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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100064g22.4096.mrna |
| Orig protein id | gnl|cribi|Naga_100064g22.4096 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:227490..228321 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8545 ID=rna8545|Name=rna8545|organism=Nannochloropsis gaditana|type=mRNA|length=3838bp
GTCCTCAAGTCGGGGATCGGAAGGGAGGAAAGGACGGCGAGCGTCGGTGG
TCGACTTGTACCCTCGGGACGGACGGGTGCACGGGGAGCAAGGCTGCACG
AGCGTGGCCATCAATTATACGCGTATCGTCATGTATTGTTGAGGCGGCAT
CAAACCCGAGATTTCTGTCTTTTCCGTACACTGGCTCGGGCCCAGCGTCT
CCTCCCGGACGACCGGGAAGCCTTGTGTCCGCGTGAGATCTTGAGGCTCT
GGTGTTTTCCTTTTTCCACGCGGGCATGCATGGGATTTTTGCATGTTTTT
ATATATATATGTTCGGGCTGGAGCAATTTGTGACGTGGATTGTACACGTG
GTTCGGCACGAAAATGCCCCGAAGGCGATGACGGTGCGCCCAAGGACACC
ACTCCAGAAGGCTCGTTTCTCGAGCCTGATCCGTGGTGTCCCTTCTCTTG
GCAACTTTGGGATTGTCACAGCTTTGATATTTGTGTGTGGTTGTCTTCAG
TGTCGTGTTTGGCAATGGTGCTTGGTCATGACTGCTTCAGGCTTGCCGCA
TGTATTTCAGAGCGACCTCCCTGAAAAATGGCATCCAGAAATGTTCCAGA
TCTCCCAAACATGTACTTTTCACTGCACCTCACACGTTGACATGCTTTGG
AATCAGGGTGGAAGCATGTGAATGGGCTTAATTTTGCCTCAAGTCTCAGA
AACGTGTCGTTGTATCCCCGCATCTCTACACTACCCTCCAATCGGAACAC
TTCCTCACTTTGGACCCTTTTCGCATATCCTGTCTCAAACACAGCGTCCA
CGACAGCGAAGACAAGGTGTTACGTCTGAGTGGGAGAGCCTGTAATACCG
CATCATGGGGGTCTTCTCTGCCTCCTCCTCCTCCTCCCTTTCCTTTGCTT
CCTTCCCCTCTTCCTCCAGCACCGCCCGTTCTCTCCCTACGGCCGTTCTC
CTCCTCACCACCTTGACTGCACTGACATCGTCCGTCACCGCGTTCCACGC
TCCTTCCACTTCCATCACATCCTCCGCACACATGACTTTTCCAGCCTCCT
CGCGCACCAGCAGCGGCGGTGCAAGGTCGCCCCTGCCCATCAGAGCCCGT
CCTCGACGCACCGTGTTCATGGAGACCCCCCTGGAAACCGGGGCTGGGAG
CAGCAGCACTAGCAATGTGCCCCCCCCAGGCACGGGTCCTTACCAAGGCC
CGTCTTCCTTCCCCTTGCTGGACTCGGTCCGGTACCCGCACGACATGAAA
CGCTTCGACCTGAAGGACTTGAAGCAACTCGCGCACGAACTTCGGTGGGA
CACCCTCCACCACGTATCCAAAACAGGGGGCCACCTGGGCTCCTCCCTAG
GCGTGATCGAACTCACCGTCGCCCTCCACTACGTGTTCAACACCCCCGAC
GACCGCATCGTCTGGGACGTCTCCCACCAGGTCTACCCGCACAAAATTTT
GACCGGGCGGAGGGACAGGATGCACAGCCTCCGGCAGACCAATGGGCTGT
