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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100960g2.2400.mrna |
| Orig protein id | gnl|cribi|Naga_100960g2.2400 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:652903..654296 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8426 ID=rna8426|Name=rna8426|organism=Nannochloropsis gaditana|type=mRNA|length=923bp
CGAGACTTGTGAGGCCCATGAGTCCACCAGAGTGCAGCCACGGTACAAAA
TGCATGACGAGTGATAACCTCTAAAAAGTGCCAAAATCGGCGCGTTTGGA
CTGGTTGCCGTCTATTCGTTTCTGCGTGCGCCTAGGGTAAGGTTGGAAAA
GACTTTCAATATTAGAGTCTGCCCGACTCGGAGGTGCCTGATCACGGAAA
ACAAGTATACTTGTGCTTTTACGACTTCCCTCGCGAACATACTACTAAGC
ATAAATTTGTCTCTCCATTTGCAATAGAGAAGTCTCGCCTCTCATGATCA
CGGTCTTAATAATACATGAAACAGACAGAAAAAAGTGATGCAAACATCCC
TTAGAAGTACATGACTTTTCAATATACGATAGCTCCTTTGACTATACCTA
GCACAGATGGCTAGAGATTTACATCATGTTGAAGGTCCTATATGGATCTC
TTCGCCTGATGATGGGATGCCTACAGGTCGTAAAGGAAAGGCTCGGTGGA
TGGAGGGGACTGCTACGCTCCGTCGTGCTATGGAGCTACATACAAAGCAT
CCCATGCTGGAGTGGAAAGCGAGCGGGAAAAAGACAGAGAATGAGGATCC
AGGGCCAACCCACAAAAGTGAAATCTCTCTCAAGCTCGTTATTGGCAAAG
TGCACAACGAGATCCACGTCGCTCAAGAGGAGGGAACAAGGACACTTGGA
TGGTGGCCACGGAGGGCTTCCTCTCTCGCCGCTTCTTCTCCCACTCGTCC
TCGGACATATTTCGCGGTCGAGGCTTATGAGGCCCAAACCTTGAAATCCG
CACTCCGGTACAACCTGGCACTGTCTCCACCGAAAACTTTTTTGCTGGGA
TTTGCCTCAGAAAACGAGGCGAGGGCATGGCAGGAAGCAAGCAGTACTGC
GAACAACACATGGAGCAGAGGAC back to topprotein sequence of rna8426 >rna8426-protein ID=rna8426-protein|Name=rna8426|organism=Nannochloropsis gaditana|type=polypeptide|length=392bp
EVKKDHPMAVEEPKKKQAQGTGRKACGPLPGQEPTPSNLPPSSRTLSTAP
SSMPPMHHLPCPGNRYCHDTKGLLLPPSPSSSSTLAGLQKRLAALHEADH
SRRLTALKGIARVTDEASLRARYEALKNGGSERGREGKVPGGGSRPDVVS
ERESTTAACQSTTAACLVNEEEQINELLARMTQEVRLQGSDGRGKGEEEG
EEEGGIDGAALASWAEEGEAGGQRRADAWETMKKKNSCGTVDCADCVERP
SWQSKPLGEVIASLQEEAQTLRGERRDAVGRTAVDPTTPVENEEGEAADK
GVSNSGLRTGGSIHIEGEEDEGPQLLGKCAALLKDVVQGFEGKDAVAETI
TLHDLVEVKGKGELGEEGDDSQVAAVMELAHLWAKEGCDGHT back to topmRNA from alignment at KK037248.1:652903..654296+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8426 ID=rna8426|Name=rna8426|organism=Nannochloropsis gaditana|type=mRNA|length=1394bp|location=Sequence derived from alignment at KK037248.1:652903..654296+ (Nannochloropsis gaditana)
GAGGTTAAAAAAGATCATCcgatggcggtggaggagccgAAGAAAAAGCA
GGCGCAAGGGACAGGCCGCAAAGCGTGTGGGCCCCTTCCCGGCCAAGAAC
CCACCCCGtcgaacctccccccttcctcgcgtaCCTTGTCAACAGCTCCC
TCTTCTATGCCCCCAATGCATCACCTGCCTTGCCCGGGAAATCGATATTG
CCACGACACCAagggccttcttcttcctccctccccgtcctcctcttcca
ccctcgcGGGCCTACAGAAACGTCTGGCTGCGCTGCATGAGGCCGATCAC
AGTCGTCGGCTCACTGCCTTGAAAGGGATAGCTCGAGTCACAGATGAAGC
CTCTTTGCGAGCACGGTACGAGGCCCTCAAAAATGGCGGGAgcgaaaggg
