EWM21907.1, cds8766 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21907.1 vs. NCBI_GenBank
Match: gi|585102253|gb|EWM21907.1| (nudix hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 810.061 bits (2091), Expect = 0.000e+0 Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0
Query: 1 MWEPLLVFLMFCRSSQAFTNRMHSTRRSPLGIVHTFSGMDIDRSRVEAELKEASAFQNALRSHGAAFALFHGTSALVITDSPMKLAFHDAEKLQTLYEISLQQFEPSLTCISNDVGNSIPIYPCIALGASASGWAFAVDVSNRSRNEFEVKNEAEGNLRFEPVRALLATLNQRDIAMAGLGASTLAWHRQHQFCGLCGSRMVAVEAGGRRACTSETCRNRAYPRVDPVVIALVQDPVRDKILLGRQSVYRPMMYSCLAGYVGPCESLEEAVRREVKEESGIDVGEMSYHSSQPWPIGRGASCQMMVGFTATATSTEIHIDTNELEDCRWFSRAEVAEAEELVVARRPGPSDESSKTLSIPGPYAIAHHLIKNWLSTTKAPLQASGRNKL 389
MWEPLLVFLMFCRSSQAFTNRMHSTRRSPLGIVHTFSGMDIDRSRVEAELKEASAFQNALRSHGAAFALFHGTSALVITDSPMKLAFHDAEKLQTLYEISLQQFEPSLTCISNDVGNSIPIYPCIALGASASGWAFAVDVSNRSRNEFEVKNEAEGNLRFEPVRALLATLNQRDIAMAGLGASTLAWHRQHQFCGLCGSRMVAVEAGGRRACTSETCRNRAYPRVDPVVIALVQDPVRDKILLGRQSVYRPMMYSCLAGYVGPCESLEEAVRREVKEESGIDVGEMSYHSSQPWPIGRGASCQMMVGFTATATSTEIHIDTNELEDCRWFSRAEVAEAEELVVARRPGPSDESSKTLSIPGPYAIAHHLIKNWLSTTKAPLQASGRNKL
Sbjct: 1 MWEPLLVFLMFCRSSQAFTNRMHSTRRSPLGIVHTFSGMDIDRSRVEAELKEASAFQNALRSHGAAFALFHGTSALVITDSPMKLAFHDAEKLQTLYEISLQQFEPSLTCISNDVGNSIPIYPCIALGASASGWAFAVDVSNRSRNEFEVKNEAEGNLRFEPVRALLATLNQRDIAMAGLGASTLAWHRQHQFCGLCGSRMVAVEAGGRRACTSETCRNRAYPRVDPVVIALVQDPVRDKILLGRQSVYRPMMYSCLAGYVGPCESLEEAVRREVKEESGIDVGEMSYHSSQPWPIGRGASCQMMVGFTATATSTEIHIDTNELEDCRWFSRAEVAEAEELVVARRPGPSDESSKTLSIPGPYAIAHHLIKNWLSTTKAPLQASGRNKL 389
BLAST of EWM21907.1 vs. NCBI_GenBank
Match: gi|1040853321|ref|XP_017238000.1| (PREDICTED: nudix hydrolase 19, chloroplastic-like [Daucus carota subsp. sativus] >gi|1021042666|gb|KZN00447.1| hypothetical protein DCAR_009201 [Daucus carota subsp. sativus]) HSP 1 Score: 225.713 bits (574), Expect = 1.009e-66 Identity = 122/272 (44.85%), Postives = 164/272 (60.29%), Query Frame = 0
Query: 136 FAVDVSNRSRNEFEVKNEAEGNLRFEPVRALLAT------LNQRDIAMAGLGASTLAWHRQHQFCGLCGSRMVAVEAGGRRACTSETCRNRAYPRVDPVVIALVQDPVRDKILLGRQSVYRPMMYSCLAGYVGPCESLEEAVRREVKEESGIDVGEMSYHSSQPWPIGRGA-SCQMMVGFTATATSTEIHIDTNELEDCRWFSRAEV-----------AEAEELVVARRPGPSDESSKTLS--------------IPGPYAIAHHLIKNWLS 375
+A+DVS+ E E+ ++ L F V +L+ L D+A+AG + L WH FCG CG + V ++AG R+ C++E+C+ R YPRVDPVVI LV D RD+ LL RQS + P M+S LAG++ P ESLEEAV+RE EE+GI+VGE+ YHSSQPWP+G + CQ+MVGF A A S EI++D NELED +WFSR +V A+ V ++ E S LS IPGPYA+AHHLI +W++
