EWM22048.1, cds8646 (CDS) Nannochloropsis gaditana

Overview
NameEWM22048.1
Unique Namecds8646
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:566050..566196 -
Alignment locationKK037249.1:565605..565935 -
Alignment locationKK037249.1:564920..565386 -
Alignment locationKK037249.1:564232..564789 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22048.1
Productanaphase-promoting complex subunit 1
Orig transcript idgnl|cribi|Naga_100052g39.1173.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:566050..566196 -
KK037249.1supercontigKK037249.1:565605..565935 -
KK037249.1supercontigKK037249.1:564920..565386 -
KK037249.1supercontigKK037249.1:564232..564789 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005680anaphase-promoting complex
Vocabulary: INTERPRO
TermDefinition
IPR024990Apc1
Homology
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|585102463|gb|EWM22048.1| (anaphase-promoting complex subunit 1 [Nannochloropsis gaditana])

HSP 1 Score: 996.497 bits (2575), Expect = 0.000e+0
Identity = 500/500 (100.00%), Postives = 500/500 (100.00%), Query Frame = 0
Query:    1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRLERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVLPTMDPVAAACTTCNLRLVLRYFSPEARLRGRLRGKQGREERERRGDDPVCSRTGGREEEGGTEDWLLQADLVQSLRVRMDALFVSLGLGEEVMAEMGVTGHAESIESLAGVDSSSVGSKPLCGAYALYYDLPCAAASHPFAVGFPPTGPVGQGWEQQRRAAMRELPALRARAPHAALSDLLRGLGSAARWRDGQEW 500
            MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRLERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVLPTMDPVAAACTTCNLRLVLRYFSPEARLRGRLRGKQGREERERRGDDPVCSRTGGREEEGGTEDWLLQADLVQSLRVRMDALFVSLGLGEEVMAEMGVTGHAESIESLAGVDSSSVGSKPLCGAYALYYDLPCAAASHPFAVGFPPTGPVGQGWEQQRRAAMRELPALRARAPHAALSDLLRGLGSAARWRDGQEW
Sbjct:    1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRLERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVLPTMDPVAAACTTCNLRLVLRYFSPEARLRGRLRGKQGREERERRGDDPVCSRTGGREEEGGTEDWLLQADLVQSLRVRMDALFVSLGLGEEVMAEMGVTGHAESIESLAGVDSSSVGSKPLCGAYALYYDLPCAAASHPFAVGFPPTGPVGQGWEQQRRAAMRELPALRARAPHAALSDLLRGLGSAARWRDGQEW 500          
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|762159466|ref|XP_011417930.1| (PREDICTED: anaphase-promoting complex subunit 1 isoform X2 [Crassostrea gigas])

HSP 1 Score: 161.384 bits (407), Expect = 2.104e-39
Identity = 98/307 (31.92%), Postives = 148/307 (48.21%), Query Frame = 0
Query:    1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRD-----GRLERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQ 302
            MA+ M++G LFLGGGR  L  +  A+  ++ A +P+ P H++DN+Y LQA RHLYVLA   R V  RD ++GE  +VPLE++++D     G + R  AP LLPELD + EV    PRY+P++F +       +      +   ++ G          + VK++ G+LSY  DP+  RS+L +   +DH S HT       S   ++I AFT DP + + A +F  G     R                                          R  +  + +LY C+T+EKP+++  H  L  VL 
Sbjct:  263 MAISMSVGLLFLGGGRYSLSTTPEAIGIMLCAFFPKFPFHSNDNRYHLQAFRHLYVLATEARVVLPRDVDSGEPCYVPLEIRFKDTADYCGEVFRTSAPTLLPELDKIEEVKILGPRYWPITFHI-------DKNWSTLKLLLKKNGI---------LFVKQRAGYLSYVLDPKGYRSVLAKSLTSDH-SSHT-------SVKPDVIKAFTTDPVISSMADYFLMGKDDCQR-----------------------------------------NRTLQKLSSILYSCVTQEKPEVISTHLRLDQVLN 504          
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|676394023|ref|XP_009040289.1| (hypothetical protein AURANDRAFT_38761 [Aureococcus anophagefferens] >gi|323449043|gb|EGB04934.1| hypothetical protein AURANDRAFT_38761 [Aureococcus anophagefferens])

