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Properties
| Property Name | Value |
|---|
| Product | dna-directed rna polymerase ii kda polypeptide |
| Orig transcript id | gnl|cribi|Naga_100060g8.5503.mrna |
| Orig protein id | gnl|cribi|Naga_100060g8.5503 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:343517..344641 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8586 ID=rna8586|Name=rna8586|organism=Nannochloropsis gaditana|type=mRNA|length=1202bp
CATCGGGAGTAGGGTATCTTGATGGCTTGATCGGTCCAAATGCGTGCGGC
ACCCGAGTCATTCACCACGTACACGCGTATGGACACAGGCGATTCTGCAA
TCACAGTAAGATCACGATGACGCAGCCACATCTGTCGGCGCGGCGGATAG
TGCCTGCCCTCGCAATTAGCATTTTGTTAGTTGCAAACGGAGGCACAGCC
TCGGCCGCAAGAAGTTTTCTTTTAAAAAGCCAGCATACCTTCGCAAAAGC
ATCAAATAAAAAGGGGTCTCACATGCACGACGAATCAAAGGTACCAGTTA
TCGTCCGTCTGGCTTTGCAATATCGTGGAGGCGAAAGCTCCTCCCTGACC
AAGGCCGCCGAGCACAACGCCAGCGCCACGGACGAGTCTGCTGCCTCCTC
ACTGCGTGATGTTGACGCCAGCGAAGAGGAGGAAGGTAGCCAAGGCGTAG
AAGGGGAAGCGGAGGCCGATCCGCCCACAGAGGAGGATGAAGGTAGAGCA
GCCGCGGGCGCCCCCGGGGAGGGGGCTGGCGAAGGGGAGGACGAGGACGA
TGCGTTTCAAGACGCCGTGGCCCCTGATGTGGCCCCTGTGGCTGAAAAGG
AGGAGGCAAAGCATGCGGTGGAGGGAGAGGAGGGGGAAGAGGAGGATGGC
GCGGCCGCCGCGGTGGCGACGGTGAGTCAAGAGCTGTCAGGACCGGAGAC
AGTGCGAAGACAACGCGCAGAGACGGGGGGGAACATGAAAAAGGACAAAT
ACAACGCCAAGATGCAATGGCTGATCACCAACAAGATGAAGAAGGTGCTG
CGCGAGGAGTTGCACTACGAGGCAGCGGAAGTGGAGGCGATGATGCCGGA
CGTGGCCGCGGTGGTCATCAACAAGCACCTGGAACGGCCCAAGCGAGGCA
TGCCCGCAGAATGGCGCAAAGACTTCCATTTGCGACGCCGGGGCTGGGAC
GCACTCCAGGCCGGTCTTGTCCAAGCGGCGCGGCGGTTGGTGGAGGAGCC
GCGGGTGCTGTTGCGACAGGTGGGTTTGGTGGCTGTGGCCGCGGTGGGCG
CGGGGGCGGCGCGGCGGTGGATGGAGGCAAGGCGGGCGGGGGAGGAGGAG
GAGGAGTGGGAGTGGGTGGAGATGACGCCGTGGGAGGAGTTTGTGGACCG
GTGGCAGCGGCGACTCCCGGGGAGGGGGCGGGGGGCGAGGGGGAAGCAGT
GA back to topprotein sequence of rna8586 >rna8586-protein ID=rna8586-protein|Name=rna8586|organism=Nannochloropsis gaditana|type=polypeptide|length=171bp
MLLHVHAKPRVTIYTITAKAFLIPAITLHAVCFQVPRAVRCEAGRGFPPE
RPKTMKFCPNCNFILYPKEDKDERKLVYYCRSPRCDHEEDAPDPYVFRNQ
VIKTRTVNLDHVLSAVANDPTLQRSTADCPLCHYHEAVLIQSTQNVKSNK
LTLIFVCCNPNCGHKWTDDDP back to topmRNA from alignment at KK037249.1:343517..344641- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8586 ID=rna8586|Name=rna8586|organism=Nannochloropsis gaditana|type=mRNA|length=1125bp|location=Sequence derived from alignment at KK037249.1:343517..344641- (Nannochloropsis gaditana)
CCCCTCTACTGTCTCTCCGAGCCTGGCTCTACCCCAATGTTTTCCCCTTA
TTTCCTCCCGTACCATCGTCTCCGGCCATGCTCCTACATGTTCATGCCAA
ACCACGTGTTACCATCTACACGATCACAGCGAAAGCTTTTCTCATCCCCG
CGATCACCCTACACGCTGTTTGCTTTCAGGTCCCGCGGGCTGTCAGGTGC
GAGGCGGGCAGGGGCTTTCCTCCGGAGCGTCCAAAAACCATGAAATTCTG
CCCAAACTGGTAAGATTGACGCGGTGACATGCTACGTTGCGACTCCACCC
TCTTCTTAAATTGTTGTCCGAACATTGAACTTTATCATGTGATCCTTCCG