Sbjct: 114 WAIDVSDAGDLENEM---SDMQLSFVDVMSLMVATDWTNQLVMADLAIAGQAKALLEWHITSCFCGKCGEKTVPIDAGRRKQCSNESCKKRIYPRVDPVVIMLVVDKQRDRALLSRQSKFVPRMWSTLAGFIEPGESLEEAVKRETWEETGIEVGEVIYHSSQPWPVGPSSMPCQLMVGFLAYAKSFEINVDKNELEDAQWFSREDVKKALTFAEYEKAQTTTAVKVKQMSKGVEKSFNLSLDFNMESGELASMFIPGPYAVAHHLIASWVN 382
BLAST of EWM21907.1 vs. NCBI_GenBank
Match: gi|326512898|dbj|BAK03356.1| (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 223.016 bits (567), Expect = 1.393e-65 Identity = 124/270 (45.93%), Postives = 160/270 (59.26%), Query Frame = 0
Query: 136 FAVDVSNRSRNEFEVKNEAEGNLRFEPVRALLATLNQRD------IAMAGLGASTLAWHRQHQFCGLCGSRMVAVEAGGRRACTSETCRNRAYPRVDPVVIALVQDPVRDKILLGRQSVYRPMMYSCLAGYVGPCESLEEAVRREVKEESGIDVGEMSYHSSQPWPIGRGA-SCQMMVGFTATATSTEIHIDTNELEDCRWFSRAEVAEA---EELVVARRP--------------GPSDESSKTLS--------IPGPYAIAHHLIKNW 373
+AVDVS F E + F +R L+ + RD +A+AG + L WH +FCG CG++ V VEAG R+ C +E+C+ R YPRVDPVVI LV D D+ LL RQS + P M+SCLAG++ P ESLEEAVRRE EE+GI+VG++ YHSSQPWP+G CQ+MVGF A A S +IH+D ELED +W SR +V +A E A+R GPS S ++ +PGPYAIAHHLI +W
Sbjct: 119 WAVDVSELEGAGFAGAGEEQSA--FVDLRTLMVAADWRDTDAMGELAIAGHARALLEWHNTAKFCGACGAKAVPVEAGTRKQCGNESCKKRIYPRVDPVVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGQVVYHSSQPWPVGPNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRSSALKVNQICKGAERGPSTSSDLSVESEEPAPMFVPGPYAIAHHLISSW 386
BLAST of EWM21907.1 vs. NCBI_GenBank
Match: gi|1002273851|ref|XP_015641243.1| (PREDICTED: nudix hydrolase 19, chloroplastic [Oryza sativa Japonica Group] >gi|55295798|dbj|BAD67649.1| MutT/nudix protein-like [Oryza sativa Japonica Group] >gi|113594797|dbj|BAF18671.1| Os06g0141100 [Oryza sativa Japonica Group] >gi|125553992|gb|EAY99597.1| hypothetical protein OsI_21575 [Oryza sativa Indica Group] >gi|937921166|dbj|BAS96083.1| Os06g0141166 [Oryza sativa Japonica Group]) HSP 1 Score: 223.016 bits (567), Expect = 1.636e-65 Identity = 127/279 (45.52%), Postives = 161/279 (57.71%), Query Frame = 0
Query: 136 FAVDVSNRSRNEFEVKNEAEGNLRFEPVRALLATLNQRD------IAMAGLGASTLAWHRQHQFCGLCGSRMVAVEAGGRRACTSETCRNRAYPRVDPVVIALVQDPVRDKILLGRQSVYRPMMYSCLAGYVGPCESLEEAVRREVKEESGIDVGEMSYHSSQPWPIGRGA-SCQMMVGFTATATSTEIHIDTNELEDCRWFSRAEVAEAEELV-------------------VARRPGPS------DESSKTLSIPGPYAIAHHLIKNWL--STTKAP 380
