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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100153g12.4147.mrna |
| Orig protein id | gnl|cribi|Naga_100153g12.4147 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037249.1 | supercontig | KK037249.1:178876..181035 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8529 ID=rna8529|Name=rna8529|organism=Nannochloropsis gaditana|type=mRNA|length=4877bp
AAGGTGACTCCTCTGTTTATACCTGAAGCAATATAAACCAGAATGGACGA
GGAAGAAAATAACATTAACAATGATGAGGAAGTGATTGCATCTTTTCCGG
GTCTGAAGCCAAGCCCAAAAACTCAGCTCCGCGCTCAACTCAAAGAGGCC
TCGAAAGCTCTGATGATGGAGCATGAATACATCCACCGGCTGGAGGAGGC
ACTGGCTGCTCATGGAGTCAAAGACTTTGAAGCATTACGGGAAAATCTTG
GACATTCCACTTCAAAATTTTCGTCTTTTCAACTGCATAGCCCACACTGT
CATCTCCACGAGCATTCTTCAGGACTAGCATCCCGGATGATCCCGACAGC
CCCCTCCTCCCCTCCTCCTCCGGAGCACCTTCCAACGCTTGGAAACAATC
TTTCCTACTCTGCAGCTGGTTCCATGTTGCAACACTACAGGAGTCCTAGC
CAACTGACGCGGCCCGACTACACTGAGATCTTCGACACATCGAACTGCGT
CCATCCTCCCAAGCTAATCCGCAGCGAAAGCGTCTATGCTCATGCTACTG
AGGTCCGCTTCGATGATCTAAACTACAGTGTACAACAGCAAAGTACTAGC
GGAACCACCCTCACGGTGGGAGCACAATGCCTGAAGATGTGGTCTTGGCC
GTTCACATGTTTGTTACGTAATAACCAGCAGCGACAGCAAGCGTCCTTTC
ACATATTGAAAGACCTTCGGGGCGTGCTGCTTCCGGGCCGTCTTACCCTT
CTCCTCGGCCCGCCTGGTTCTGGCAAATCCAGCTTTCTCAAGGCCCTGGC
AGGACGCGTGAAGCGGACCCGCACGTCGGTGCTGAAGGGCCGCGTGACGT
ACAACGGGGATACGGCGGAGTCCCATCGTTTTTCTTTACCCAAGGTGGTG
GCCTTCGTTTCCCAGGACGACTGTCACGCATCCACTCTGACCGTTCAAGA
AACGGTGCAATTCGCCTACGATTGCATGAATGGCCCGCAGGCCAAAATCG
GGCTTCCATCTCGTCTCCGGAACCCTCTGCCTTCCCACCGGGAATTGGCA
AAGCACCTCCTCCAAGAACAAGAGGCGGCTTCCTCCTCCTCAGCACCGTC
CGCCTCCATCTGTGCCCCTTCCTCTACCTTGGGGTCCGAGCGCTATGGGG
CCAACAAGAGGAATGGGAAGGTCGAACAGACGTTGCGGGTCCTCGGTCTT
TCTCGGTGCCAGCACACCATTGTCGGGAACACTTTGTGTCGCGGCATCAG
CGGCGGAGAAAAGAAACGGTTGACTACGGCGGAAATGACAGGCGGGCAGG
TCAATGTCCTTTTGATGGACTCAATTTCCACGGGATTGGATAGCGCCGCT
ACTTTTGACATATGCAAGACGCTGTCCGGCTGCACCCGGGCGTTACAGGC
