EWM21924.1, cds8752 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|585102270|gb|EWM21924.1| (uracil phosphoribosyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 536.569 bits (1381), Expect = 0.000e+0 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0 Query: 1 MPSSATKRPTSPFPAKSCQEASDLPPSVHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFNAHVGEPDDETSVLNLCATKKTKRSDNGC 261 MPSSATKRPTSPFPAKSCQEASDLPPSVHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFNAHVGEPDDETSVLNLCATKKTKRSDNGC Sbjct: 1 MPSSATKRPTSPFPAKSCQEASDLPPSVHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFNAHVGEPDDETSVLNLCATKKTKRSDNGC 261
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|953502351|emb|CEG36537.1| (uracil phosphoribosyltransferase [Plasmopara halstedii]) HSP 1 Score: 226.098 bits (575), Expect = 1.126e-70 Identity = 108/219 (49.32%), Postives = 156/219 (71.23%), Query Frame = 0 Query: 28 VHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFNAHVGEPDDETSVL 246 V C+ HP+L HK+T LRD +T R FR+L+RE+T YLGY+AT ++ P+ ++ G +G +LS +A+VPILR GLGMVD M +ILPNA+V+H+GM+ N +SL LP+QYYN+LPKE D D+ +L+P+IATAGT AT+++LK WG KKI V+ + + QGL ++ +P + + +AAID+ +S DG+ILPG+GDA +R F H + +T L Sbjct: 20 VWCATHPVLRHKLTKLRDERTDCRAFRYLLREVTFYLGYDATDDLETIPKQIKTPKGDHQGAELSTNVALVPILRAGLGMVDPMLDILPNASVHHIGMYRNKQSL-LPVQYYNKLPKECD--VDVAIILEPVIATAGTIVATLAVLKTWGVKKIKVVSAIASKQGLQEVCAKNPGVEIFLAAIDDELSEDGYILPGLGDAGDREF--HTSAQNGQTYFL 233
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|695414834|ref|XP_009526406.1| (hypothetical protein PHYSODRAFT_544971, partial [Phytophthora sojae] >gi|348677531|gb|EGZ17348.1| hypothetical protein PHYSODRAFT_544971, partial [Phytophthora sojae]) HSP 1 Score: 225.713 bits (574), Expect = 1.132e-70 Identity = 104/206 (50.49%), Postives = 153/206 (74.27%), Query Frame = 0 Query: 28 VHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFN 233 V C+ HP+L HK+T LRD +T +R FRHL+RE+T YLGY+AT ++ P+ ++ G +G +LS +A+VPILR GLGMV+ M ++LPNA V+H+GM+ N +SL LP+QYYN+LPKE + AD+ VL+P+IATAGT AT+++LK WG +KI ++ + + QGL ++ +PD+ + +AAID+ +S DG+ILPG+GDA +R F Sbjct: 20 VWCAVHPVLRHKLTKLRDERTDSRVFRHLLREVTFYLGYDATDDLETVPKKIKTPKGEHQGAELSTSVALVPILRAGLGMVEPMLDVLPNATVHHIGMYRNKQSL-LPVQYYNKLPKECN--ADVAIVLEPVIATAGTILATLAVLKTWGVEKIKIVSAIASKQGLQEVCAKNPDVEIFLAAIDDDLSEDGYILPGLGDAGDREFQ 222
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|567959916|gb|ETK85480.1| (uracil phosphoribosyltransferase [Phytophthora parasitica]) HSP 1 Score: 219.935 bits (559), Expect = 3.083e-68 Identity = 100/206 (48.54%), Postives = 153/206 (74.27%), Query Frame = 0 Query: 28 VHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFN 233 V C+ HP+L HK+T LRD +T +R FRHL+RE+T YLGY+AT ++ P+ ++ G +G +LS +A+VPILR GLGMV+ M ++LPNA+V+H+GM+ N +SL LP+QYYN+LPKE + D+ +L+P+IATAGT AT+++LK WG +KI ++ + + QGL ++ +PD+ + +AAID+ ++ DG+I+PG+GDA +R F Sbjct: 20 VWCAVHPVLRHKLTKLRDERTDSRVFRHLLREVTFYLGYDATDDLETVPKKIKTPKGDHKGAELSTSVALVPILRAGLGMVEPMLDLLPNASVHHLGMYRNKQSL-LPVQYYNKLPKECN--VDVAIILEPVIATAGTIIATLAVLKTWGVEKIKIVSAIASKQGLQEVCAKNPDVEIFLAAIDDDLTEDGYIMPGLGDAGDREFQ 222