+AVDVS R + + +G+ F +R L+ + RD +A+AG + L WH +FCG CGSR V EAG R+ C++E+C+ R YPRVDPVVI LV D D+ LL RQS + P M+SCLAG++ P ESLEEAVRRE EE+GI VGE+ YHSSQPWP+G CQ+MVGF A A S EIH+D ELED +W SR +V +A V +R S E + +PGPYAIAHHLI +W KAP
Sbjct: 127 WAVDVSER-----DGEGAGDGSA-FVDLRTLMVATDWRDKDAMGDLAIAGHARALLEWHSTAKFCGACGSRAVPAEAGRRKQCSNESCKKRIYPRVDPVVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIQVGEVIYHSSQPWPVGPSTMPCQLMVGFFAYAKSLEIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRTNALKVNQICKGVEKRQSISADLKIESEEPAPMFVPGPYAIAHHLISSWAFEGAPKAP 399
BLAST of EWM21907.1 vs. NCBI_GenBank
Match: gi|1035958135|gb|OAY79441.1| (Nudix hydrolase 19, chloroplastic [Ananas comosus]) HSP 1 Score: 223.016 bits (567), Expect = 1.983e-65 Identity = 130/272 (47.79%), Postives = 163/272 (59.93%), Query Frame = 0
Query: 136 FAVDVSNRSRNEFEVKNEAEGNLRFEPVRALLATLNQRDI------AMAGLGASTLAWHRQHQFCGLCGSRMVAVEAGGRRACTSETCRNRAYPRVDPVVIALVQDPVRDKILLGRQSVYRPMMYSCLAGYVGPCESLEEAVRREVKEESGIDVGEMSYHSSQPWPIGRGA-SCQMMVGFTATATSTEIHIDTNELEDCRWFSRAEVAEA---EELVVARRPG-----------------PSDESS------KTLSIPGPYAIAHHLIKNWL 374
+A+DVS SR E+ E +G L F +R L+ + DI A+AG + L WHR +FCG CGSR V + AG R+ CT ETC+ R YPRVDPVVI LV D D+ LL RQS + P M+SCLAG++ P ESLEEAVRRE EE+GI+VGE+ YHSSQPWP+G + CQ+MVGF A ATS EI +D ELED W SR +V +A E A+R PS + + + IPGP+AIAHHLI W+
Sbjct: 118 WAIDVSE-SRG-VELGGERDG-LCFVELRTLMVATDWADIGTMGELAIAGHARALLEWHRISRFCGNCGSRTVPIGAGRRKQCTDETCKKRVYPRVDPVVIMLVIDKANDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGEVVYHSSQPWPVGPNSMPCQLMVGFFAYATSFEIRVDKEELEDAEWHSREDVKKALTFAEYEKAQRTAAFKVNQMCKGVEKGQNFPSSDFNVESGELAQMFIPGPFAIAHHLISTWV 386
BLAST of EWM21907.1 vs. NCBI_GenBank
Match: gi|1021036802|gb|KZM94585.1| (hypothetical protein DCAR_017828 [Daucus carota subsp. sativus]) HSP 1 Score: 221.476 bits (563), Expect = 7.505e-65 Identity = 124/272 (45.59%), Postives = 162/272 (59.56%), Query Frame = 0
Query: 136 FAVDVSNRSR--NEFEVKNEAEGNLRFEPVRALLAT------LNQRDIAMAGLGASTLAWHRQHQFCGLCGSRMVAVEAGGRRACTSETCRNRAYPRVDPVVIALVQDPVRDKILLGRQSVYRPMMYSCLAGYVGPCESLEEAVRREVKEESGIDVGEMSYHSSQPWPIGRGA-SCQMMVGFTATATSTEIHIDTNELEDCRWFSRAEVAEA---EELVVARRPGPSD--------ESSKTLS--------------IPGPYAIAHHLIKNW 373
+AVDVS N+F + L F +R L+ L D+A+AG + L WH+ +FCG CG + V +EAG R+ C+SE C+ R YPRVDPVVI LV D D+ LL RQS + P M+SCLAG++ P ESLEEAVRRE EE+GI+VGE+ YHSSQPWP+G + CQ+MVGF A A S EI++D ELED +W SR ++ +A E A++ E S++LS +PGPYAIAHHLI +W
