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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100933g4.1610.mrna |
| Orig protein id | gnl|cribi|Naga_100933g4.1610 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:587242..589054 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8407 ID=rna8407|Name=rna8407|organism=Nannochloropsis gaditana|type=mRNA|length=1128bp
AGCCTCCGGCTGGCTCTCCTTGCCTCTTTGAGGTTGCTGATATTCTCATC
TTTTCCCCGTGCACACAATATAGAGACTCCATACCGCACAGTCAACATGC
GAGTCCTCCCGTATGTCTTCACGTTAGTATGTGCGGTGCCCGCTTTCGCT
TTTATGCCCCCCACCGTCTCTCACCCGCGAGGCATTACTATGAGCGCAGA
GATGGGACAGGACCGCCGAGATGTTGTCAAGAGTACCTTTGGCTTCGCGA
GCGTGCTGGGTGTCTTGGCATCCCTTTCGCCCTCCTTTCCCGCACAAGCC
GGGTATTTGAACAGCGATAAACTTCCGGAAGTGATCAAGCCCTCGGACGC
CGAGGTGGACCAGGACATTTTGAAGTCCTCCGAGGTCCAAAATGAGTTGA
AGGCCATCCGAAACTATAAGGAAGGGGTATCAAGTTTGAGGTCTGAATTA
GCCGGGAACGCACAAGTGGATTTGTACTCTCGCGTACGCAAGGACTTGGA
CGTCTCCTCCCTCCGCGACTCGCTCAACAAAGTGAACACGGTCTTCTCCG
AAGACACTCAGCGAGGCACGGACCGGATCGTCCGCATCATCTTGCAAGAC
GTAAACGAGCTAGAGGCGGCGACGCGGCAGCGACCCGGGACCCAACGTTC
GGACACCAAGCTGAAACTGATCACCAAAAAGCTGAAGAAGCTCGATGCGG
CCTTCGCTGAATTGTTGACGTACTTTTAAGGTGGCGGCCCGGGACTCAGG
ACCCACGTCGGAGGCTCTTCCAGGGTCGAGCCATGCCGTTTACGAGGAAA
CGACGTCGTCCGCGCGGTGGAAGCAGGGAGCAAGCAGGGCGGGGAAGAAA
GCGGAGGGGCGTCACGAGGAACAACACGTGCTTGTGGGACGGTCCCACAT
CGAAAGTGGTCGAAGGGGGGGGTTAGGGTCCGAGGGCAATGCTGGCACGC
TTGGGTACGAAAAAACGACCTTTTCGGGCGCGGAAGCAGACAAGGTGCGA
ATGCCGCGTGCGCGTGCAGAGGGGGGGCGATGTCCTGTAGGAACCTTGTG
GAATGAGAGGAAGGACCGGGGGCCCAGCAATGACCCAACCGGCGAGAAAG
CAAACCAAGCTATCGTCAGAAGCGTCCC back to topprotein sequence of rna8407 >rna8407-protein ID=rna8407-protein|Name=rna8407|organism=Nannochloropsis gaditana|type=polypeptide|length=364bp
MPSARINSRCRPHVETRTWPAMKRRGIQLGKGRRTWSRSSLSTEVGVEPC
VLRPGNPLYSMFFPATSPVVFPFSKRNNMGCTLSCDSSLLTLPPSPLLLA
LLPSLPRVLHHGVSQPWPRGVNFPESCPPSDGIVALSATTPTVAGTAPSP
RMYLPVRTAQRRILRTCWRCTSALKAGGTSWWGTRLALRRRCGWRLSWKE
SCKGRSARPRTETPQLHLLKKLKSQKSLPFHPMRIVSTPSRKTTVDAACP
RPSPLNRPPSSTGTARLLPPPWQQASPSAAAPPPPPRLLPRPPPLPPSWA
SSSLPPPTTCPTEGVPSSTSPSPSSTSFNPSSRRSSGARPSTDTPTPPSG
RSRRGAVRVRKGKE back to topmRNA from alignment at KK037248.1:587242..589054+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8407 ID=rna8407|Name=rna8407|organism=Nannochloropsis gaditana|type=mRNA|length=1813bp|location=Sequence derived from alignment at KK037248.1:587242..589054+ (Nannochloropsis gaditana)
ATCTGTTCCCACGGCATTTTATTCGTACCCAGATCAGCGAGCGCGATTTA
AAGCGGGACGGAGACGAGACGTCACGCATATGGCAGGAGGCTGTGGCACT
GAAAAAAGTCTTCAGAATTCGTGTAAGCACCCTTTTATTTTATCTGAGCT
GGTGGAACGCGCATGTTTCAGGAATGTCAGTCGTGTTTTGTTCGTGCTAA
GATTCTCATGATTCTCACGAACAGGTACCGGTTTGGCAAGGCTTCTATTA
TGCAGCTGTGAGGCATATTGTTCCTCATTCCGGGCTACCTCTGCGTCAAT
TATTAATTGCATGCGTATCTGTTTCCCAAAAAATTAAGATAAACTGTTGT
TTAAAAAAAATTTAAGATAACCTCCTCAGTTCGTGCACACTTATATCAAA
CATTGGAAACGTGCGACACAGCAGGGTTTTGCCTCACGCCTGGCCTCACT