CCGGCTTTGCCAAGCGGAGCGAGAGCGAGTATGATGCCTTTGGGGCAGGG
CACTCCTCCACGTCCATATCGGCGGCGTTGGGGATGAGCGTGGGCAAGCT
CCTGACCAATAAACGGGTCAACAACTGCGTGGCGGTGATTGGGGACGGGG
CGATCACAGGCGGGATGGCCTTTGAGGCGTTGAACAATGCTGGATACCTT
CGGTCCCGCATGGTGGTGATATTGAACGACAACGGCCAAGTCTCCCTCCC
GACTGGCACCCATTCCGCCGGGGGTGTCGTCCCAGCCGGGGCCCTCTCTT
CCTACACCTCCCGCTTGCTCTCTTCCAAGCCCTTCCAAGACTTTCGATCC
TTTGCCAAAGGGTTGAACCGGCTGATGCCGTCGGAGATTCAGGACATTAA
CGCCAAGCTGGACGAGTACGCCCGGGGTTTGATCCAGGGGGGCACCCTGT
TCGAAGAACTCGGCTTCTACTACATCGGGCCCGTGGACGGCCACGACTTG
GACAACCTGGTGCCTATTTTAGAGAATTTGCGGGATTCGCCCTCCACGAA
ACCCGTGTTGCTGCATGTGAAGACCGAAAAGGGGTACGGATACCCCCCGG
CGGAGGTGGCCTCTGACAAGTACCACGGGGTGGCGAAATTCGACGTGTCG
ACCGGGAGGCAGTTTAAGGGCGGGAACAAGGGAGCTCCGTTGTCCTTGAC
CACGACATTTGCCAACGCCCTGTGTGAGATCGCGGCGGAGGACAGGACGG
TGGTAGGTATCACGGCGGCCATGCCTGGCGGAACGGGGATGGATATTTTC
GGGAAACGCTTTCCCAAACGCACATTCGACGTGGGTATTGCGGAGCAACA
CGCCGTGACCTTCGCGGCGGGGATGGCGATTGAGGGGTTGAAACCTTTTT
GCTGCATTTATTCCACGTTTATGCAGCGGGGTTACGACCAAGTGATCCAT
GACGTGGTGATTCAAAAGCTGCCCGTTCGGATGATCTTGGACCGGGCGGG
TCTGGTGGGGAATGATGGACCAACCCACCACGGCTCTTTTGACCTGTCCT
ACCTGGGGGCCCTGCCGGACATCGTCATCATGGCCCCGTCGGACGAGCTG
GAGCTGATGAATTTGTTGGAGACGGCCTACGAGACCAATGATCTGCCGTC
CGTGGTACGCTATCCCCGGGGCGCGGGCTATGGATTGGAGACTTTGAAAT
CTGAGTTGGGCTACGAATGGTTGGAAGAGTTGCCCAAACGCGGAAAGGCG
GTTGCCCGCGGGAAGGGGCGAATCATCCGTCGTTCCGCGGTCGTCCCATC
CACGGCTGCGCCAGGCACATGTCGCGTTGCCCTATTGTCGGTCGGGACCC
GCCTGCTCGACACGGTTCACGCAGCCAAAGAAATAGAGGAAAATTTACCC
GGTGTAAGTGTGACGGTGGCGGACGCGCGTTTTGTGAAACCTCTGGACAA
GGAAATGGTCTCGTCTTTGGCCATGGAGCACGACGTCTTGATTACGGTGG
AGGAGAACAGCGTCGGGGGTTTCGGGTCGTTTGTGCAGCAATTCCTTCTG
AATGAAGGCCTGTTGGATGGAGGCAAGCTCCGATTGCGGTCGATGGTCCT
TCCCGACCGGTTTATCGAAGCAGGCCCGCAAAGCGATCAGTACGATCAGG
CCGGACTGGCCGCCAGGCATATTGTGGAGAAGGTGGAGGGCCTGGTGCGG
GGGCGGGAGGAACGCATGCTACAGCAAGAACAGCAACAGCCCCAGCCGCA
TCAACAACAGCAACAGCAGACGGGAGCGGGAGTGGGGACGGTGGCGGAGA
TGGTGGGGGTAGGTGCAGGCAAGTCTAGCAGCAGCAGTAGTAGCAGCAGC
