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Properties
| Property Name | Value |
|---|
| Product | nudix hydrolase |
| Orig transcript id | gnl|cribi|Naga_100670g2.7116.mrna |
| Orig protein id | gnl|cribi|Naga_100670g2.7116 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:638445..640802 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8710 ID=rna8710|Name=rna8710|organism=Nannochloropsis gaditana|type=mRNA|length=1391bp
GCTCGCGCGGCCTTACTCCACAAAGTGTCACGAAAAGCAGCAAACCTTTG
TCATTTGCTTGCTCGCCTCACAAGCGATCTTGCTCAACGTTCCTTATCCG
TGGCATTTCATCCCAGGAAAGTTGTAGCGGTTGTGACCATGTCATTACTC
TCGTCACGATCATTACGATGGCCGGTCTCCTCAAGGGCCTTGGTCTTCTG
TCTGGTCCTGATATTTTGGGCCGACACCATTGCCTACGTGCTTCCTCTTC
TCCGAACACTCGGGACCTCGACACGATCTCCCCCACAAAAAGCGCGGCTT
AATATGGCTACTCCTATACATCGTCCACAGAAAATTGCTCTACGGTCATG
TTTTGGATCAGGTTATCCGCCACGATCTCCAAGAATTCCTACCCTTCCAA
CCTCTGCTCCACGTGCATCCATCAGGCGTTTCAGCTCGATGCTTGCCTCA
TCCTTCATCCCTGCTTTCCTCCGTCGAAGGGGGGGAACGACAGCCAACCC
TCCTCCGGCCATCAGGCCATCTACGTCCCCCCCTCCTTCCTCCCCTCCCT
CCCTTGATGCCTCTCGCCAGCCCACGACCCCTCACGACCTTCAATGGGCC
GCTTTTGCAGGACCTTCAGACTCTCCTACCCGCCTGCGTAAACGAGACCT
GGCCATTGGGGGAGTGCTTTCCGTGCTGGCGACGGTTGCGGCCGTTTCCG
TGCCGTTAGGGTACGGGGGGGTCGTGAACGTCCTGTTGCTGCCTGCTGAA
ACGCCGCTGCTGGAAAGAAAAATGGCCTTTACCAAGGCCTTGCGTCTGCT
GGCATGCATCTACTCGGCGGAACCCTTTTTGACGTGGGTATACATCCGGC
ACATGACCGGATTGTTTTCCAAGGGCGTACTGAACCTCAAGAACGCTGTC
TTTACCAGGCTTTTGGAGCAGGACGTCGCCTTCTTCGACCGGGCAGGGCC
TGGGGAGATAACATCCTACCTGTCCCAAGACATCAGCGGGCTCAAAGATA
TACTGTACGGGAACCTGCAGAGAGACCGGGGTCTGCGCGCGCTCTTGGAG
GCAGTGGTGGGGACGATCCTCCTCTTCAAACTTCAACCCCGCCTTGGCCT
CGTCTTCTCCCTCGTGATCCCGACCGTGGCGACCATCACGGTGAGCATTC
CATCGGCGTGAACGGGCCCTGGGAGGCACAGAGGGGTCCGTGGAGGGATG
GGTGGCGCACTTGATATATATATATTTATGGAGTTCTCGGACATATATGT
ATCGGCATCGCAACCTTGCCAACCTTGCCTTTCGTTTCCTTCCTCCTCTC
CTAGCACCTGTCCTTGTTCTGTGGGGGAAGGCGTGTCCAACAAACAAGCA
ACCATACTACTAACCCCATTCCCCCCGCCTTCCCACCCTCC back to topprotein sequence of rna8710 >rna8710-protein ID=rna8710-protein|Name=rna8710|organism=Nannochloropsis gaditana|type=polypeptide|length=179bp
MSLSADEIVDIVDESNQVLRQERREIMRKERLLHRSTYIFARNSQGEYYV
QKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKH
LFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEA
GDKFTPDSLYATRKYLDFLREKGEKSNGN back to topmRNA from alignment at KK037249.1:638445..640802- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8710 ID=rna8710|Name=rna8710|organism=Nannochloropsis gaditana|type=mRNA|length=2358bp|location=Sequence derived from alignment at KK037249.1:638445..640802- (Nannochloropsis gaditana)
GGGAGAAAAAGACGTGGCGGACGACCCCATCTTGGTGGATTCAGCGTCCA
TATCCATGAGGAATGCGTAGCCACTTTGTTGATAGAACTGATGATGTGAC
CCGAAAAAGGAATGGGAGGAAAAGAAGGAAAACCATGGAGAATGGTTTCG
ACGTGGTCAACGTCATGGAAGGCATCAGTCGTGTCCCATTCAGTGTCAAT
TAAAAAAAAAGCCAGATGGCCTCGCACCTTGCATCAAGGTACTCAAATTG
TTAAGTTGTACCAATCTTGACTTTATACCAGCGGAAATGGTTTGATTGAC
TGGCTACGCCGTAAAAATAAATGGCGTCGGAAGGAGAAGGAGGAGAGATT
GGGAACCGGGAGGGACAAGAGGAAAGGGTTAAAATACCCTTCCAAAAAAA
AGAAACGAGGCGCCACATTGTTGATATCCAGGTGACATATACCTGGTGAG
GATTATATTTTAAAAAGATATTGTGTCTCATAGATCGCATCCGCGTACTG
AATTGCTGTGTCAGAAATGTAAGTTTTTCGTTCATCTCAAGTAGATAAAG
CGGACCTACTTCAAAGATAACAATTTCGTCCACGACTGTCTTTTCAGGAC
AATCAATAGGGGCGCAAGGTCTCAACAAATGAATCCACTGTATGTTTACG
CTCAGTTTTGCGTAGTGCGCACCCAGTTGGGTGTTTGATGTACAAAATGG
AATGGTTAACCGTGTCGTCGCACCGCCTCAGTCTCGCACAGGCGTCGCCG
ACCAAATTTTCCCACAATAAAATCCTCGTGCACATCGCGGCAAATCTCGA
GCACTGTCAACAACATGTCTCTCTCCGCGGACGAAATTGTAAGTGCTACG
CTCCTTTTCCCCTGTCCCATCTATCTGATTTTTTTATTTGGCGACCTTGC
AGACTGCTGCGACACCCCCCCCCCTTGTATCAATGGAACTTCTTTCCATG
ATATAGAAAGACTTCTAATATTTTTGGTATTTCAGATGATATTTGTCCCG
CTTCCGCTTGTCATGCATGTCTCGGAGACCGTTTCTCTTAAACTTGTGCA
TTTTTGTTTGCTAACCTCACGAGTTATGTCTTGAATGGTCCGATCAGGTC
GACATTGTTGACGAAAGCAATCAAGTATTGCGCCAAGAGCGTCGGGAAAT
CATGGTACGTCGTCGAGGCCGGAATAATTTTTTGTGCACTGCCAACGCCG
ACAATCATCGATCTTAGTCATGGGTGTGCCACGTCGCCGCTCCCTTGGGC
CCATGACACCTCAGACACCTGTACCATGCTTTGCTTCCATCTTTTCCCTC
ATCTTCGTGCCTGCCAATCTTTCCTTTCATCTCCACAGCGCAAAGAACGG
CTGTTGCACCGTTCTACTTATATTTTTGCGCGAAACAGCCAGGGAGAGTA
CTATGTGCAGAAACGAACCATGCTCAAGGACTACTGTCCTGGGTACTACG
AGGTGGTGGCCGGTGGAGTGGTGGGGGTAAGGCAGGAGGGAGGGAGGGAG
AGGGGTGGAGGGGCGGACCAAGGGAGGGCAGGTGGCGGGGACGGTTCAGG
AAGCAGGAGAAGGCAAAAGCAAAACGTTCAGGAAGCAGGAGAAGGCAAAA
GCAAATCATGATGCGGGGGACAGGTGTCATCTTACGCAACGACCAAGGGC
GGCCACATCAACTCTCTCCTCTCACCCCTGTCCTTCCTTTCCTCTTTTCC
CCGTCCCCGCTCCCTCCTCCTCCCCCTTCTCCTCCTCCCGTACGCAGGCA
