rna8707, rna8707 (mRNA) Nannochloropsis gaditana

Overview
Namerna8707
Unique Namerna8707
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1003
Alignment locationKK037249.1:633993..634335 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101701g2.9414.mrna
Orig protein idgnl|cribi|Naga_101701g2.9414
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:633993..634335 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101701g2gene8440Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8707rna8707-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21995.1cds8678Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8707 ID=rna8707|Name=rna8707|organism=Nannochloropsis gaditana|type=mRNA|length=1003bp
GGCGCACCATGCACAATTAAAAAAGTAGGGTTACACGTACAAGACAATGT
CAAGGCACGTCTTCCAAGCCACACATGCGTTATTCCCACGCGTGCCATTC
TAGGGCCTCCCTCATCTCACGGAAGCACCAGGGTCGTGGCGTAAGGTTTT
GATCGAGAAATGAGATCTCGCCCCATCGATTATAGCAAATGGGACCATCT
TGATACCTCCGACGACGAAGACGAGGAAGAAAAACGAGGGCCACCGCGCG
TCACGCACTTCAATGAGCCCATGTCGGTCACTGTGGGCGGACATGACCAT
CTAATCCCCTCCAGGTCGCCGGCGCCTTCCCCCTCCTCCACCACACCACA
TCCTGCCAGCCGTATCGAAGACATTAGCGAAAACGGACAATCCTTCCCAA
CTTTTACCTGGCGGCAAGACAGAGGGGAAGCAATCATGCACATCTGGGCC
CCGCCCTGCACACGCGCCAAGGACGTGCAGGTCACGTACACCCGGGACAC
CAATCATTTGTCGGTGCGCATCACCACCCCGACGGCGGTGCCTGTGCTTG
TAGAAGGCCCATTGGCCAACCCCATCCAACTGGAGGAAGGGGAGGAAGTG
GAGTGGGAAATGGTGGGGGAGGGAGGGCGGGAAGGAGGGCGGGGGGGAGG
AAGGGCAGTGCGGGTAAGCCTGATTAAATCTACGCCGAGACCTGATATGG
TGCATTGGTGGTCACGAGTATTTGTGGGAGACGATGAGATCGACACGAGT
CGAATCGCTGGGCGCAAGATGAATTTTCAGGGGGCGTGGGAGGAGGCCCA
ACGGCGGTTTCGGGAGGACGTGGCACGTCGGAACGCGCAGGGGCCGGTGG
AGGTCGAGGTCGAGGGCGAGGTCGAGGGCGAGGGCGAGGGCGGGGGGAAG
TTGAAGAGAGAGGGATGAAAATCTGGAGCGTGATGAACGATGGAACACAT
TTAAAAAGATGTCGCAAGCGAAAGCGAAACAAAAACTTTTTCCTCCCCCG
GAC
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protein sequence of rna8707

>rna8707-protein ID=rna8707-protein|Name=rna8707|organism=Nannochloropsis gaditana|type=polypeptide|length=96bp
MSGVVPVEWGGAIAPSPSDGSSASFIHQGKPTSRRLTQVLALATSSLPSH
PVEGGFGIGSGNGPSREHQVSRRIDQTSPCSMHACREIQEGNGLRP
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mRNA from alignment at KK037249.1:633993..634335+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8707 ID=rna8707|Name=rna8707|organism=Nannochloropsis gaditana|type=mRNA|length=343bp|location=Sequence derived from alignment at KK037249.1:633993..634335+ (Nannochloropsis gaditana)
ATGTCCGGTGTTGTCCCTGtggagtggggaggggccatagcgccctcccc
ctctgatGGATCCAGCGCAAGCTTTATCCATCAGGGAAAACCTACAAGCC
GGAGGCTGACGCAGGTGTTGGCCTTGGCAAGTATGGCAGTGGTTGCGTCG
GGCACATTCGCCGCGAACGGAAAAGAGCCCagcttcctcgctcccgtccc
ACCCAGTGGAAGGAGGCTTCGGCATAGGCTCAGGCAACGGCCCCAGCAGA
GAACACCAAGTGAGCCGCCGCATCGACCAAACATCGCCGTGCTCCATGCA
CGCATGTCGGGAGATTCAGGAGGGCAatggcctccgtccctga
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Coding sequence (CDS) from alignment at KK037249.1:633993..634335+

>rna8707 ID=rna8707|Name=rna8707|organism=Nannochloropsis gaditana|type=CDS|length=582bp|location=Sequence derived from alignment at KK037249.1:633993..634335+ (Nannochloropsis gaditana)
ATGTCCGGTGTTGTCCCTGtggagtggggaggggccatagcgccctcccc
ctctgatGGATCCAGCGCAAGCTTTATCCATCAGGGAAAACCTACAAGCC
GGAGGCTGACGCAGGTGTTGGCCTTGGCAActtcctcgctcccgtcccAC
CCAGTGGAAGGAGGCTTCGGCATAGGCTCAGGCAACGGCCCCAGCAGAGA
ACACCAAGTGAGCCGCCGCATCGACCAAACATCGCCGTGCTCCATGCACG
CATGTCGGGAGATTCAGGAGGGCAatggcctccgtccctgaATGTCCGGT
GTTGTCCCTGtggagtggggaggggccatagcgccctccccctctgatGG
ATCCAGCGCAAGCTTTATCCATCAGGGAAAACCTACAAGCCGGAGGCTGA
CGCAGGTGTTGGCCTTGGCAActtcctcgctcccgtcccACCCAGTGGAA
GGAGGCTTCGGCATAGGCTCAGGCAACGGCCCCAGCAGAGAACACCAAGT
GAGCCGCCGCATCGACCAAACATCGCCGTGCTCCATGCACGCATGTCGGG
AGATTCAGGAGGGCAatggcctccgtccctga
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Synonyms
Publications