AGGCAAGGCACGTCCTTTCAAGTTCTTCCTTGACAGTAGGGGGGCAAAAT
GTGGGGTGACAAAGGTCGGGAAAGTCGAAAAGGCGGCTGGGGTTTTCTCT
GGCGCGCTTGAGGCTGGCGGAAGGACGTGTGTAAGCCTGGTAATGCCTGG
TCTCTGAACCTCGCACTGTAAATTTATGCGGGAGTAAGCCTGATGGAGAG
TTGACAAATGAAGGGGAAGGAGTAGCGTCGAGAGGATAGCACCGATGAAA
TGTTTGAATGCATTTTGAACAGTTGAGGGAGAAGGTGAACTTTTCGGGCG
ATGGGGATGACGGGAGAAATTTTCGGTGTAAGTGATGCTCGAGGAGCAGA
GCCATGACGACGGGAGGGAGAGAACGCGCGTCCAAAAGTGGACAACGTAC
TGAAGAAGCAAAAACGTCTCGCGACGGGAGACAGTTTCGTTCCAGCATTC
CGTGTCGAGCCTGGAAATTGCGGTGAGATGGCTTTCCC back to topprotein sequence of rna8545 >rna8545-protein ID=rna8545-protein|Name=rna8545|organism=Nannochloropsis gaditana|type=polypeptide|length=164bp
MDELALEAAPTALEPTIAPTAPTILPFASPSTDPTALPTAVPTAAPSAAP
TSMPTSSPTAAPTTLPTATGVPTANPSAFPSSLPSMTPTILPFALPSADP
TALPTAVPTAAPSAAPTSMPTSSPTATPTLLLTAIPTTAPSVAPTFAPTR
VPTPAFTIGPPPPS back to topmRNA from alignment at KK037249.1:227490..228321- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8545 ID=rna8545|Name=rna8545|organism=Nannochloropsis gaditana|type=mRNA|length=832bp|location=Sequence derived from alignment at KK037249.1:227490..228321- (Nannochloropsis gaditana)
ATGGATGAGCTTGCTTTAGAGGGTGGGCGACGATTGAATCCTGTGATCTC
CACGCCTTCCGACTGCTACACGTACTGCTCATTGAACGGAGGGGAGCCGG
CACCGTTTTTTATAACTTGAAACACGGCCACAATGCAATGTTTTGTTGCG
GTGGAACGTGCACCTTGATCTATGAGCCTGACTATGTCGCATTAAGGCTG
TTCTGGACGCACCCACAATACCCACAGCAGCTCCCACGGCGTTAGAGCCA
ACAATTGCCCCAAGTACGGCTCCTACCCCTCTAACAATGTTAACAACTGC
CGCCCCCACCGAAGGCCCTACTGCTGCCCCTACCATCTTGCCCACTGGAA
TTGCTACTGCTAATCCGATCACTTTTCCTTCCCCATTACCTATAGCTGCT
CCCACCATCCTGCCCTTTGCGTCACCAAGTACGGATCCTACCGCCCTTCC
TACCGCTGTTCCTACCGCAGCACCTTCAGCTGCCCCGACCTCCATGCCCA
CCTCGTCGCCTACTGCCGCACCTACCACATTACCCACTGCAACTGGAGTT
CCTACTGCTAATCCGAGCGCTTTCCCTTCCTCTTTGCCTTCAATGACTCC
CACCATCCTGCCCTTTGCGTTACCAAGTGCGGATCCTACCGCCCTTCCTA
CCGCTGTTCCTACCGCAGCACCTTCAGCTGCCCCGACCTCCATGCCCACC
TCGTCGCCTACTGCCACACCTACGCTACTGCTCACTGCAATACCTACGAC
GGCTCCATCAGTTGCTCCAACGTTTGCTCCCACAAGGGTCCCTACTCCTG