GTTGAGCAGTGCGTTTCTGAACGCATAGCTtgctccacttcctcctcatt
cccctTATTCCTTATTTACCTCCTTGGAATCCTTCCAGATGCTGCGATGG
AAGACGAGACGTGCCCGCAGCGACTCTGGGGTCGACCCCATGAGGAAGAA
ACCCTTCCTCCAGTGCAGCTGGTGACGCTGAGGCCCCGGTCTGGATGTTC
GGGGGCGGTGTCTCCACGCGCGGTGAGCCTGCTGGAGATACCGTGTCGTC
CCCACCATCGACGTCACCGGAATGCCCAGCGCCCGCATCAACAGCCGTTG
TCGCCCCCACGTGGAAACGAGGACATGGCCGGCGATGAAACGCAGGGGGA
TACAgctggggaagggacggaggacgtggtcacGATCTTCCTTATCCACG
GAGGTCGGTGTCGAACCCTGCGTTCTGCGCCCGGGCAATCCCTTGTACTC
CATGTTTTTCCCTGCCACCTCTCCAGTagtcttccctttctcgaAAAGGA
ACAACATGGGGTGCACCCTGTCGTGtgactcttccctccttaccttaccc
ccctcacccctccttcttgccctcctcccctccctccctcgcgtcctcca
tCATGGGGTTTCCCAGCCATGGCCACGTGGCGTCAATTTTCCCGaatcct
gccctccctccgacggCATTGTCGCGTTGTCTGCTACGACGCCTACGGTT
GCGGGGACAGCCCCAAGCCCGAGAATGTACCTCCCAGTGCGTACAGCACA
GAGGCGCATTTTGAGGACTTGCTGGAGGTGTACCAGCGCTTTaaaggcag
gaggaacgTCCTGGTGGGGCACTCGTTTGGCTCTTCGCAGGCGATGCGGT
TGGCGGCTGTCGTGGAAAGAGAGTTGCAAGGGCAGAAGCGCGAGGCCCAG
GACGGAAACACCCCAACTCCACCTTCTCAAGAAGCTCAAAAGCCAGAAat
cgcttccctttcacccCATGCGAATCGTATCCACCCCTTCCCGCAAGACG
ACAGTGGACGCCGCCtgcccgcgcccctcccccttgaaccgccccccctc
ctcgacgggcaccgcccgccttcttcctcctccttggcagcAAGCCTCgc
catcagcagcagcaccacctcccccgcctcgcctccttcctcgtccccct
cctctccctccctcctgggcctcgtcctccttgcctccgccTACCACGTG
CCCGACGGAGGGAGTCCCgtcttcaacctccccctccccctcctccacct
cattCAACCCCTCCTCTCGCAGGTCTTCCGGAGCAAGGCCATCGACCGAC
ACGCCGACCCCGCCGTctggaaggagcaggcgcgggGCAGTCAgggtgag
gaagggcaaggag back to topCoding sequence (CDS) from alignment at KK037248.1:587242..589054+ >rna8407 ID=rna8407|Name=rna8407|organism=Nannochloropsis gaditana|type=CDS|length=1092bp|location=Sequence derived from alignment at KK037248.1:587242..589054+ (Nannochloropsis gaditana)
ATGCCCAGCGCCCGCATCAACAGCCGTTGTCGCCCCCACGTGGAAACGAG
GACATGGCCGGCGATGAAACGCAGGGGGATACAgctggggaagggacgga
ggacgtggtcacGATCTTCCTTATCCACGGAGGTCGGTGTCGAACCCTGC
GTTCTGCGCCCGGGCAATCCCTTGTACTCCATGTTTTTCCCTGCCACCTC
TCCAGTagtcttccctttctcgaAAAGGAACAACATGGGGTGCACCCTGT
CGTGtgactcttccctccttaccttacccccctcacccctccttcttgcc
ctcctcccctccctccctcgcgtcctccatCATGGGGTTTCCCAGCCATG
GCCACGTGGCGTCAATTTTCCCGaatcctgccctccctccgacggCATTG
TCGCGTTGTCTGCTACGACGCCTACGGTTGCGGGGACAGCCCCAAGCCCG
AGAATGTACCTCCCAGTGCGTACAGCACAGAGGCGCATTTTGAGGACTTG
CTGGAGGTGTACCAGCGCTTTaaaggcaggaggaacgTCCTGGTGGGGCA
CTCGTTTGGCTCTTCGCAGGCGATGCGGTTGGCGGCTGTCGTGGAAAGAG
AGTTGCAAGGGCAGAAGCGCGAGGCCCAGGACGGAAACACCCCAACTCCA
CCTTCTCAAGAAGCTCAAAAGCCAGAAatcgcttccctttcacccCATGC
GAATCGTATCCACCCCTTCCCGCAAGACGACAGTGGACGCCGCCtgcccg
cgcccctcccccttgaaccgccccccctcctcgacgggcaccgcccgcct
tcttcctcctccttggcagcAAGCCTCgccatcagcagcagcaccacctc
ccccgcctcgcctccttcctcgtccccctcctctccctccctcctgggcc
tcgtcctccttgcctccgccTACCACGTGCCCGACGGAGGGAGTCCCgtc
ttcaacctccccctccccctcctccacctcattCAACCCCTCCTCTCGCA
GGTCTTCCGGAGCAAGGCCATCGACCGACACGCCGACCCCGCCGTctgga
aggagcaggcgcgggGCAGTCAgggtgaggaagggcaaggag back to top
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