAAATGGACTGCgacaagggcaagg gcgATGCATGGGCTTGCCATTCTGTGGGAGAATTTTTAGCCGTTGTCAAG GGCGACTACAACAAGGCGGCGAAGGTATACACAGACAATTGTGCAAAATA CAGTCACCCTCCCTCATGTTTTAATTTGGGACGCCTATATCTGGGCGGTC GCGGGGTTCCTCAGAGCGACACGAGGTCGCTCAAGTGCTTTGACACTTCT TGTAAAGCCGGGCACGGCATGGCCTGCCACCATATGGGGCTACTGCTCCT GTATGGGAAAGACGGCGGGTACGACGTTTCCAAGGACGTAAAGAAAGCGA CGGGTATCCTGAATAAGGCGTGCGGGGAGGGCATCCCTGATAGCTGCTAC GCGTTGGCCAGTCATCTGCTTCGGCACCTGCCGGAGGACAAGTCGCATGA ACGGGATGCTCTCAAGGCAAAGGGGTTATTGGAACAGGGTTGCGCGCGGG GACATGGGCCCTCTTGTTTCAATTTGGCCGTCATGCACAAGAAGGGCGAC ACGGGAATTCCTCGAAACGAGCAAGAGTTTGAGAAGTACAAAAAAGTAAC ggaggacctggtggagcAAACGGGCGCGCTGACGTGGAAGAAAGGGCACT AG back to top
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