EWM21985.1, cds8688 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21985.1 vs. NCBI_GenBank
Match: gi|585102369|gb|EWM21985.1| (hypothetical protein Naga_100745g2 [Nannochloropsis gaditana]) HSP 1 Score: 639.032 bits (1647), Expect = 0.000e+0 Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 0 Query: 1 MKTFSVHLVLLATFAATTCRNTHAQPVVTFDSPPSPAPVTDSPTSIPSATPTTTPSASPTASPTATPSAAPTNTPTNTPTATPTAKPSATPTTTPTPSPIGLPTATPTATPTATPTDVPTGASTATPTGTSTASPTSSPTALPTAMPTALPTNTPTASPTAIPTAIPTSPPTTTPTRNPTKTPTAVPTPSPSAVPTLGPNEIVTQGFLDSLVVSPGGPLTVSSDFIFVERPESDVFVSLTIGQEASASGFRNRTQKAIGARELTFKRSTLRPNTWRPKPRYSIVGNEVVWQLPFDGFVLKKTYKIKWKLRVDRGVTSGTQLPFILRVGSNMQDLMVTVL 339 MKTFSVHLVLLATFAATTCRNTHAQPVVTFDSPPSPAPVTDSPTSIPSATPTTTPSASPTASPTATPSAAPTNTPTNTPTATPTAKPSATPTTTPTPSPIGLPTATPTATPTATPTDVPTGASTATPTGTSTASPTSSPTALPTAMPTALPTNTPTASPTAIPTAIPTSPPTTTPTRNPTKTPTAVPTPSPSAVPTLGPNEIVTQGFLDSLVVSPGGPLTVSSDFIFVERPESDVFVSLTIGQEASASGFRNRTQKAIGARELTFKRSTLRPNTWRPKPRYSIVGNEVVWQLPFDGFVLKKTYKIKWKLRVDRGVTSGTQLPFILRVGSNMQDLMVTVL Sbjct: 1 MKTFSVHLVLLATFAATTCRNTHAQPVVTFDSPPSPAPVTDSPTSIPSATPTTTPSASPTASPTATPSAAPTNTPTNTPTATPTAKPSATPTTTPTPSPIGLPTATPTATPTATPTDVPTGASTATPTGTSTASPTSSPTALPTAMPTALPTNTPTASPTAIPTAIPTSPPTTTPTRNPTKTPTAVPTPSPSAVPTLGPNEIVTQGFLDSLVVSPGGPLTVSSDFIFVERPESDVFVSLTIGQEASASGFRNRTQKAIGARELTFKRSTLRPNTWRPKPRYSIVGNEVVWQLPFDGFVLKKTYKIKWKLRVDRGVTSGTQLPFILRVGSNMQDLMVTVL 339
BLAST of EWM21985.1 vs. NCBI_GenBank
Match: gi|1124996980|gb|OKZ65406.1| (hypothetical protein BHW05_02855 [Clostridium sp. 42_12]) HSP 1 Score: 117.857 bits (294), Expect = 9.484e-26 Identity = 99/170 (58.24%), Postives = 112/170 (65.88%), Query Frame = 0 Query: 24 AQPVVTFDSPPSPAPVTDSPTSIPSATPTTTPSASPTASPTATPSAAPTNTPTNTPTATPTAKPSATPTTTPTPSPIGLPTATPTATPTATPTDVPTGASTATPTGTSTASPTSSPTALPTAMPTALPTNTPTASPTAIPTAIPTSPPTTTPTRNPTKTPTAVPTPSPSA 193 A P+VT PAP +P++ P P+ P+A+PTA PTATP+A PT TPT PTATPTAKP+ATPT PT +P PTATPT PTATPT P TATPT TA+PT PTA PT PTA PT PTA+PT PTA PT PT TPT PT TPTA PT +PS Sbjct: 67 ASPIVT------PAP---TPSAAPQ--PSAKPTATPTAKPTATPTAKPTATPTVKPTATPTAKPTATPTVKPTATPTVKPTATPTVKPTATPTAKP----TATPTVKPTATPTVKPTATPTVKPTATPTVKPTATPTVKPTATPTVKPTATPTVKPTATPTAKPTATPSG 221 HSP 2 Score: 116.316 bits (290), Expect = 2.950e-25 Identity = 116/264 (43.94%), Postives = 140/264 (53.03%), Query Frame = 0 Query: 47 PSATPTTTPSASP--TASPTATPSAAPTNTPTNTPTATPTAKPSATPTTTPTPSPIGLPTATPTATPTATPTDVPTGASTATPTGTSTASPTSSPTALPTAMPTALPTNTPTASPTAIPTAIPTSPPTTTPTRNPTKTPTAVPTPSPSAVPTLGPNEIVTQGFLDSLVVSPGGPLTVSSDFIFVERPESD-VFVSLTIGQEASA---SGFRNRTQKAIGARELTF--KRSTLRPNTWRPKPRYSIVGNEVVWQLPFDGFVLKKT 302 P TP TPSA+P +A PTATP+A PT TPT PTATPT KP+ATPT PT +P PTATPT PTATPT PT TA PT T T PT++PT PTA PT PT TPT PTA PT PT+ PT PT PT PTA PT P+A P+ + V + ++ G L + + R E + V SL + +A GF +A G + +F K ST + I GN + FDG V KT Sbjct: 69 PIVTPAPTPSAAPQPSAKPTATPTAKPTATPTAKPTATPTVKPTATPTAKPTATPTVKPTATPTVKPTATPTVKPTATPTAKPTATPTVKPTATPTVKPTATPTVKPTATPTVKPTATPTVKPTATPTVKPTATPTVKPTATPTAKPTATPSGNAGQNVNLNGKKAFTIA-GYQLALG-----LTRDEVNTVLGSLKTDVKRTAKSPQGFDVIAFRA-GGNDKSFDEKYSTYILIYLKDDIVVGISGN--ASSMNFDGTVSDKT 