CAACATTGTCGTCTGCCTACTTCAGCCCCCGCCCGAAGTCTTCGACCTCT
TCGACGACGTTATCCTGATGGATGCAGGGCACATTGTGTACCAAGGCCCG
CGGGAGCTCATTCTTGACCACTTCGAGAACTTGGGTTTCCGCCGGCCCCT
CCGTAAGGACGTCGCCGATTTCTTGGTGGAGGTGACGACGTCTGCGGGGG
CAGAATTCATCATTCCGGCCGCGCAACGCTACGCAGCTGGAATTCCTGAC
CCTCCCACCAGCACAGAAGAATTTGTGCGGGCCTTCCAAGAGACGGAAAT
TTACGAACACATGATCGATAATTTGGAACGTCCTCCCTCCTTCGCGCCCT
GGCTTCGGCGGCAGCGCTGCGAGTTCAGCAACGGATGGTTCCGAAGTACG
TGGTTGTGTCTCCAGCGTCAGGCTCGAATCACATTGCGAGACCGTGTCTT
CCTGCGCGGGCGGATCATGCAAGTTCTCCTCATGGGGGCGATGGCCGGAA
CCCTCTTCTACCAATTGGATGCGCATGATTGGTCGGACAAGGTCTGCATG
CTCTTCTTTTCCCTTATGTTTATCACCTTGGGAAATTTGGCCACCATTCC
CACGGTCATGGAGCAACGCGCCGTCTTTTACAAGCAACGGGACGCCGGTT
TTTTCCCGACCTCGTCCGCTGTGGTGGCGCAGATGCTTGTCCAAATCCCC
ATCCAGTTCGTAGAGACGATGGTTTTCACGTCTCTTGCCTATTTTTTGTC
TGCCTTATCACGGGCGGACTATGGCGCTTTTTATCTGACCTACGTTCTGG
TCGCTTTCTCCACCGCTTTGGGCATCGGACAAATCTTTCGCCTCGTCGTT
CACTTGGTTCCCAGCCTCGCCCAGGCACAGCCTATTTGCTCCCTCTTTGT
CTTACTCTTCGTCGTCTTCTCTGGCTTGACCATTAAAGGAGAGGACATAC
CATTCTATTGGACCTGGTTGTATTGGATCAATCCTCTGGCCTGGGGTCTT
CGGGCCTTGGCCGTCAACGAGTTCTCCTCGCCCACCTACAGCCAGCACAT
CATATATCCCCCGCCGGTCCCCAGGGCCATCCCCTGTGACCCCCGCAGGC
CGGAGGCATTGTTACAGTACACCGGTTCCAACGGACCCTTCCAATGTCTC
TCCGAGGGGGAGATCTATTTGATAAACCTAGGGTTTAAGACTAAGCGGGA
CTGGATTGTGTACGGAGTCTTGTTTTTACTTGCCCTCTGGAGCGTCATGT
TGATGCTGACCATGTTGGCCATGCGTTTGATCCGATGGACAGGACAGGGG
GCCGCTCCCGTGCCTTCCGCGGCAAAACGGGAAGAGCTTGCTGCTACTGA
AGATGAGAATCCTGGATACAAGGAGAAAGACCTCAACGAGGGCCCCGCGG
TGGGGGCGTCGGGCGCAGGCTATGATGCCTTCTCGTATGAACTGCTGTCA
GACGCGGATCCGGAGAAAGCTTTAGGCCATCAGTCGATGGGGCGGCGCCC
GAAACATCCCACAGGGGATTCCTTGACCTTTCAGCCCATAACCCTTGTAT
TCAAGCACATTTGGTATTCTGTGGAGCTGCCCAAGCCCCAAGGTGGAGGC
AAAGAACGCGTGGAGCTGGTCAAGGGGGTGACCGGGTACGCCAGGCCAGG
TTCCTTGACCGCATTGATGGGGTCATCGGGGGCGGGGAAAACCACCCTCC
TCGACGTGTTGGCCGGGCGGAAAACCACGGGGTGCATCATTGGCGAGATC
