rna8504, rna8504 (mRNA) Nannochloropsis gaditana

Overview
Namerna8504
Unique Namerna8504
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1102
Alignment locationKK037249.1:118863..119746 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100621g1.6227.mrna
Orig protein idgnl|cribi|Naga_100621g1.6227
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:118863..119746 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100621g1gene8242Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna8504rna8504-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22198.1cds8477Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna8504 ID=rna8504|Name=rna8504|organism=Nannochloropsis gaditana|type=mRNA|length=1102bp
TTCCCAGGTCGACGAACGTGTATTTCGCGAGCTCCTCTCCCCTGTCCTCT
TATCTTCAGGTCTAGCAGGCTTCCACCACTCCAAATGCGGCAATACCCGC
GAGGGTGCCGCCCTCTTTTACCGGCTGGAGCGCCTGGCCTGTATGGGCAC
GTTTGACTTCGAGATGCGGGAAGCTTTCGACAGGAAAGATAATCCTTTCA
AGCCCCTCCAAGACCGCTATCCTGCACTTCGCGCCATTTTGTGTGAAAAA
CTGACGACGGTCGGACAGATCGTGCTTTTGCGTCTCGAGGAGGAGGAGGA
GGACGGGCAAGAACGCCTCCTGCTCGTGGGGAATACCCACCTGTTTTATC
ATCCCATGGCGCAGCATATCCGGCTCATGCAGATGGCCACCCTGGTGAGA
GAAATGACTGCCCGGCAGGGCGAGATCGAGGACAAGTTCGGCGTGCGACC
TCGTCTGGTCCTGTGCGGCGACCTGAATAGCACCCCCACTACCGCCACGA
TCCGCTACCTGCGCGGGGAGACGATCGGCCCGGAGGACGAAGTCTGGGAG
CACCTCCACGTCTTCGGGTGGGGCAAGCGGCAAGGCGAGGGAGAGGAAAA
GGAGGAAGGGGAGGCGGCAGCGACGGCGGCGGTCCTCGAAGCAGAAGAGG
GAAAGAAGGGCGGGGAGGAGGGAGGGGATGGGAAGGCTGTAGCGGTTGAT
GTTGGCAGGGAGAGTAGGGGAAGAGAGACTCTCCTTTCCAGCCGCGCGAC
GCCGCGAGTGGAGGCGCGGGAAGAAAAAGAGAAGGAGAAGAACTCTAAGG
AGAAAGGGAGCATGGCCTCAGACGGGGACGTGATCCCCACGCTGTGCTTG
ACACGACCTTTTTTCAGTGCCTGTGGCTTACCCGACTTCACGAACTACGT
GCAGGGCTTTGTCGAGACTTTGGATTACATTTTCTTGGAGTCGGAGGCCC
CAGTCCCATTGGATCCCTCCGGTGCGAGCTTCTCCGTGCTGTCGGTAGGC
GCCATGCCGACCAGGGAGGAGGCGGGTCAGGACACGGCGTTGCCGTCCTG
GCAGACGCCCTCGGACCATGTGAGCATCCTTTGCGATGTCCGCGTGGAGT
GA
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protein sequence of rna8504

>rna8504-protein ID=rna8504-protein|Name=rna8504|organism=Nannochloropsis gaditana|type=polypeptide|length=140bp
MREGPPGKSGGSATGRTGGRHSFEASWHALVALTTIAPCLNTRDLRARYS
HSSKTGRGLACEQEVRARGGSTEVLSCLPASLPPFLPPSLDVSVVLPARP
EDKRTGERSSRNTRSSTWEGGKEGGSEGGYRILESRGTWG
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mRNA from alignment at KK037249.1:118863..119746+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna8504 ID=rna8504|Name=rna8504|organism=Nannochloropsis gaditana|type=mRNA|length=884bp|location=Sequence derived from alignment at KK037249.1:118863..119746+ (Nannochloropsis gaditana)
AACGGTAAATGTTACCTTGAAAGGATTATCTTTCCTGTCGAAAGCTTCCC
GCATCTCGAAGTCAAACGTGCCCATACAGGCCAGGCGCTCCAGCCGGTAA
AAGAGGGCGGCACCCTCGCGGGTATTGCCGCATTTGGAGTGGTGGAAGcc
tgggcgtggcggagaaacacCAGGGCTCGTGAAAATGAGAGAGGGTCCTC
CAGGAAAGTCGGGGGGTTCAGccacggggaggacgggtggaCGGCATTCA
TTTGAAGCTTCCTGGCATGCCCTGGTTGCTTTAACGACGATCGCACCATG
CCTTAATACCCGAGACTTGCGAGCACGTTACAGTCATTCCTCAAAAACGG
GCAGAGGCCTGGCTTGCGAACAGGAGGTGCGTGCACGCGGAGGCAGCACA
GAGGTACTTtcttgcctccctgcctccctccctcccttcctccctccttc
cctcgacgTGTCCGTCGTCTTACCTGCTAGACCTGAAGATAAGAGGacag
gggagaggagctcgCGAAATACACGTTCGTCgacctgggaaggagggaag
gagggagggagtgagggagggtaTCGAATCTTGGAGAGTAGAGGGACGTG
GGGATGACAATGGCGGTTGCATCCTGAGTGGAAGGCAAAAGGAAGCATGA
GACGGATTCCATCCCAGAataaaaaagggaaagaaaaggaaaaggaagga
ggggaggaaagaggggaggaaggggggagggaaggcttaCCTCTTGGAGG
CAGACCAGGTCCGGAGAGTAGGAGAGCAGCTCTTTGAGGGTAAGGAGGCT
CCGGTACTCGGATTGCAAGTGGCTGGGATCCACGTAGGGATACAGGTGGG
TCTGAGCCCAGGCGGAGGTTGCGTAactgggtgg
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Coding sequence (CDS) from alignment at KK037249.1:118863..119746+

>rna8504 ID=rna8504|Name=rna8504|organism=Nannochloropsis gaditana|type=CDS|length=423bp|location=Sequence derived from alignment at KK037249.1:118863..119746+ (Nannochloropsis gaditana)
ATGAGAGAGGGTCCTCCAGGAAAGTCGGGGGGTTCAGccacggggaggac
gggtggaCGGCATTCATTTGAAGCTTCCTGGCATGCCCTGGTTGCTTTAA
CGACGATCGCACCATGCCTTAATACCCGAGACTTGCGAGCACGTTACAGT
CATTCCTCAAAAACGGGCAGAGGCCTGGCTTGCGAACAGGAGGTGCGTGC
ACGCGGAGGCAGCACAGAGGTACTTtcttgcctccctgcctccctccctc
ccttcctccctccttccctcgacgTGTCCGTCGTCTTACCTGCTAGACCT
GAAGATAAGAGGacaggggagaggagctcgCGAAATACACGTTCGTCgac
ctgggaaggagggaaggagggagggagtgagggagggtaTCGAATCTTGG
AGAGTAGAGGGACGTGGGGATGA
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Synonyms
Publications