Sbjct: 115 WAVDVSEEDGLVNKFGSRQ-----LCFTELRTLMVATDWANQLAMADLAIAGHARALLEWHKTSRFCGSCGEKTVPMEAGRRKQCSSEACKKRVYPRVDPVVIMLVIDKQNDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGEVIYHSSQPWPVGPSSMPCQLMVGFFAYAKSLEINVDKEELEDAKWHSREDIKKALTFAEYEKAQKTAAMKVNQMCKGVERSQSLSADFNVESGELAPMFVPGPYAIAHHLIASW 381
BLAST of EWM21907.1 vs. NCBI_GenBank
Match: gi|1040891436|ref|XP_017254108.1| (PREDICTED: nudix hydrolase 19, chloroplastic [Daucus carota subsp. sativus]) HSP 1 Score: 221.861 bits (564), Expect = 1.013e-64 Identity = 124/272 (45.59%), Postives = 162/272 (59.56%), Query Frame = 0
Query: 136 FAVDVSNRSR--NEFEVKNEAEGNLRFEPVRALLAT------LNQRDIAMAGLGASTLAWHRQHQFCGLCGSRMVAVEAGGRRACTSETCRNRAYPRVDPVVIALVQDPVRDKILLGRQSVYRPMMYSCLAGYVGPCESLEEAVRREVKEESGIDVGEMSYHSSQPWPIGRGA-SCQMMVGFTATATSTEIHIDTNELEDCRWFSRAEVAEA---EELVVARRPGPSD--------ESSKTLS--------------IPGPYAIAHHLIKNW 373
+AVDVS N+F + L F +R L+ L D+A+AG + L WH+ +FCG CG + V +EAG R+ C+SE C+ R YPRVDPVVI LV D D+ LL RQS + P M+SCLAG++ P ESLEEAVRRE EE+GI+VGE+ YHSSQPWP+G + CQ+MVGF A A S EI++D ELED +W SR ++ +A E A++ E S++LS +PGPYAIAHHLI +W
Sbjct: 139 WAVDVSEEDGLVNKFGSRQ-----LCFTELRTLMVATDWANQLAMADLAIAGHARALLEWHKTSRFCGSCGEKTVPMEAGRRKQCSSEACKKRVYPRVDPVVIMLVIDKQNDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGEVIYHSSQPWPVGPSSMPCQLMVGFFAYAKSLEINVDKEELEDAKWHSREDIKKALTFAEYEKAQKTAAMKVNQMCKGVERSQSLSADFNVESGELAPMFVPGPYAIAHHLIASW 405
BLAST of EWM21907.1 vs. NCBI_GenBank
Match: gi|729436016|ref|XP_010520594.1| (PREDICTED: nudix hydrolase 19, chloroplastic-like [Tarenaya hassleriana]) HSP 1 Score: 221.09 bits (562), Expect = 1.477e-64 Identity = 126/273 (46.15%), Postives = 161/273 (58.97%), Query Frame = 0
Query: 136 FAVDVSNRSR--NEFEVKNEAEGNLRFEPVRALLATLN------QRDIAMAGLGASTLAWHRQHQFCGLCGSRMVAVEAGGRRACTSETCRNRAYPRVDPVVIALVQDPVRDKILLGRQSVYRPMMYSCLAGYVGPCESLEEAVRREVKEESGIDVGEMSYHSSQPWPIGRGA-SCQMMVGFTATATSTEIHIDTNELEDCRWFSRAEVAEA---EELVVARRPGPSD--------ESSKTLS--------------IPGPYAIAHHLIKNWL 374
+AVDVS S +EF + L F +R L+ + D+A+AG + L WH QFCG CGS V EAG R+ C++ETC+ R YPR+DPVVI LV D D+ LL RQS + P M+SCLAG++ P ESLEEAVRRE EE+GI+VGE+ YHSSQPWP+G + CQ+M+GF A A +TEI++D +ELED W SR +V +A E A+R E K LS IPGP+AIAHHLI W+