CTGGTGAACGGTTTTCCCAAGGAACAGCGGGCTTTTTCGCGGGTAATGGG
TTATGTCGAGCAAACAGACGTGCACTCCCCACATTCCACCGTCCGGGAAG
CCTTACTTTTCTCGGCGACTCTACGGCTACCCTACACACAAGTGACGGCC
GCACAACGCGAGGTTTTCGTGGAGGACATGCTCGCATTGCTGGAATTGAG
TGGGATTGCCGACCGGGTGATCGGCGAGGATGCAGGATCCGGACTGTTGA
TGGGGGAGCGGAAACGGGTCACGATCGGTGTGGAGTTGGTCGCAAATCCT
TCTGTGCTCTTCTTGGACGAGCCCACTACCGGACTTGACGCTGCCAAAGC
TTTTGAGGTCATGCGTTCCGTGAAAAAAATTGCAGCCAGCGGCCGCTCGG
TCCTCTGCACGATCCATCAACCGAGTTGCGCAATTTTTGAAATGTTCGAC
ATGCTCCTGCTCCTCCGACACGGGGGTAGGACGGTGTACTTCGGTCCGTT
AGGCAAGCGGAGCAAGGATCTCATCAATTATTTGGAGGCAGTGCCAGGCG
TGATACCCTTGCGCACCGGGGGTGTGAATCCGGCAAATTGGATGCTGGAG
TGCATCGGCGCGGGCATTGAACCGGCCGCCCAACCTCTCGACTTTGCCGA
ATATTACCGAGACCACGCCTTGGCCCGCCGGAACGAAGAAATTTGTGACA
GCCTGAGTCGGCCGTTTGACTCCCACGGGCATGGTCTCGAACCCATTGCC
TTTGACAGTCGCTACGCGGCGCCTTTGAAGGTACAACTCCGGGCATGCAT
GGCGAAGGCAATCAAGAACTATTGGCGGTCCCCTAATTACAATTTCACGC
GCATGTTCATCTCGGTCCTGGTGGCCGTAGTCTTTGGATCCGTCTTCCAC
GACAAACCCTACGACACCGAAACCGACATCGTCGGTCGGGTGGGCCTTAT
GTACCTGTCTACGTCCTTCGTGGGCATCGTGAACATGATGAGCGTCATGC
CTGTGATGGCAAAAGAACGCGCGGCCTTCTACCGAGAGCAAGCCAGTTCG
ATGTACAGTGTCTTCGCCTACGGGGTCTCCTACGGCCTGGTCGAGCTGCC
GTACATCTTCGTGAGCACGGGGCTGTTCATCAACGTCTTCTATTGGTTCA
TTGGACTCGCTGCGGAGCCTTTTAGCAAATTTGTTTACTATTGGGTATTT
TTCGCCCTTTACATCGTGTGTTTGGTCTTCATCGGGCAATTCCTTATTTG
CTTGCTGCCCAACCAACAGACTGCGCAGGTGGCAGGCGCCTCCATTGCGG
CCATCATGAATCTTTTCGGCGGGTATTTGTGCACTCCCAGAACTATCACC
CCGTTTTGGAAGTTTGTGTATTACCTTGTGCCGTCACATTACATGTTGGA
AGGGCTCGTCATGTCCCAATTTGAAGGCGATTCGACGCCCGTGCAGCCCA
TCTATGGCCTCCAAGCCACGCCTGCGGACCAATACATCTACGACCACTTT
GGGGGGGAGTTTACTTATGGTGCCAAATGGAAGGACATCGGCGTCCTCCT
TTTGTATATATCGTTGCTGCGGATCGGCACCTTTGTTGTGATGACCTTCG
TGCGCCACATCAACCGGTGAAATGCACGGTGAAGAAAAAATAAATTTGGC
AAGACTGCGTATTTTACGTTTGAGTAAAATTTTCTCCACCGAAAAGTAAA
AATTTACTACCTCCGTGAAAACACGTG back to topprotein sequence of rna8529 >rna8529-protein ID=rna8529-protein|Name=rna8529|organism=Nannochloropsis gaditana|type=polypeptide|length=628bp