CTTCTCTGCTCTCGTGCCACCCCCAGCAATTTTATCCTTTACCCTAAGGA
GGACAAGGATGAACGCAAGCTGGTATACTACTGCCGGTCACCGCGTTGCG
ATCATGAGGAAGACGCGCCTGACCCATACGTCTTCCGCAACCAAGTAATC
AAGACCCGCACGTAAGGTTTTATCTTTCCACGCTTACCCTCTTCCCTTGC
CTTTTCCTCATCCTCCCCCTCAATCCCTCCTTCCCCTACCTCCCCCTTTC
TCACTCGTCCTTTTTCCTCTTGCCCGTTTCGCCCTCGCACCCCGATCGCC
ACGCCATGCCCTGCACCCCAGCGTTAACCTCGACCACGTGCTGTCCGCTG
TGGCCAACGACCCAACGCTCCAGCGGTCCACTGCCGACTGCCCCCTATGC
CACTACCACGAGGCGGTGCTCATCCAGTCCACCCAGAATGTGAAATCGAA
CAAACTCACCTTGATTTTTGTCTGTTGCAACCCGAATTGCGGGCATAAAT
GGACTGACGACGATCCTTGATACTTTGATGGAGGAAAGGAGGGAGGCAGG
AAGGGAGGCAGGAAGGGAGGGAGGAAGGGAGGGAGAAAAGGATGGAGGAA
GGGAGGGAGGATATGGAGGGGTCTTTTTTTGAGGCAGGCCTCTCAGTGTA
CAGAGAGGAAGGGAGGGAGGGAGGCAGGGAAGGGAGGGCGGAATTTCGAG
CATGTAAAGTAAAACAACTTCCACAGGCCGCGGGCCCGGAGTCAAAGCCC
GGCCACCGCGAGGCAGTCTTTCCCC back to topCoding sequence (CDS) from alignment at KK037249.1:343517..344641- >rna8586 ID=rna8586|Name=rna8586|organism=Nannochloropsis gaditana|type=CDS|length=1548bp|location=Sequence derived from alignment at KK037249.1:343517..344641- (Nannochloropsis gaditana)
CGTTAACCTCGACCACGTGCTGTCCGCTGTGGCCAACGACCCAACGCTCC
AGCGGTCCACTGCCGACTGCCCCCTATGCCACTACCACGAGGCGGTGCTC
ATCCAGTCCACCCAGAATGTGAAATCGAACAAACTCACCTTGATTTTTGT
CTGTTGCAACCCGAATTGCGGGCATAAATGGACTGACGACGATCCTTGAC
AATTTTATCCTTTACCCTAAGGAGGACAAGGATGAACGCAAGCTGGTATA
CTACTGCCGGTCACCGCGTTGCGATCATGAGGAAGACGCGCCTGACCCAT
ACGTCTTCCGCAACCAAGTAATCAAGACCCGCACATGCTCCTACATGTTC
ATGCCAAACCACGTGTTACCATCTACACGATCACAGCGAAAGCTTTTCTC
ATCCCCGCGATCACCCTACACGCTGTTTGCTTTCAGGTCCCGCGGGCTGT
CAGGTGCGAGGCGGGCAGGGGCTTTCCTCCGGAGCGTCCAAAAACCATGA
AATTCTGCCCAAACTGCGTTAACCTCGACCACGTGCTGTCCGCTGTGGCC
AACGACCCAACGCTCCAGCGGTCCACTGCCGACTGCCCCCTATGCCACTA
CCACGAGGCGGTGCTCATCCAGTCCACCCAGAATGTGAAATCGAACAAAC
TCACCTTGATTTTTGTCTGTTGCAACCCGAATTGCGGGCATAAATGGACT
GACGACGATCCTTGACAATTTTATCCTTTACCCTAAGGAGGACAAGGATG
AACGCAAGCTGGTATACTACTGCCGGTCACCGCGTTGCGATCATGAGGAA
GACGCGCCTGACCCATACGTCTTCCGCAACCAAGTAATCAAGACCCGCAC
ATGCTCCTACATGTTCATGCCAAACCACGTGTTACCATCTACACGATCAC
AGCGAAAGCTTTTCTCATCCCCGCGATCACCCTACACGCTGTTTGCTTTC
AGGTCCCGCGGGCTGTCAGGTGCGAGGCGGGCAGGGGCTTTCCTCCGGAG
CGTCCAAAAACCATGAAATTCTGCCCAAACTGCGTTAACCTCGACCACGT
GCTGTCCGCTGTGGCCAACGACCCAACGCTCCAGCGGTCCACTGCCGACT
GCCCCCTATGCCACTACCACGAGGCGGTGCTCATCCAGTCCACCCAGAAT
GTGAAATCGAACAAACTCACCTTGATTTTTGTCTGTTGCAACCCGAATTG
CGGGCATAAATGGACTGACGACGATCCTTGACAATTTTATCCTTTACCCT
AAGGAGGACAAGGATGAACGCAAGCTGGTATACTACTGCCGGTCACCGCG
TTGCGATCATGAGGAAGACGCGCCTGACCCATACGTCTTCCGCAACCAAG
TAATCAAGACCCGCACATGCTCCTACATGTTCATGCCAAACCACGTGTTA
CCATCTACACGATCACAGCGAAAGCTTTTCTCATCCCCGCGATCACCCTA
CACGCTGTTTGCTTTCAGGTCCCGCGGGCTGTCAGGTGCGAGGCGGGCAG
GGGCTTTCCTCCGGAGCGTCCAAAAACCATGAAATTCTGCCCAAACTG back to top
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