GGCGAAACCTACGCCGAGAATGCCGATCGAGAGGCGGAGGAAGAGCTGGG
CATTCCACCTTCTGCGGGAAAAAAGCATTTGTTCACTTTCTTGTACCAAG
ATGAGCGAATTCGTGTCTTTGGTGACGCCTGGGAAGTAGTGTGGGACGGA
GCTTTGACATTGCAAAAGGTAAGGAGAGAGGGCGGAGGGTACCCACGGGG
AGGGGGAATCGGGGCAAGGACGTCGACCAACGTCCCACAGGTTCCGAGCT
TCGCATTCAGGTGAATTTTGTCCTCGTTCCTGCCTTGATTATGCTCGTCT
CCTTTCTTTATTGGCCCTTTAACCCCCAGGAGGAAGTCGAAAGCGTGCAT
CCCATGACGCTTGAGGAAGTTTTTATTCGGGTCGAGGTATGGCCTACCCT
GTCTCTTGACCAAATTTTCCCATCTTTTTGCATTCTTGTTCGTCCTTCCT
GCCGTTTCCATCGATTTTCCAGATTCTTTTCTCACCTCTCTGCCCATTGT
CCGCTTCTGGAATAGGCTGGAGACAAGTTCACGCCCGATTCGCTGTATGC
GACCCGGAAGTATCTTGACTTTTTGCGCGAAAAGGGAGAAAAGTCAAACG
GAAATTGA back to topCoding sequence (CDS) from alignment at KK037249.1:638445..640802- >rna8710 ID=rna8710|Name=rna8710|organism=Nannochloropsis gaditana|type=CDS|length=3240bp|location=Sequence derived from alignment at KK037249.1:638445..640802- (Nannochloropsis gaditana)
GCTGGAGACAAGTTCACGCCCGATTCGCTGTATGCGACCCGGAAGTATCT
TGACTTTTTGCGCGAAAAGGGAGAAAAGTCAAACGGAAATTGAGAGGAAG
TCGAAAGCGTGCATCCCATGACGCTTGAGGAAGTTTTTATTCGGGTCGAG
GCAGGCGAAACCTACGCCGAGAATGCCGATCGAGAGGCGGAGGAAGAGCT
GGGCATTCCACCTTCTGCGGGAAAAAAGCATTTGTTCACTTTCTTGTACC
AAGATGAGCGAATTCGTGTCTTTGGTGACGCCTGGGAAGTAGTGTGGGAC
GGAGCTTTGACATTGCAAAAGCGCAAAGAACGGCTGTTGCACCGTTCTAC
TTATATTTTTGCGCGAAACAGCCAGGGAGAGTACTATGTGCAGAAACGAA
CCATGCTCAAGGACTACTGTCCTGGGTACTACGAGGTGGTGGCCGGTGGA
GTGGTGGGGGTCGACATTGTTGACGAAAGCAATCAAGTATTGCGCCAAGA
GCGTCGGGAAATCATGATGTCTCTCTCCGCGGACGAAATTGCTGGAGACA
AGTTCACGCCCGATTCGCTGTATGCGACCCGGAAGTATCTTGACTTTTTG
CGCGAAAAGGGAGAAAAGTCAAACGGAAATTGAGAGGAAGTCGAAAGCGT
GCATCCCATGACGCTTGAGGAAGTTTTTATTCGGGTCGAGGCAGGCGAAA
CCTACGCCGAGAATGCCGATCGAGAGGCGGAGGAAGAGCTGGGCATTCCA
CCTTCTGCGGGAAAAAAGCATTTGTTCACTTTCTTGTACCAAGATGAGCG
AATTCGTGTCTTTGGTGACGCCTGGGAAGTAGTGTGGGACGGAGCTTTGA
CATTGCAAAAGCGCAAAGAACGGCTGTTGCACCGTTCTACTTATATTTTT
GCGCGAAACAGCCAGGGAGAGTACTATGTGCAGAAACGAACCATGCTCAA
GGACTACTGTCCTGGGTACTACGAGGTGGTGGCCGGTGGAGTGGTGGGGG
TCGACATTGTTGACGAAAGCAATCAAGTATTGCGCCAAGAGCGTCGGGAA
ATCATGATGTCTCTCTCCGCGGACGAAATTGCTGGAGACAAGTTCACGCC
CGATTCGCTGTATGCGACCCGGAAGTATCTTGACTTTTTGCGCGAAAAGG
GAGAAAAGTCAAACGGAAATTGAGAGGAAGTCGAAAGCGTGCATCCCATG