323 HSP 3 Score: 115.931 bits (289), Expect = 4.517e-25 Identity = 89/152 (58.55%), Postives = 100/152 (65.79%), Query Frame = 0 Query: 48 SATPTTTPSASPTASPTATPSAAPTNTPTNTPTATPTAKPSATPTTTPTPSPIGLPTATPTATPTATPTDVPTGASTATPTGTSTASPTSSPTALPTAMPTALPTNTPTASPTAIPTAIPTSPPTTTPTRNPTKTPTAVPTPSPSAVPTLGP 199 SA+P TP+ +P+A+P PSA PT TPT PTATPTAKP+ATPT PT +P PTATPT PTATPT PT T PT T TA PT++PT PTA PT PT TPT PTA PT PT+ PT PT PT PTA PT P+A PT P Sbjct: 66 SASPIVTPAPTPSAAPQ--PSAKPTATPTAKPTATPTAKPTATPTVKPTATPTAKPTATPTVKPTATPTVKPTATPTVKPTATPTAKPTATPTVKPTATPTVKPTATPTVKPTATPTVKPTATPTVKPTATPTVKPTATPTVKPTATPTAKP 215 HSP 4 Score: 90.5077 bits (223), Expect = 2.156e-16 Identity = 84/155 (54.19%), Postives = 97/155 (62.58%), Query Frame = 0 Query: 47 PSATPTTTPSASPTASPTATPSAAPTNTPTNTPTATPTAKPSATPTTTPT--PSPIGLPTATPTATPTATPTDVPTGASTATPTGTSTASPTSSPTALPTAMPTALPTNTPTASPTAIPTAIPTSPPTTTPTRNPTKTPTAVPTPSPSAVPTLGP 199 PSA+P TP +P+A+P + + T TPT T TA P+A P TP TP+ P P PTATPTA PTATPT PT T PT T TA PT++PT PTA PT PT TPT PTA PTA PT+ PT PT PT PTA PT P+A PT+ P Sbjct: 29 PSASPIVTPEPTPSAAPQPSATPTATPTPTPTQTAKPSASPIVTPAPTPSAAPQPSAKPTATPTAKPTATPTAKPTATPTVKPTATPTAKPTATPTVKPTATPTVKPTATPTVKPTATPTAKPTATPTVKPTATPTVKPTATPTVKPTATPTVKP 183 HSP 5 Score: 70.0922 bits (170), Expect = 1.435e-9 Identity = 49/89 (55.06%), Postives = 57/89 (64.04%), Query Frame = 0 Query: 43 PTSIPSATPTTTPSASPTASPTATPSAAPTNTPTNTPTATPTAKPSATPTTTPTPSPIGLPTATPTATPTATPTDVPTGASTATPTGTS 131 PT+ P+ PT TP+A PTA+PT P+A PT PT TPT PTA P+ PT TPT P PT PTATPT PT PT TATP+G + Sbjct: 135 PTATPTVKPTATPTAKPTATPTVKPTATPTVKPTATPTVKPTATPTVKPTATPTVKPTATPTVKPTATPTVKPTATPTAKPTATPSGNA 223
BLAST of EWM21985.1 vs. NCBI_GenBank
Match: gi|585104552|gb|EWM23483.1| (putative lipase, partial [Nannochloropsis gaditana]) HSP 1 Score: 78.5666 bits (192), Expect = 2.103e-12 Identity = 56/95 (58.95%), Postives = 66/95 (69.47%), Query Frame = 0 Query: 92 TTTPTPSPIGLPTATPTATPTATPTDVPTGASTATPTGTSTASPTSSPTALPTAMPTALPTNTPTASPTAIPTAIPTSPPTTTPTRNPTKTPTAV 186 T++PT P +PT PT TPTA+PT PT + T PT T TA+PT SPTA+PTA PTA+PT T PTA+PTA PT PT TPT PT TPTA+ Sbjct: 294 TSSPTSFPTAMPTKLPTGTPTASPTGKPTASPTGMPTATLTAAPTVSPTAIPTATPTAMPTVT----PTAMPTATPTMSPTATPTAMPTATPTAM 384 HSP 2 Score: 74.3294 bits (181), Expect = 4.048e-11 Identity = 62/111 (55.86%), Postives = 73/111 (65.77%), Query Frame = 0 Query: 30 FDSPPSPAPVTDSPTSIPSATPTTTPSASPTASPTATPSAAPTNTPTNTPTATPTAKPSATPTTTPTPSPIGLPTATPTATPTATPTDVPTGASTATPTGTSTASPTSSPT 140 F+ + P T SPTS P+A PT P+ +PTASPT P+A+PT PT T TA PT P+A PT TPT P PTA PTATPT +PT PT TATPT TA+PT+SPT Sbjct: 284 FNVYEALLPKTSSPTSFPTAMPTKLPTGTPTASPTGKPTASPTGMPTATLTAAPTVSPTAIPTATPTAMPTVTPTAMPTATPTMSPTATPTAMPTATPTAMPTAAPTTSPT 394 The following BLAST results are available for this feature:
BLAST of EWM21985.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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