HSP 1 Score: 159.073 bits (401), Expect = 4.620e-38
Identity = 130/385 (33.77%), Postives = 175/385 (45.45%), Query Frame = 0
Query:    1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYR-----------DG----RLERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDA---FPSSSP-----------SELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVLPTMDPVAAACTTCNLRLVLRYFS-PEARLRGRLRGKQGREERERRGDDPVCS 355
            MALHM+IG LFLGGGRA L RS  ++AAL+ A YPR P    DNQY LQ +RHL+VLAV  RG++A D ETG+   VPL+V+ R           DG    +  R +APCLLP L  +  +   S RYYP +              +N R              +  I VKR+PG+LSY +DP ALR  L R   A     +  G      P + P           S+++A++T+DP LL FAR FC                    P  G  +             P    PS +Q   R CA +L+EC+  +KP +L+L+  L H      T+     +    +LR+ L ++S     L   L  +   E      D  VCS
Sbjct:  511 MALHMSIGLLFLGGGRASLFRSKESIAALLTAFYPRFPRSPEDNQYHLQPLRHLWVLAVDWRGIKAVDVETGKDAPVPLQVELRSLADYVTIRVADGWSTTQSIRIMAPCLLPPLSDIISIRVASERYYPAALDT-----------QNERHAAALS--------KLLIYVKRRPGYLSYMRDPYALRERL-REEEAFRDKEYGHGSVRVLAPWARPLQSCPETGLETSDILASYTDDPILLTFARQFC----------------DHFDPHTGGEMKQAQIWGGGAYGGPLGGAPSHIQ---RWCARILHECVAYDKPMVLLLYMQLHHAAL---TIHWAKHSHHAWSLRMTLEFYSRASHHLDLTLLRRDFLEALRVHADAVVCS 853          
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|1016699428|ref|XP_016071685.1| (PREDICTED: anaphase-promoting complex subunit 1 [Miniopterus natalensis] >gi|1016699432|ref|XP_016071686.1| PREDICTED: anaphase-promoting complex subunit 1 [Miniopterus natalensis])

HSP 1 Score: 157.918 bits (398), Expect = 1.938e-37
Identity = 107/332 (32.23%), Postives = 162/332 (48.80%), Query Frame = 0
Query:    1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRL-----ERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVLPTMDPVAAACTTCNLRLVLRYFS 327
            +A HMA+G LFLGGGR  L  S+S++AAL+ ALYP  PAH++DN+Y LQA+RHLYVLA   R +   D +T    +  LEV Y+  +      E  +AP LLPEL LL ++  + PRY+ L   +         G ++ +    + G          + VK + G LSY +DP   +SLL +       +R+++  AF      E I+AFT DP LL+FA +FC     +G+K                                        Q    L + VLYEC+T+E P++L  + ++   ++ L   + ++       ++LVL +FS
Sbjct: 1555 LAHHMALGILFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLLVPVDVDTNTPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLIDLSK-------GTQHLKSILSKDGV---------LYVKLRAGQLSYKEDPMGWQSLLAQTVA----NRNSEARAF----KPETISAFTSDPALLSFAEYFCKPTVNMGQK----------------------------------------QEILDLFSSVLYECVTQETPEMLPAYIAMDQAVRRLGRRE-MSETSELWQIKLVLEFFS 1821          
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|857975716|emb|CEO98220.1| (hypothetical protein PBRA_006333 [Plasmodiophora brassicae])

HSP 1 Score: 152.14 bits (383), Expect = 1.649e-35
Identity = 104/305 (34.10%), Postives = 140/305 (45.90%), Query Frame = 0
Query:    1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRLERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPF-GADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVL 304
            MALHM+IG LFLGGGR+ L  S  A+AALV AL+PR P  T+DN+  +QA RHLYVLAV  R +E RD + G   +VPL V+   G     +APCLLP  D +  +   SPR++PL   +       +G   ++    + G   MF        VKRK GHL Y QDP   R +L R F    H S         +      + +F  D  L+ FA+ FC                       G P    ST                          VL+ECLTR+ PD++  +F++  ++  L
Sbjct: 1194 MALHMSIGLLFLGGGRSSLSTSSPAIAALVIALFPRFPMSTTDNRDHVQAFRHLYVLAVEPRYLETRDVDNGRPCYVPLVVQLSHGEQRNIIAPCLLPSPDTVESIRVESPRFWPLVLDL-------KGSDAHKSLIVQNG--VMF--------VKRKTGHLPYRQDPLGRRGILSRSFPRLTHLSSGKQSQRRAAVHREAFVESFAADSVLVEFAKDFC---------------------GEGTPSGEFST-------------------------AVLFECLTRDTPDMIPTYFAVYEIVNDL 1435          
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|1207918571|ref|XP_021348141.1| (anaphase-promoting complex subunit 1-like [Mizuhopecten yessoensis])