Sbjct: 144 WAVDVSEESGLVDEFGSRK-----LYFIELRTLMVAADWADERAMSDLAIAGHARALLEWHNVSQFCGHCGSSTVPTEAGRRKQCSNETCKKRVYPRLDPVVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGEVVYHSSQPWPVGPSSMPCQLMLGFFAFAKTTEINVDKDELEDAEWHSREDVRKALTFAEYRKAQRTASEKIEQICKGVERGKNLSTDFNVESGELAPMFIPGPFAIAHHLISTWV 411
BLAST of EWM21907.1 vs. NCBI_GenBank
Match: gi|475557057|gb|EMT12748.1| (Nudix hydrolase 19, chloroplastic [Aegilops tauschii]) HSP 1 Score: 214.157 bits (544), Expect = 4.451e-64 Identity = 108/226 (47.79%), Postives = 140/226 (61.95%), Query Frame = 0
Query: 174 DIAMAGLGASTLAWHRQHQFCGLCGSRMVAVEAGGRRACTSETCRNRAYPRVDPVVIALVQDPVRDKILLGRQSVYRPMMYSCLAGYVGPCESLEEAVRREVKEESGIDVGEMSYHSSQPWPIGRGA-SCQMMVGFTATATSTEIHIDTNELEDCRWFSRAEVAEA---EELVVARRPGP----------------------SDESSKTLSIPGPYAIAHHLIKNW 373
++A+AG + L WH +FCG CG++ V EAG R+ C++E+C+ R YPRVDPVVI LV D D+ LL RQS + P M+SCLAG++ P ESLEEAVRRE EE+GI+VG++ YHSSQPWP+G CQ+MVGF A A S +IH+D ELED +W SR +V +A E A+R E + +PGPYAIAHHLI +W
Sbjct: 3 ELAIAGHARALLEWHNTAKFCGACGAKAVPTEAGTRKQCSNESCKKRIYPRVDPVVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGQVIYHSSQPWPVGPNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRSSALKVNQICKGAERGQSTSSDLSVESEEPAPMFVPGPYAIAHHLISSW 228
BLAST of EWM21907.1 vs. NCBI_GenBank
Match: gi|728832611|gb|KHG12054.1| (Nudix hydrolase 19, chloroplastic -like protein [Gossypium arboreum]) HSP 1 Score: 219.164 bits (557), Expect = 7.356e-64 Identity = 120/270 (44.44%), Postives = 160/270 (59.26%), Query Frame = 0
Query: 136 FAVDVSNRSRNEFEVKNEAEGNLRFEPVRALLATLNQRD------IAMAGLGASTLAWHRQHQFCGLCGSRMVAVEAGGRRACTSETCRNRAYPRVDPVVIALVQDPVRDKILLGRQSVYRPMMYSCLAGYVGPCESLEEAVRREVKEESGIDVGEMSYHSSQPWPIGRGA-SCQMMVGFTATATSTEIHIDTNELEDCRWFSRAEVAEAEELVVARRPGPSD-----------ESSKTLS--------------IPGPYAIAHHLIKNW 373
+AVDVS SR E+ N+ F +R L+ + D +A+AG + L WH +FCG CG + + EAG R+ C++E+C+ R YPRVDPVVI LV D D+ LLGRQS + P M+SCLAG++ P ESLEEAVRRE EE+GI+VGE+ YHSSQPWP+G + CQ+MVGF A A S EI++D ELED +W SR +V +A + ++ + E ++LS PGP+AIAHHLI W
Sbjct: 124 WAVDVSGESRLVPELGNK---QFCFVELRTLMVATDWSDSIAMGELAIAGHARALLEWHNLSRFCGHCGEKTIPKEAGRRKQCSNESCKKRIYPRVDPVVIMLVIDRENDRALLGRQSRFVPRMWSCLAGFIEPGESLEEAVRRETHEEAGIEVGEVVYHSSQPWPVGPSSIPCQLMVGFFAYAKSLEINVDKEELEDAQWHSREDVRKALAVAEYKKAQKTTAAKVDQMCKGVEKGQSLSADFNVESGELAPMFFPGPFAIAHHLISTW 390 The following BLAST results are available for this feature:
BLAST of EWM21907.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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