CCTTTACGATTGGTCCTCCCCCTCCTTCATAA back to topCoding sequence (CDS) from alignment at KK037249.1:227490..228321- >rna8545 ID=rna8545|Name=rna8545|organism=Nannochloropsis gaditana|type=CDS|length=1485bp|location=Sequence derived from alignment at KK037249.1:227490..228321- (Nannochloropsis gaditana)
CTGCTCCCACCATCCTGCCCTTTGCGTCACCAAGTACGGATCCTACCGCC
CTTCCTACCGCTGTTCCTACCGCAGCACCTTCAGCTGCCCCGACCTCCAT
GCCCACCTCGTCGCCTACTGCCGCACCTACCACATTACCCACTGCAACTG
GAGTTCCTACTGCTAATCCGAGCGCTTTCCCTTCCTCTTTGCCTTCAATG
ACTCCCACCATCCTGCCCTTTGCGTTACCAAGTGCGGATCCTACCGCCCT
TCCTACCGCTGTTCCTACCGCAGCACCTTCAGCTGCCCCGACCTCCATGC
CCACCTCGTCGCCTACTGCCACACCTACGCTACTGCTCACTGCAATACCT
ACGACGGCTCCATCAGTTGCTCCAACGTTTGCTCCCACAAGGGTCCCTAC
TCCTGCCTTTACGATTGGTCCTCCCCCTCCTTCATAACAGCTCCCACGGC
GTTAGAGCCAACAATTGCCCCAAATGGATGAGCTTGCTTTAGAGGCTGCT
CCCACCATCCTGCCCTTTGCGTCACCAAGTACGGATCCTACCGCCCTTCC
TACCGCTGTTCCTACCGCAGCACCTTCAGCTGCCCCGACCTCCATGCCCA
CCTCGTCGCCTACTGCCGCACCTACCACATTACCCACTGCAACTGGAGTT
CCTACTGCTAATCCGAGCGCTTTCCCTTCCTCTTTGCCTTCAATGACTCC
CACCATCCTGCCCTTTGCGTTACCAAGTGCGGATCCTACCGCCCTTCCTA
CCGCTGTTCCTACCGCAGCACCTTCAGCTGCCCCGACCTCCATGCCCACC
TCGTCGCCTACTGCCACACCTACGCTACTGCTCACTGCAATACCTACGAC
GGCTCCATCAGTTGCTCCAACGTTTGCTCCCACAAGGGTCCCTACTCCTG
CCTTTACGATTGGTCCTCCCCCTCCTTCATAACAGCTCCCACGGCGTTAG
AGCCAACAATTGCCCCAAATGGATGAGCTTGCTTTAGAGGCTGCTCCCAC
CATCCTGCCCTTTGCGTCACCAAGTACGGATCCTACCGCCCTTCCTACCG
CTGTTCCTACCGCAGCACCTTCAGCTGCCCCGACCTCCATGCCCACCTCG
TCGCCTACTGCCGCACCTACCACATTACCCACTGCAACTGGAGTTCCTAC
TGCTAATCCGAGCGCTTTCCCTTCCTCTTTGCCTTCAATGACTCCCACCA
TCCTGCCCTTTGCGTTACCAAGTGCGGATCCTACCGCCCTTCCTACCGCT
GTTCCTACCGCAGCACCTTCAGCTGCCCCGACCTCCATGCCCACCTCGTC
GCCTACTGCCACACCTACGCTACTGCTCACTGCAATACCTACGACGGCTC
CATCAGTTGCTCCAACGTTTGCTCCCACAAGGGTCCCTACTCCTGCCTTT
ACGATTGGTCCTCCCCCTCCTTCATAACAGCTCCCACGGCGTTAGAGCCA
ACAATTGCCCCAAATGGATGAGCTTGCTTTAGAGG back to top
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