ACGCTTGAGGAAGTTTTTATTCGGGTCGAGGCAGGCGAAACCTACGCCGA
GAATGCCGATCGAGAGGCGGAGGAAGAGCTGGGCATTCCACCTTCTGCGG
GAAAAAAGCATTTGTTCACTTTCTTGTACCAAGATGAGCGAATTCGTGTC
TTTGGTGACGCCTGGGAAGTAGTGTGGGACGGAGCTTTGACATTGCAAAA
GCGCAAAGAACGGCTGTTGCACCGTTCTACTTATATTTTTGCGCGAAACA
GCCAGGGAGAGTACTATGTGCAGAAACGAACCATGCTCAAGGACTACTGT
CCTGGGTACTACGAGGTGGTGGCCGGTGGAGTGGTGGGGGTCGACATTGT
TGACGAAAGCAATCAAGTATTGCGCCAAGAGCGTCGGGAAATCATGATGT
CTCTCTCCGCGGACGAAATTGCTGGAGACAAGTTCACGCCCGATTCGCTG
TATGCGACCCGGAAGTATCTTGACTTTTTGCGCGAAAAGGGAGAAAAGTC
AAACGGAAATTGAGAGGAAGTCGAAAGCGTGCATCCCATGACGCTTGAGG
AAGTTTTTATTCGGGTCGAGGCAGGCGAAACCTACGCCGAGAATGCCGAT
CGAGAGGCGGAGGAAGAGCTGGGCATTCCACCTTCTGCGGGAAAAAAGCA
TTTGTTCACTTTCTTGTACCAAGATGAGCGAATTCGTGTCTTTGGTGACG
CCTGGGAAGTAGTGTGGGACGGAGCTTTGACATTGCAAAAGCGCAAAGAA
CGGCTGTTGCACCGTTCTACTTATATTTTTGCGCGAAACAGCCAGGGAGA
GTACTATGTGCAGAAACGAACCATGCTCAAGGACTACTGTCCTGGGTACT
ACGAGGTGGTGGCCGGTGGAGTGGTGGGGGTCGACATTGTTGACGAAAGC
AATCAAGTATTGCGCCAAGAGCGTCGGGAAATCATGATGTCTCTCTCCGC
GGACGAAATTGCTGGAGACAAGTTCACGCCCGATTCGCTGTATGCGACCC
GGAAGTATCTTGACTTTTTGCGCGAAAAGGGAGAAAAGTCAAACGGAAAT
TGAGAGGAAGTCGAAAGCGTGCATCCCATGACGCTTGAGGAAGTTTTTAT
TCGGGTCGAGGCAGGCGAAACCTACGCCGAGAATGCCGATCGAGAGGCGG
AGGAAGAGCTGGGCATTCCACCTTCTGCGGGAAAAAAGCATTTGTTCACT
TTCTTGTACCAAGATGAGCGAATTCGTGTCTTTGGTGACGCCTGGGAAGT
AGTGTGGGACGGAGCTTTGACATTGCAAAAGCGCAAAGAACGGCTGTTGC
ACCGTTCTACTTATATTTTTGCGCGAAACAGCCAGGGAGAGTACTATGTG
CAGAAACGAACCATGCTCAAGGACTACTGTCCTGGGTACTACGAGGTGGT
GGCCGGTGGAGTGGTGGGGGTCGACATTGTTGACGAAAGCAATCAAGTAT
TGCGCCAAGAGCGTCGGGAAATCATGATGTCTCTCTCCGCGGACGAAATT
GCTGGAGACAAGTTCACGCCCGATTCGCTGTATGCGACCCGGAAGTATCT
TGACTTTTTGCGCGAAAAGGGAGAAAAGTCAAACGGAAATTGAGAGGAAG
TCGAAAGCGTGCATCCCATGACGCTTGAGGAAGTTTTTATTCGGGTCGAG
GCAGGCGAAACCTACGCCGAGAATGCCGATCGAGAGGCGGAGGAAGAGCT
GGGCATTCCACCTTCTGCGGGAAAAAAGCATTTGTTCACTTTCTTGTACC
AAGATGAGCGAATTCGTGTCTTTGGTGACGCCTGGGAAGTAGTGTGGGAC
GGAGCTTTGACATTGCAAAAGCGCAAAGAACGGCTGTTGCACCGTTCTAC
TTATATTTTTGCGCGAAACAGCCAGGGAGAGTACTATGTGCAGAAACGAA
CCATGCTCAAGGACTACTGTCCTGGGTACTACGAGGTGGTGGCCGGTGGA
GTGGTGGGGGTCGACATTGTTGACGAAAGCAATCAAGTATTGCGCCAAGA
GCGTCGGGAAATCATGATGTCTCTCTCCGCGGACGAAATT back to top
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