HSP 1 Score: 149.443 bits (376), Expect = 3.960e-35
Identity = 111/352 (31.53%), Postives = 167/352 (47.44%), Query Frame = 0
Query:    1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRLERRV-----APCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVLPTMDPVAAACTTCNLRLVLRYFSPEARLRGRLRGKQGREERER 347
            MA+ M++G LFLGGGR  L  +   +A ++ A YP+ P H++DN+Y LQA+RHLYV+A   R V  RD +TG   +VP+EVK++D  +   +     APCLLPELD++ EV    PRY+P++F +            N +   +  G          + VK++ GHLSY +DP+  RS+L +   +DH S         SS   +++ AFT DP LLA   +F      +  K M                                     LQ    + + ++YEC+T+EKP+ +    S + + Q L            C L+LVL Y+      R  L  K+G +  E+
Sbjct:  275 MAISMSLGLLFLGGGRYSLKTTSDCIAVMLCAFYPKFPIHSNDNRYHLQALRHLYVMAADPRLVLPRDVDTGHPCYVPMEVKFKDTDVYSNISFSTSAPCLLPELDVIEEVKITGPRYWPIAFHLNKNWN-------NLQLVLQNNGT---------LYVKQRAGHLSYVEDPKGYRSMLAKSLTSDHSSH--------SSVKPDVVKAFTSDPRLLALTEYF------LNTKNMKD--------------------------------VDFLQ----ILSSIVYECVTKEKPESIP---SYVDLHQSLERGQFGMRTEGVCQLKLVLSYYGS----RFCLVDKEGTKSSEQ 553          
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|632952941|ref|XP_007892129.1| (PREDICTED: anaphase-promoting complex subunit 1 isoform X2 [Callorhinchus milii])

HSP 1 Score: 145.206 bits (365), Expect = 3.676e-33
Identity = 105/299 (35.12%), Postives = 147/299 (49.16%), Query Frame = 0
Query:    1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRL-----ERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQ---ICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLL 291
            MA HMA+G LFLGGGR  LC S+SA+AAL+ ALYPR PAH+SDN+Y LQA+RHLYVLA   R +   D +T    +  + V Y+  +         +AP LLPEL LL E+  + P+Y+ +   +                     GP+  +    +   + VK + GHLSY +DP+  RSLL + F   HR+       F S  P E ++AFT DP LL+FA +FC   +  G+K                                        +    L + +LYEC+T+EKP++L
Sbjct: 1605 MATHMALGLLFLGGGRYSLCTSNSAIAALLCALYPRFPAHSSDNRYHLQALRHLYVLATEPRLLVPIDVDTNTPCYALINVAYKASQWCEEMTVNLMAPTLLPELHLLKEIKVKGPKYWEIMMDLSK-------------------GPQSLQAILSKDGFLYVKLRAGHLSYTEDPKGFRSLLAQTFT--HRN-----PEFLSVKP-EAVSAFTSDPALLSFAEYFCKQSNENGQK----------------------------------------KEMLDLFSSILYECVTQEKPEML 1836          
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|632952939|ref|XP_007892127.1| (PREDICTED: anaphase-promoting complex subunit 1 isoform X1 [Callorhinchus milii])

HSP 1 Score: 145.206 bits (365), Expect = 3.676e-33
Identity = 105/299 (35.12%), Postives = 147/299 (49.16%), Query Frame = 0
Query:    1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRL-----ERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQ---ICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLL 291
            MA HMA+G LFLGGGR  LC S+SA+AAL+ ALYPR PAH+SDN+Y LQA+RHLYVLA   R +   D +T    +  + V Y+  +         +AP LLPEL LL E+  + P+Y+ +   +                     GP+  +    +   + VK + GHLSY +DP+  RSLL + F   HR+       F S  P E ++AFT DP LL+FA +FC   +  G+K                                        +    L + +LYEC+T+EKP++L
Sbjct: 1606 MATHMALGLLFLGGGRYSLCTSNSAIAALLCALYPRFPAHSSDNRYHLQALRHLYVLATEPRLLVPIDVDTNTPCYALINVAYKASQWCEEMTVNLMAPTLLPELHLLKEIKVKGPKYWEIMMDLSK-------------------GPQSLQAILSKDGFLYVKLRAGHLSYTEDPKGFRSLLAQTFT--HRN-----PEFLSVKP-EAVSAFTSDPALLSFAEYFCKQSNENGQK----------------------------------------KEMLDLFSSILYECVTQEKPEML 1837          
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|1160117214|ref|XP_020384856.1| (anaphase-promoting complex subunit 1-like [Rhincodon typus])