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|566022615|gb|ETI45526.1| (uracil phosphoribosyltransferase [Phytophthora parasitica P1569] >gi|567988604|gb|ETL38879.1| uracil phosphoribosyltransferase [Phytophthora parasitica] >gi|568017851|gb|ETL92028.1| uracil phosphoribosyltransferase [Phytophthora parasitica] >gi|568048266|gb|ETM45325.1| uracil phosphoribosyltransferase [Phytophthora parasitica] >gi|570326192|gb|ETO74140.1| uracil phosphoribosyltransferase [Phytophthora parasitica P1976] >gi|570950049|gb|ETP15306.1| uracil phosphoribosyltransferase [Phytophthora parasitica CJ01A1] >gi|570983579|gb|ETP43383.1| uracil phosphoribosyltransferase [Phytophthora parasitica P10297]) HSP 1 Score: 219.935 bits (559), Expect = 3.220e-68 Identity = 100/206 (48.54%), Postives = 153/206 (74.27%), Query Frame = 0 Query: 28 VHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFN 233 V C+ HP+L HK+T LRD +T +R FRHL+RE+T YLGY+AT ++ P+ ++ G +G +LS +A+VPILR GLGMV+ M ++LPNA+V+H+GM+ N +SL LP+QYYN+LPKE + D+ +L+P+IATAGT AT+++LK WG +KI ++ + + QGL ++ +PD+ + +AAID+ ++ DG+I+PG+GDA +R F Sbjct: 20 VWCAVHPVLRHKLTKLRDERTDSRVFRHLLREVTFYLGYDATDDLETVPKKIKTPKGDHKGAELSTSVALVPILRAGLGMVEPMLDLLPNASVHHLGMYRNKQSL-LPVQYYNKLPKECN--VDVAIILEPVIATAGTIIATLAVLKTWGVEKIKIVSAIASKQGLQEVCAKNPDVEIFLAAIDDDLTEDGYIMPGLGDAGDREFQ 222
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|1173960704|gb|OQS06806.1| (uracil phosphoribosyltransferase [Thraustotheca clavata]) HSP 1 Score: 219.164 bits (557), Expect = 5.413e-68 Identity = 107/212 (50.47%), Postives = 151/212 (71.23%), Query Frame = 0 Query: 23 DLPPS--VHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLF 232 +LP S + + HP+L HK+T LRD KT FRHL+RE+T YLGYEAT ++ + P+ + LGP +G +L+ +A+VPILR GLGMV+ M ++LPNA V+H+GM+ N SL LP+QYYN+LPK+ + D VL+P+IATAGT ATV+IL WG K+ +I + + GL +L + HP++ V VAAIDE +S +G+I+PG+GDA +R F Sbjct: 10 NLPSSSKIIVATHPVLAHKLTKLRDSKTDANLFRHLLREITFYLGYEATHDLAVIPKNITTPLGPHQGAELATSVALVPILRAGLGMVEPMLDLLPNAVVHHIGMYRNKNSL-LPVQYYNKLPKDCN--IDTAIVLEPMIATAGTIIATVAILHVWGVSKVKIISTIASKSGLKELFEQHPNVEVIVAAIDENLSEEGYIVPGLGDAGDRQF 218
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|813154005|ref|XP_012201305.1| (uracil phosphoribosyltransferase [Saprolegnia parasitica CBS 223.65] >gi|641533879|gb|KDO27845.1| uracil phosphoribosyltransferase [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 219.164 bits (557), Expect = 6.027e-68 Identity = 111/228 (48.68%), Postives = 158/228 (69.30%), Query Frame = 0 Query: 16 KSCQEASDL--PP--SVHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFN--AHVG 237 K C +A+ L PP V + HP+L HK+T LRD KT FRHL+RE+T YLGYEAT+++ + P+ + LGP +G +L+ +A+VPILR GLGMV+ M ++LPNA V+H+GM+ N SL LP+QYYN+LP + + D+ +L+P+IATAGT ATV++L WG +I +I + + GL +L HP + V VAAIDE +S +G+I+PG+GDA +R F+ AH G Sbjct: 2 KHCADAASLGLPPHSKVIVATHPVLAHKLTKLRDAKTDANLFRHLLREITFYLGYEATSDLAVIPKSITTPLGPHQGAELASVVALVPILRAGLGMVEPMLDLLPNARVHHIGMYRNKNSL-LPVQYYNKLPHDCN--VDVAIILEPVIATAGTIIATVAVLHAWGVNQIKIISSIASKNGLKELFAKHPGVEVIVAAIDETLSEEGYIVPGLGDAGDRQFDTVAHTG 226
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|1173931037|gb|OQR83614.1| (uracil phosphoribosyltransferase [Achlya hypogyna]) HSP 1 Score: 218.394 bits (555), Expect = 1.005e-67 Identity = 107/222 (48.20%), Postives = 154/222 (69.37%), Query Frame = 0 Query: 16 KSCQEASDLPPSVH----CSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFN 233 K+C +A+ L H + HP+L HK+T LRD KT FRHL+RE+T YLGYEAT ++ + P+ + LGP +G +L+ +A+VPILR GLGMV+ M ++LPNA V+H+GM+ N SL LP+QYYN+LPK+ + D+ +L+P+IATAGT ATV+IL WG ++ +I + + GL +L HP + V VAAIDE +S +G+I+PG+GDA +R F+ Sbjct: 2 KNCADAASLGLPAHSKVVVATHPVLAHKLTKLRDAKTDANLFRHLLREITFYLGYEATGDLAVVPKSITTPLGPHQGAELATSVALVPILRAGLGMVEPMLDLLPNARVHHIGMYRNKNSL-LPVQYYNKLPKDCN--VDVAIILEPVIATAGTIIATVAILHVWGVSQVKIISTIASKAGLKELFAKHPSVEVIVAAIDENLSEEGYIVPGLGDAGDRQFD 220
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|970645455|gb|KUF85926.1| (Uracil phosphoribosyltransferase [Phytophthora nicotianae]) HSP 1 Score: 218.394 bits (555), Expect = 1.369e-67 Identity = 99/206 (48.06%), Postives = 152/206 (73.79%), Query Frame = 0 Query: 28 VHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFN 233 V C+ HP+L HK+T LRD +T +R FRHL+RE+T YLGY+AT ++ P+ ++ G +G +LS +A+VPILR GLGMV+ M ++LPNA+V+H+GM+ N +SL LP+QYYN+LPKE + D+ +L+P+IAT GT AT+++LK WG +KI ++ + + QGL ++ +PD+ + +AAID+ ++ DG+I+PG+GDA +R F Sbjct: 20 VWCAVHPVLRHKLTKLRDERTDSRVFRHLLREVTFYLGYDATDDLETVPKKIKTPKGDHKGAELSTSVALVPILRAGLGMVEPMLDLLPNASVHHLGMYRNKQSL-LPVQYYNKLPKECN--VDVAIILEPVIATVGTIIATLAVLKTWGVEKIKIVSAIASKQGLQEVCAKNPDVEIFLAAIDDDLTEDGYIMPGLGDAGDREFQ 222
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|669137424|ref|XP_008604280.1| (uracil phosphoribosyltransferase [Saprolegnia diclina VS20] >gi|530744615|gb|EQC42857.1| uracil phosphoribosyltransferase [Saprolegnia diclina VS20]) HSP 1 Score: 217.624 bits (553), Expect = 2.401e-67 Identity = 110/228 (48.25%), Postives = 157/228 (68.86%), Query Frame = 0 Query: 16 KSCQEASDL--PP--SVHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFN--AHVG 237 K C + + L PP V + HP+L HK+T LRD KT FRHL+RE+T YLGYEAT+++ + P+ + LGP +G +L+ +A+VPILR GLGMV+ M ++LPNA V+H+GM+ N SL LP+QYYN+LP + + D+ +L+P+IATAGT ATV++L WG +I +I + + GL +L HP + V VAAIDE +S +G+I+PG+GDA +R F+ AH G Sbjct: 2 KHCADVASLGLPPHSKVVVATHPVLAHKLTKLRDAKTDANLFRHLLREITFYLGYEATSDLAVIPKSITTPLGPHQGAELASVVALVPILRAGLGMVEPMLDLLPNARVHHIGMYRNKNSL-LPVQYYNKLPHDCN--VDVAIILEPVIATAGTIIATVAVLHAWGVNQIKIISSIASKNGLKELFAKHPGVEVIVAAIDETLSEEGYIVPGLGDAGDRQFDTVAHTG 226 The following BLAST results are available for this feature:
BLAST of EWM21924.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|