ggagggaggggaaggtgccggggggggggtcaaGGCCTGATGTAGTATCT
GAGAGGGAGTCCACGACAGCAGCCTGCCAGTCCACGACAGCAGCCTGCCT
TGTGAATGAAGAGGAGCAGATAAACGAGCTGTTGGCCCGAATGACGCAGG
AGGTACGCTTGCAAGGAAGCgatgggcgggggaagggggaggaggaaggg
gaggaggaagggggtatTGATGGGGCTGCCCTCGCGTcgtgggcggagga
gggagaagccggCGGACAGCGGAGGGCAGACGCATGGGagacgatgaaga
agaagaataGCTGTGGGACGGTAGATTGCGCTGATTGTGTAGAGCGTCCA
TCATGGCAGTCAAAACCTCTTGGAGAGGTCATCGCGAGCTTGCAAGAGGA
GGCACAAACACTGCGTGGAGAGAGACGTGACGCTGTAGGAAGGACTGCCG
TCGATCCAACGACACCGGTAGAaaacgaggaaggggaagcagctGATAAA
GGAGTTTCCAACTCGGGACTTAGGACAGGGGGCAGCATTCAcatcgaagg
ggaagaggacgagggtcCGCAGTTGTTGGGCAAGTGTGCAGCGCTCCTTA
AAGATGTGGTTCAGGGATTCGAAGGTAAGGATGCTGTCGCAGAAACAATC
ACATTGCATGACTTGGTGGAAGTAAAAGGTAAAGGGGaattgggagagga
gggagacgattcgcaggtggcggcggtgatgGAGCTGGCACATCTATGGG
CTAAAGAAGGGTGTGACGGTCACAcataaggagggagaagtatACGGCCG
ACGAATTGTTATGCAACCCCAAAAAAACAGTTTTGGAGGCTTCTttaaag
gggaaaaaaaaaaaagccTCTGATGGGGATGTCTTTACTCATAAAATGAG
GCAAGAATTAAATCAAGGCAAAAGGGCCCAGATTTGCTGCCACGTGCAAT
AGCCTCCCGACTGTTGCCTCTTCGACTTATCATGTCCAAAATCC back to topCoding sequence (CDS) from alignment at KK037248.1:652903..654296+ >rna8426 ID=rna8426|Name=rna8426|organism=Nannochloropsis gaditana|type=CDS|length=1179bp|location=Sequence derived from alignment at KK037248.1:652903..654296+ (Nannochloropsis gaditana)
GAGGTTAAAAAAGATCATCcgatggcggtggaggagccgAAGAAAAAGCA
GGCGCAAGGGACAGGCCGCAAAGCGTGTGGGCCCCTTCCCGGCCAAGAAC
CCACCCCGtcgaacctccccccttcctcgcgtaCCTTGTCAACAGCTCCC
TCTTCTATGCCCCCAATGCATCACCTGCCTTGCCCGGGAAATCGATATTG
CCACGACACCAagggccttcttcttcctccctccccgtcctcctcttcca
ccctcgcGGGCCTACAGAAACGTCTGGCTGCGCTGCATGAGGCCGATCAC
AGTCGTCGGCTCACTGCCTTGAAAGGGATAGCTCGAGTCACAGATGAAGC
CTCTTTGCGAGCACGGTACGAGGCCCTCAAAAATGGCGGGAgcgaaaggg
ggagggaggggaaggtgccggggggggggtcaaGGCCTGATGTAGTATCT
GAGAGGGAGTCCACGACAGCAGCCTGCCAGTCCACGACAGCAGCCTGCCT
TGTGAATGAAGAGGAGCAGATAAACGAGCTGTTGGCCCGAATGACGCAGG
AGGTACGCTTGCAAGGAAGCgatgggcgggggaagggggaggaggaaggg
gaggaggaagggggtatTGATGGGGCTGCCCTCGCGTcgtgggcggagga
gggagaagccggCGGACAGCGGAGGGCAGACGCATGGGagacgatgaaga
agaagaataGCTGTGGGACGGTAGATTGCGCTGATTGTGTAGAGCGTCCA
TCATGGCAGTCAAAACCTCTTGGAGAGGTCATCGCGAGCTTGCAAGAGGA
GGCACAAACACTGCGTGGAGAGAGACGTGACGCTGTAGGAAGGACTGCCG
TCGATCCAACGACACCGGTAGAaaacgaggaaggggaagcagctGATAAA
GGAGTTTCCAACTCGGGACTTAGGACAGGGGGCAGCATTCAcatcgaagg
ggaagaggacgagggtcCGCAGTTGTTGGGCAAGTGTGCAGCGCTCCTTA
AAGATGTGGTTCAGGGATTCGAAGGTAAGGATGCTGTCGCAGAAACAATC
ACATTGCATGACTTGGTGGAAGTAAAAGGTAAAGGGGaattgggagagga
gggagacgattcgcaggtggcggcggtgatgGAGCTGGCACATCTATGGG
CTAAAGAAGGGTGTGACGGTCACAcataa back to top
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