HSP 1 Score: 143.28 bits (360), Expect = 5.107e-33
Identity = 107/332 (32.23%), Postives = 164/332 (49.40%), Query Frame = 0
Query:    1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRL-----ERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVLPTMDPVAAACTTCNLRLVLRYFS 327
            MA HMA+G LFLGGGR  LC S+SA+AAL+ ALYPR PAH++DN+Y LQA+RHLYVLA   R +   D +T    +  ++V Y+  +         +AP LLPEL LL E+  + P+Y+ +   +         G  + +    + G          + VK + GHLSY +DP+  RSLL + F   HR+       F S  P E ++AFT DP LL+FA +FC      G++ +                                           L + +LYEC+T+EKP++L  + ++   ++ L   + +      C ++LV ++++
Sbjct:  272 MASHMALGLLFLGGGRYSLCTSNSAIAALLCALYPRFPAHSTDNRYHLQALRHLYVLAAEPRLLVPVDVDTNTPCYALIKVTYKASQWCEEMTVNLMAPSLLPELHLLKEIKVKGPKYWEIMMDLSK-------GLTSLQSILSKDGF---------LYVKLRAGHLSYTEDPKGFRSLLAQTF--THRN-----PEFLSIKP-EAVSAFTSDPALLSFAEYFCKQSKKEGKQDILD-----------------------------------------LLSSILYECVTQEKPEMLPTYMAIDQAVRRLERKE-MTETFELCQIKLVQQFYN 537          
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|512964286|ref|XP_004844373.1| (anaphase-promoting complex subunit 1 isoform X1 [Heterocephalus glaber] >gi|1196722215|ref|XP_021113628.1| anaphase-promoting complex subunit 1 isoform X1 [Heterocephalus glaber] >gi|351708780|gb|EHB11699.1| Anaphase-promoting complex subunit 1 [Heterocephalus glaber])

HSP 1 Score: 142.124 bits (357), Expect = 3.378e-32
Identity = 108/332 (32.53%), Postives = 164/332 (49.40%), Query Frame = 0
Query:    1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRL-----ERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVLPTMDPVAAACTTCNLRLVLRYFS 327
            +A HMA+G LFLGGGR  L  S+S++AAL+ ALYP  PAH++DN+Y LQA+RHLYVLA   R +   D +T    +  LEV Y+  +      E  +AP LLPEL LL ++  + PRY+ L   +         G ++ +    + G          + VK + G LSY +DP   +SLL +       +R+++  AF      E I+AFT DP LL+FA +FC    ++G+K                                        Q    L + VLYEC+T+E P++L  + ++   ++ L   + ++  C    ++LVL +FS
Sbjct: 1554 LAHHMALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLLVPVDVDTNTPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLIDLSK-------GTQHLKSILSKDGV---------LYVKLRAGQLSYKEDPMGWQSLLAQTVA----NRNSEARAF----KPETISAFTSDPALLSFAEYFCKPTVSMGQK----------------------------------------QEILDLFSSVLYECVTQETPEMLPAYIAMDQAIRRLGRRE-LSETCELWQIKLVLEFFS 1820          
The following BLAST results are available for this feature:
BLAST of EWM22048.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102463|gb|EWM22048.1|0.000e+0100.00anaphase-promoting complex subunit 1 [Nannochlorop... [more]
gi|762159466|ref|XP_011417930.1|2.104e-3931.92PREDICTED: anaphase-promoting complex subunit 1 is... [more]
gi|676394023|ref|XP_009040289.1|4.620e-3833.77hypothetical protein AURANDRAFT_38761 [Aureococcus... [more]
gi|1016699428|ref|XP_016071685.1|1.938e-3732.23PREDICTED: anaphase-promoting complex subunit 1 [M... [more]
gi|857975716|emb|CEO98220.1|1.649e-3534.10hypothetical protein PBRA_006333 [Plasmodiophora b... [more]
gi|1207918571|ref|XP_021348141.1|3.960e-3531.53anaphase-promoting complex subunit 1-like [Mizuhop... [more]
gi|632952941|ref|XP_007892129.1|3.676e-3335.12PREDICTED: anaphase-promoting complex subunit 1 is... [more]
gi|632952939|ref|XP_007892127.1|3.676e-3335.12PREDICTED: anaphase-promoting complex subunit 1 is... [more]
gi|1160117214|ref|XP_020384856.1|5.107e-3332.23anaphase-promoting complex subunit 1-like [Rhincod... [more]
gi|512964286|ref|XP_004844373.1|3.378e-3232.53anaphase-promoting complex subunit 1 isoform X1 [H... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8675rna8675Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications