rna8725, rna8725 (mRNA) Nannochloropsis gaditana

Overview
Namerna8725
Unique Namerna8725
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length734
Alignment locationKK037250.1:2761..4693 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101544g1.2179.mrna
Orig protein idgnl|cribi|Naga_101544g1.2179
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:2761..4693 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101544g1gene8456Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21977.1cds8696Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8725rna8725-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8725 ID=rna8725|Name=rna8725|organism=Nannochloropsis gaditana|type=mRNA|length=734bp
CAAAACAGTAAATCAAGACTCAAGCCAGCAAGAGTCGTGACTTTTGCCAT
TTTGTGGTCATTGTCTCCCTTTAGTCAAGTCAGCAGCCTATACTCCGCAG
TGCTACGCACCGCGCAGGGCCTCGAATCGTTTCGAAAAAAAGGCGAAATT
TCAGCCTTTTTTCCCTGTAGTTGCCAGCTCTCTTTCTCTTCGGACTGAGA
AGGACGAGAAAGCATCATCGTGCGTCCCTGCTCAATGGATCTGCAACCCT
CCCTGACTCCCAATAACATCATTCTCAGCACCCAAAGGAGTGAGACTCAG
ACCCAGCATTGCAGCCGAAAAACTCGTCGTTCTGCCAATCGCATCACTTT
GGGCACCGCAGCGGCCGCGTCTACTTTTTGTCTCCTCTTCGCCGCTCCCG
TGCACGCGTTCCACCCCGTCATCCCTTCGCCCATGTTGCTCAGGCGACTG
GCACTCTCAACCTCCTCCTCCTTCCTCCTCCCTTCCTCCTCTCCCACGCC
CTCGGTACGCCCCGGCGGCCGCACGTTGACCGCCTGGCTCCGCCCTTTTT
CCAGCACTGCCAAACCTGCTTCCAAGCCTCTCACGGAGACGCCGCCCCAG
CGCCTGCCTGGTCGTCGCGTCACGGCCTTGAATTCCTACCGAGGAGGGGG
GGGAGGACGAAGCAGAGGCTCGTACGGCGGAGGGCGGGGCCGGGGGCCGC
AAGTGGATGATTTCAAGTCGTTTGGCGGTACGGA
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protein sequence of rna8725

>rna8725-protein ID=rna8725-protein|Name=rna8725|organism=Nannochloropsis gaditana|type=polypeptide|length=105bp
MIHSPSPCPLLSISQSLVMTMTPEMQQTHAHVSLATRSIASPPIMTGLEV
LRLSSFLGIVYLLACTKTDIVPRHSPSNSHAIEESLTKRLRRRDTAIPAR
LLCWC
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mRNA from alignment at KK037250.1:2761..4693-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8725 ID=rna8725|Name=rna8725|organism=Nannochloropsis gaditana|type=mRNA|length=1933bp|location=Sequence derived from alignment at KK037250.1:2761..4693- (Nannochloropsis gaditana)
TCCCTCCAGTTGCGGACCCTGGAGCGATCGGCGCTGAGGAAGCTCCAAAC
GGCTCTGGCCCCGAATATGGCCGACGTCCTCGCCTGCGCCCAGACGGCCG
ACGACAGCCACCGGCAAGGGCTGTACACAGTGCCTTTCCAAGAGCGGGAT
TCGGTGGGATATTATTCCTATTGAGAGAAGGCGTGGGCAAGTATTGAGGG
GGGGCCGGGGGGGCGCACGCGGTGACGAAGGACGTGGTTGGAGGGGGTAG
GGGCCTTGAGAGTACTCCTTCCACTCAATTTCCTTTGAAATAAAGGATGA
AAAGCTTTGTGGAGCGTGCAACCCGCTCCCAACAGGTCCGCTGGGGATAG
TGTGACAGCGGGAAACGGCTCGGAAATGAAGCCAGTGCAGAGGCCAGGGT
GGGACAGAGGAAGGGATGCACGCGTGGGGAATGTAAATATGCGGCGAGGA
TGACTGTGGAGAGGGATGGTGGGAGTCGGGGCTCGCCAAGAGTGTGGGAA
GGCTTTCCGAGTGACAGACGGTGGAGGAAGACGGCTTCAATAGTGGCAGA
GGAACGACATGCCGGATAACGAAGGGAGGTCAATCCATATGGAATCGAGC
CTGTACTGCTTGTAGGCTTTCTACGCTTCTTTTGTGCTTCTTGCAGATGT
TGGGTTCTCTATATTCATGGGTAGCACGCTTGGATGATTCACTCACCCTC
TCCGTGCCCCCTCCTTTCGATTTCTCAATCTCTAGTCATGACCATGACCC
CTGAAATGCAGCAGACTCATGCTCACGTGTCTCTGGCAACCAGATCTATT
GCCTCGCCCCCTATCATGACGGGGCTGGAAGTGCTTCGCCTCTCCAGCTT
TTTGGGAATTGTATACCTCCTTGCCTGCACGAAAACTGACATTGTCCCGA
GACACTCACCCTCCAATTCTCATGCAATTGAGGAATCTTTGACAAAAAGA
TTACGCAGACGTGACACTGCCATTCCAGCGCGGCTCTTGTGTTGGTGCTA
AAATTAAATAGATCGTGCCACCGCCGCCTTTGTACATTTCCTCCCGACCT
CCTCTCTTCGAGATCTCAACAACACAGCGACGTGAAAGTCATGGCGCTTC
CCATTCAGCCACAAGCAGAAAAAAAATCCACGCAAGCAAGCCATAGATAT
CTCTAAAGGAACTTTACCCCTGGAGAGATGGAAGACGCCCCGACGAACGT
ATTTTGCCTTCTATTGCACCCCAGGGTGTGAGCTTCTGTCCGTTGTAGGC
GGATAGGGTTTACGAGGAAGCGTTTTCCCAAGACCATCATTTGAGCATTC
ATGGAGCGACGAACCCTCCCGCACACGTCGGACCATGTTTAAAAGGGAGT
TCTCTTTGAAAAATGCGCACCGTAGGTGTGTGCCCCGCCTTTCACCCCCT
CCTTCTCGATACATGATGCATCCATACCAACAGGCAGCAGACCTCAAGCC
GTCGCTATGGGTAATACGGTGCCCAGCGCCGCGTCTGTTGGATCAGGGGC
CCCTCCTGATGCGCGTCTTTTTTTGCAGAATGAACTGAACAAGTTCATCA
TCCAGGTGGGCAATGGTCTTGGGGCGAATAGGATGGACCCAGGACTAAGA
AGCATAGACGATGCGGGGAGGTTCGAGCCAAAGGTCAAACCGATAAGATT
CAGACAATTGCTGTGCCACAGCAAGGCTCCGCCCATTCAACCGTGGTTCT
TTCCTTCCTTTTTTCTCCCCCCCCCTTTCCAGGAACAACTTTCCAACAGC
AAATTTATGAAATCCTACCGGTGTAAGGTCGACGGTTTTCCGGTGGTGGT
CAAGGTGTACGTGCGGCGCAACGCGGAGGAGGTACGATGTGTATTTGGTG
ATGAGGAGGGAAGACGGGGCTCCGAGAAGGGAAAGGTTCGGGAGGGAGGG
GGAAGGGAGGAGGAAGGGAGCGGGTTTATATGA
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Coding sequence (CDS) from alignment at KK037250.1:2761..4693-

>rna8725 ID=rna8725|Name=rna8725|organism=Nannochloropsis gaditana|type=CDS|length=318bp|location=Sequence derived from alignment at KK037250.1:2761..4693- (Nannochloropsis gaditana)
ATGATTCACTCACCCTCTCCGTGCCCCCTCCTTTCGATTTCTCAATCTCT
AGTCATGACCATGACCCCTGAAATGCAGCAGACTCATGCTCACGTGTCTC
TGGCAACCAGATCTATTGCCTCGCCCCCTATCATGACGGGGCTGGAAGTG
CTTCGCCTCTCCAGCTTTTTGGGAATTGTATACCTCCTTGCCTGCACGAA
AACTGACATTGTCCCGAGACACTCACCCTCCAATTCTCATGCAATTGAGG
AATCTTTGACAAAAAGATTACGCAGACGTGACACTGCCATTCCAGCGCGG
CTCTTGTGTTGGTGCTAA
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Synonyms
Publications