Naga_100153g11, gene8266 (gene) Nannochloropsis gaditana

Overview
NameNaga_100153g11
Unique Namegene8266
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:173801..178902 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100153g11
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:173801..178902 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL068ngnoL068Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL067ngnoL067Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G00560NO20G00560Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8528rna8528-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8528rna8528Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8528

>rna8528-protein ID=rna8528-protein|Name=rna8528|organism=Nannochloropsis gaditana|type=polypeptide|length=1575bp
MDEEENNINNDEEVIASFPGLKPSPKTQLRAQLKEASKALMMEHEYIHRL
EEALAAHGVKDFEALRENLGHSTSKFSSFQLHSPHCHLHEHSSGLASRMI
PTAPSSPPPPEHLPTLGNNLSYSAAGSMLQHYRSPSQLTRPDYTEIFDTS
NCVHPPKLIRSESVYAHATEVRFDDLNYSVQQQSTSGTTLTVGAQCLKMW
SWPFTCLLRNNQQRQQASFHILKDLRGVLLPGRLTLLLGPPGSGKSSFLK
ALAGRVKRTRTSVLKGRVTYNGDTAESHRFSLPKVVAFVSQDDCHASTLT
VQETVQFAYDCMNGPQAKIGLPSRLRNPLPSHRELAKHLLQEQEAASSSS
APSASICAPSSTLGSERYGANKRNGKVEQTLRVLGLSRCQHTIVGNTLCR
GISGGEKKRLTTAEMTGGQVNVLLMDSISTGLDSAATFDICKTLSGCTRA
LQANIVVCLLQPPPEVFDLFDDVILMDAGHIVYQGPRELILDHFENLGFR
RPLRKDVADFLVEVTTSAGAEFIIPAAQRYAAGIPDPPTSTEEFVRAFQE
TEIYEHMIDNLERPPSFAPWLRRQRCEFSNGWFRSTWLCLQRQARITLRD
RVFLRGRIMQVLLMGAMAGTLFYQLDAHDWSDKVCMLFFSLMFITLGNLA
TIPTVMEQRAVFYKQRDAGFFPTSSAVVAQMLVQIPIQFVETMVFTSLAY
FLSALSRADYGAFYLTYVLVAFSTALGIGQIFRLVVHLVPSLAQAQPICS
LFVLLFVVFSGLTIKGEDIPFYWTWLYWINPLAWGLRALAVNEFSSPTYS
QHIIYPPPVPRAIPCDPRRPEALLQYTGSNGPFQCLSEGEIYLINLGFKT
KRDWIVYGVLFLLALWSVMLMLTMLAMRLIRWTGQGAAPVPSAAKREELA
ATEDENPGYKEKDLNEGPAVGASGAGYDAFSYELLSDADPEKALGHQSMG
RRPKHPTGDSLTFQPITLVFKHIWYSVELPKPQGGGKERVELVKGVTGYA
RPGSLTALMGSSGAGKTTLLDVLAGRKTTGCIIGEILVNGFPKEQRAFSR
VMGYVEQTDVHSPHSTVREALLFSATLRLPYTQVTAAQREVFVEDMLALL
ELSGIADRVIGEDAGSGLLMGERKRVTIGVELVANPSVLFLDEPTTGLDA
AKAFEVMRSVKKIAASGRSVLCTIHQPSCAIFEMFDMLLLLRHGGRTVYF
GPLGKRSKDLINYLEAVPGVIPLRTGGVNPANWMLECIGAGIEPAAQPLD
FAEYYRDHALARRNEEICDSLSRPFDSHGHGLEPIAFDSRYAAPLKVQLR
ACMAKAIKNYWRSPNYNFTRMFISVLVAVVFGSVFHDKPYDTETDIVGRV
GLMYLSTSFVGIVNMMSVMPVMAKERAAFYREQASSMYSVFAYGVSYGLV
ELPYIFVSTGLFINVFYWFIGLAAEPFSKFVYYWVFFALYIVCLVFIGQF
LICLLPNQQTAQVAGASIAAIMNLFGGYLCTPRTITPFWKFVYYLVPSHY
MLEGLVMSQFEGDSTPVQPIYGLQATPADQYIYDHFGGEFTYGAKWKDIG
VLLLYISLLRIGTFVVMTFVRHINR
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Synonyms
Publications