MLPRQATMPPFSGRRRSRALGPCEPHLCLAFCLGVLVHRPFSLAAAARDA
RVLPVPDDRPTSSPSKQPWHHHMRPLAFMHKSTHVPTQILVSQRPDRCTS
PVCVSATPTHASEHPSSQAPPPKPRKSTWERVSKVFNKVQDIAQSDDFQR
LARGTRTLLKEIDIEVPTMEQNLGALRRTLDRSLGSTLLSFEKLLQHYES
RSPEADVLLSVARKRVTKLVRHGLHQLMTPTAVEWAIYAVNSTALLVEEE
AARVLAAQEGSAENSLDVPSFQDMQREVMRRMVVVAEDVEALAQNVIQNR
WFRTGYSDEELKQLEALLHARVVPRLLLAVAAAVLHGWRPLQDPLLTLLV
VGFASGSLSKSVAGNLMELFEASLVVKDGWEGSGKEGERIVESFPDVWRT
RETAAEIGEALFRLFESVERRSAIRVEARQARARAAASAATGSIVTGTGT
AALPDESSPPTHVAIPPTPASTSPSSLPPAPTSLPSSSHAPSTPLSGEKK
FMVASYALPNKLTSLSGGAGPQAERERGRDSVYYPAFESTRRGKRLRYLV
TTVHLTRTYWKTAATAMLGTMGLVFLARLYGSPVELTIGGDERVEGREDR
REGRGRRRRDERRDGLLFSTPLEVLEEE back to topmRNA from alignment at KK037249.1:178876..181035- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8529 ID=rna8529|Name=rna8529|organism=Nannochloropsis gaditana|type=mRNA|length=2160bp|location=Sequence derived from alignment at KK037249.1:178876..181035- (Nannochloropsis gaditana)
AGTCGTTGTCATGCACGTTTCTCCAGGCTTTTCAGGAAGCTCGTGACCTT
AGCTAGATCTGGCCACTGCCGGATCATAAATAGGAGTCTTGACTTCCTTC
CCTCTCTTCATGCTGCCAAGACAAGCAACGATGCCTCCATTTTCCGGTAG
ACGGAGATCCAGAGCACTGGGACCATGTGAGCCACACCTGTGTCTCGCCT
TTTGTCTTGGTGTTTTGGTGCATCGTCCTTTTTCTCTGGCCGCCGCTGCG
AGGGATGCCCGCGTCCTCCCAGTGCCGGACGACAGGCCCACTTCAAGCCC
CTCCAAACAACCATGGCACCACCACATGCGCCCGCTTGCATTTATGCATA
AGTCTACCCATGTTCCCACGCAAATCTTAGTCTCCCAAAGGCCTGACAGG
TGCACCAGCCCTGTGTGTGTGAGCGCGACTCCCACACATGCCTCTGAACA
CCCTTCATCACAAGCACCTCCACCAAAACCTCGCAAATCTACCTGGGAAC
GGGTCTCGAAGGTCTTCAACAAAGTTCAGGACATAGCACAGTCCGACGAT
TTCCAACGGCTTGCCCGCGGTACCCGTACTTTATTGAAAGAGATCGACAT
CGAGGTCCCTACCATGGAGCAAAATCTAGGCGCGCTCCGGCGGACGTTGG
ACCGCTCCCTTGGCTCCACGCTCCTTAGCTTCGAGAAGCTTCTGCAGCAC
TATGAAAGCCGATCGCCAGAAGCGGACGTCCTTTTATCTGTGGCCCGTAA
GCGTGTCACAAAATTGGTGCGCCACGGCCTCCATCAACTCATGACCCCCA
CCGCCGTCGAATGGGCCATCTACGCCGTCAACAGCACCGCTCTCTTGGTG
GAGGAGGAAGCTGCCCGGGTATTGGCCGCACAAGAAGGCTCGGCGGAGAA
CAGCTTGGACGTTCCGAGTTTCCAAGACATGCAACGGGAAGTGATGCGAC
GCATGGTGGTGGTGGCGGAGGACGTGGAGGCCTTGGCGCAGAACGTGATC
CAGAACCGCTGGTTTCGGACCGGCTACAGCGACGAAGAACTGAAACAGTT
GGAGGCGCTCTTGCATGCCCGGGTGGTCCCTCGTTTGCTCCTGGCCGTGG
CGGCTGCGGTGTTGCATGGCTGGCGCCCTTTACAAGACCCGCTCCTGACC
CTCCTCGTGGTGGGTTTTGCCTCGGGAAGCCTGAGCAAAAGCGTGGCTGG
GAATCTTATGGAACTCTTCGAAGCTTCGTTGGTGGTGAAGGACGGGTGGG
AGGGGAGCGGGAAGGAAGGGGAGAGGATTGTCGAGTCTTTCCCGGACGTC
TGGAGGACCCGCGAGACGGCCGCTGAGATTGGCGAGGCCCTCTTCCGCCT
CTTCGAATCCGTGGAACGCCGCAGTGCCATCCGGGTTGAGGCCCGTCAGG
CCCGGGCTAGGGCGGCGGCATCGGCGGCCACTGGATCGATTGTAACGGGC
ACTGGAACCGCAGCGCTCCCTGACGAATCGAGTCCTCCAACGCACGTGGC
CATCCCCCCTACTCCCGCATCCACCTCTCCCAGCTCCTTGCCGCCGGCCC
CCACTTCTCTGCCATCTTCCTCTCACGCTCCATCGACCCCTTTGTCCGGG
GAGAAGAAATTCATGGTTGCTTCCTATGCCTTACCCAACAAACTCACCTC
TTTGTCGGGGGGCGCCGGCCCCCAGGCAGAAAGGGAGAGAGGACGGGATT
CCGTATACTACCCGGCCTTTGAGAGCACGCGTCGTGGCAAGAGACTCCGC
TACCTGGTCACGACGGTACATTTGACCCGTACATATTGGAAAACGGCCGC
GACGGCCATGCTAGGGACCATGGGATTGGTCTTCCTCGCGCGGTTGTACG
GCAGCCCTGTGGAATTGACGATTGGTGGAGATGAAAGGGTGGAGGGACGG
GAGGACAGGAGAGAAGGACGAGGGAGGAGGCGAAGGGATGAGAGAAGGGA
TGGTTTGTTGTTCAGTACACCTTTGGAAGTGCTCGAGGAGGAGTGAGAGG
AGCGCGGGCAGGGAAAGGAAGTCCATGAGAATGTAAGTGTATGTACAGAC
CCGCACATAAATTGCTTGTGTGATACAAGGCCATGAGGCTGTAATTTAAG
CATATTTGTACAAGAAAAATAATCTTTGTAACCCACGTGTTTTCACGGAG
GTAGTAAATT back to topCoding sequence (CDS) from alignment at KK037249.1:178876..181035- >rna8529 ID=rna8529|Name=rna8529|organism=Nannochloropsis gaditana|type=CDS|length=1887bp|location=Sequence derived from alignment at KK037249.1:178876..181035- (Nannochloropsis gaditana)
ATGCTGCCAAGACAAGCAACGATGCCTCCATTTTCCGGTAGACGGAGATC
CAGAGCACTGGGACCATGTGAGCCACACCTGTGTCTCGCCTTTTGTCTTG
GTGTTTTGGTGCATCGTCCTTTTTCTCTGGCCGCCGCTGCGAGGGATGCC
