rna8577, rna8577 (mRNA) Nannochloropsis gaditana

Overview
Namerna8577
Unique Namerna8577
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length564
Alignment locationKK037249.1:318216..318539 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100060g18.5482.mrna
Orig protein idgnl|cribi|Naga_100060g18.5482
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:318216..318539 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100060g18gene8313Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22114.1cds8550Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8577rna8577-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8577 ID=rna8577|Name=rna8577|organism=Nannochloropsis gaditana|type=mRNA|length=564bp
ATGGGTTTGCTTTCTATACTCAAGAAAGTCAAGCGAAAAGAGAAAGAGAT
GCGTCTCCTGATTCTTGGGCTAGATAATGCCGGTAAAACGACAATTTTGA
AGAAATTTAACGGCGAGGAAATAAGCACCATTGAGCCCACCCTCGGCTTC
AACATCAAGACCCTCGAATATCAAGGATACCTTTTGAACGTGTGGGACGT
AGGGGGGCAGCAGACGATCCGTTCCTACTGGCGAAACTACTTTGAAGCGA
CGGACGGTTTGATATGGGTCGTGGATAGCGCAGACCGGCGACGGCTAGAA
GTGTGCAGACAGGAACTTCACGCGTTGCTCCAGCAGGAAAAGCTGGCGGG
GGCCTCCTTGTTGGTATTTGCGAACAAACAGGACTTACAAGGAGCACTTC
CCCCCGGCGAGATCGCACTGACATTGGGATTGGAGGACGAGGCGTTTGCG
AAAGGACGGCATTGGACGATCGTAGGCTGCAGTGCGATGACGGGCGACGG
GCTCGAGCACGGAGTTGGATGGATGGTCAGGGACATTGCCAGCCGGATAT
TCATGTTAAATTAA
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protein sequence of rna8577

>rna8577-protein ID=rna8577-protein|Name=rna8577|organism=Nannochloropsis gaditana|type=polypeptide|length=107bp
MLTLGLLLSLALPVSSGPKDELSKMRKGLSIAKQCFKCISSTSYKVYASF
SSECCKKRTKDQPSYRYSPLSLPQGLCSSFFLLFFELGDAAVEIHSNLPL
EFLTEAL
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mRNA from alignment at KK037249.1:318216..318539-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8577 ID=rna8577|Name=rna8577|organism=Nannochloropsis gaditana|type=mRNA|length=324bp|location=Sequence derived from alignment at KK037249.1:318216..318539- (Nannochloropsis gaditana)
ATGCTGACGCTTGGCCTCCTCTTGAGCCTTGCGCTCCCTGTATCGTCAGG
TCCAAAGGATGAGCTCTCCAAAATGCGTAAAGGCTTATCAATCGCAAAAC
AATGCTTTAAGTGCATATCATCTACCTCATACAAAGTTTATGCTTCTTTT
TCGAGTGAGTGTTGCAAAAAAAGGACTAAAGACCAACCCTCGTATCGGTA
CTCACCGCTCAGCCTTCCGCAAGGCCTCTGCTCGTCGTTTTTCCTGCTCT
TTTTTGAGCTTGGAGACGCTGCGGTCGAAATCCATTCAAATCTCCCCCTC
GAATTTCTCACTGAGGCTCTCTGA
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Coding sequence (CDS) from alignment at KK037249.1:318216..318539-

>rna8577 ID=rna8577|Name=rna8577|organism=Nannochloropsis gaditana|type=CDS|length=324bp|location=Sequence derived from alignment at KK037249.1:318216..318539- (Nannochloropsis gaditana)
ATGCTGACGCTTGGCCTCCTCTTGAGCCTTGCGCTCCCTGTATCGTCAGG
TCCAAAGGATGAGCTCTCCAAAATGCGTAAAGGCTTATCAATCGCAAAAC
AATGCTTTAAGTGCATATCATCTACCTCATACAAAGTTTATGCTTCTTTT
TCGAGTGAGTGTTGCAAAAAAAGGACTAAAGACCAACCCTCGTATCGGTA
CTCACCGCTCAGCCTTCCGCAAGGCCTCTGCTCGTCGTTTTTCCTGCTCT
TTTTTGAGCTTGGAGACGCTGCGGTCGAAATCCATTCAAATCTCCCCCTC
GAATTTCTCACTGAGGCTCTCTGA
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Synonyms
Publications