CGCGTCCTCCCAGTGCCGGACGACAGGCCCACTTCAAGCCCCTCCAAACA
ACCATGGCACCACCACATGCGCCCGCTTGCATTTATGCATAAGTCTACCC
ATGTTCCCACGCAAATCTTAGTCTCCCAAAGGCCTGACAGGTGCACCAGC
CCTGTGTGTGTGAGCGCGACTCCCACACATGCCTCTGAACACCCTTCATC
ACAAGCACCTCCACCAAAACCTCGCAAATCTACCTGGGAACGGGTCTCGA
AGGTCTTCAACAAAGTTCAGGACATAGCACAGTCCGACGATTTCCAACGG
CTTGCCCGCGGTACCCGTACTTTATTGAAAGAGATCGACATCGAGGTCCC
TACCATGGAGCAAAATCTAGGCGCGCTCCGGCGGACGTTGGACCGCTCCC
TTGGCTCCACGCTCCTTAGCTTCGAGAAGCTTCTGCAGCACTATGAAAGC
CGATCGCCAGAAGCGGACGTCCTTTTATCTGTGGCCCGTAAGCGTGTCAC
AAAATTGGTGCGCCACGGCCTCCATCAACTCATGACCCCCACCGCCGTCG
AATGGGCCATCTACGCCGTCAACAGCACCGCTCTCTTGGTGGAGGAGGAA
GCTGCCCGGGTATTGGCCGCACAAGAAGGCTCGGCGGAGAACAGCTTGGA
CGTTCCGAGTTTCCAAGACATGCAACGGGAAGTGATGCGACGCATGGTGG
TGGTGGCGGAGGACGTGGAGGCCTTGGCGCAGAACGTGATCCAGAACCGC
TGGTTTCGGACCGGCTACAGCGACGAAGAACTGAAACAGTTGGAGGCGCT
CTTGCATGCCCGGGTGGTCCCTCGTTTGCTCCTGGCCGTGGCGGCTGCGG
TGTTGCATGGCTGGCGCCCTTTACAAGACCCGCTCCTGACCCTCCTCGTG
GTGGGTTTTGCCTCGGGAAGCCTGAGCAAAAGCGTGGCTGGGAATCTTAT
GGAACTCTTCGAAGCTTCGTTGGTGGTGAAGGACGGGTGGGAGGGGAGCG
GGAAGGAAGGGGAGAGGATTGTCGAGTCTTTCCCGGACGTCTGGAGGACC
CGCGAGACGGCCGCTGAGATTGGCGAGGCCCTCTTCCGCCTCTTCGAATC
CGTGGAACGCCGCAGTGCCATCCGGGTTGAGGCCCGTCAGGCCCGGGCTA
GGGCGGCGGCATCGGCGGCCACTGGATCGATTGTAACGGGCACTGGAACC
GCAGCGCTCCCTGACGAATCGAGTCCTCCAACGCACGTGGCCATCCCCCC
TACTCCCGCATCCACCTCTCCCAGCTCCTTGCCGCCGGCCCCCACTTCTC
TGCCATCTTCCTCTCACGCTCCATCGACCCCTTTGTCCGGGGAGAAGAAA
TTCATGGTTGCTTCCTATGCCTTACCCAACAAACTCACCTCTTTGTCGGG
GGGCGCCGGCCCCCAGGCAGAAAGGGAGAGAGGACGGGATTCCGTATACT
ACCCGGCCTTTGAGAGCACGCGTCGTGGCAAGAGACTCCGCTACCTGGTC
ACGACGGTACATTTGACCCGTACATATTGGAAAACGGCCGCGACGGCCAT
GCTAGGGACCATGGGATTGGTCTTCCTCGCGCGGTTGTACGGCAGCCCTG
TGGAATTGACGATTGGTGGAGATGAAAGGGTGGAGGGACGGGAGGACAGG
AGAGAAGGACGAGGGAGGAGGCGAAGGGATGAGAGAAGGGATGGTTTGTT
GTTCAGTACACCTTTGGAAGTGCTCGAGGAGGAGTGA back to top
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