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Properties
| Property Name | Value |
|---|
| Product | coatomer protein subunit gamma |
| Orig transcript id | gnl|cribi|Naga_100465g4.10752.mrna |
| Orig protein id | gnl|cribi|Naga_100465g4.10752 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:565665..567631 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8394 ID=rna8394|Name=rna8394|organism=Nannochloropsis gaditana|type=mRNA|length=3327bp
ATTACATTACAGTCGTCCGACTCACGAAAATTTGATCTGTCATGAACGCT
TAGCTAGGGAAAGACCTATCCGACGCGCCCATGAATGGACGGTGCAACCG
CGTTTTTCCGTAGTAAGAAAGGTCATGCTGGCTTTTCCCTCTCTCTTCTC
CTCCACTGGGTCAATACGCTCCCTCCCCGCTCTTGCCTCCTTATCAGCCA
GCCCGTGGACATTTACGACGGACGTGTCTTACGTGACATATTGGTGCAGT
GCTTCCTGCCGCCGCAGCATGAAGGGAAGGATTTGGGCGAGGCCCTACAT
CTCTTTCATGCCTGTTACCACGCGCAGGACCCTGCTTTGTTTGAATTCCT
TTACCAGCAAGAGGAAGGCGCGGTGACTAGTTCTGCGAAGCTTGGGGCAT
TGGTAGAGCGAATACGCGGCGGGGACAACGTGGAACTTGCCCGGCTGCTA
TCTGTGTTGCGGGTCTTGTGGGATCGGAAGAAGCTTGCAGAGACGGGGAA
ATCGAGGAACGAGCATCCCATGATGCCGGTGGAACGTGGACGCAGAGGAA
GAAAAGGGAAGGCAAAAGGGTCCGGCTGGGATAGGGATTGGGAAGAGGAG
AAGGAGCAGGCGGGCGGGGGGAAAAACGGGGAAGAGGGGGAAAGAGAGGA
GGAAATTGAAAAAGAGATGGAAGACGACGGAATGACCTCCTCCCAGAGCC
CCTTCCCCTCCAAATGCCAAGCCTACCTTTCGCAGGCATCATTTCATCGA
CCAGGAAGCCTTTTCTCAGAAGAGGAGGCAAAGATAGACGTCCTCTCTCG
TGCCGGAAGTCCTCGGCACTCTACCTCCCTGACACCACCTCTGAAAGCAG
AGGATCGCTCATTTGCAACGGAAGACGTGGTGCCATGCCATAAAGCGGCG
TCGCCAGCATCCCATGGAGGCCCCGCGGCCCCCGTGCCACCCTTCCCTCA
TCACAAAGGAAGGGAAGAGGTTGTCTCACCCACCCGGGCCCTCAGCTTCC
GGGAACGTGTGCTAGTCCATGCCTGGCTGCAGGGGCTCGGCCTTCCCGTG
AATTTGCCCCCTGTACCGGCGCCACCGGTCCTGGATCGATGGCTGCCGGA
GGATGTGAAGGAGGGGGTGGACGAGGGAGGGGGGAGGACCAGGGGCCGAG
CTCGCCGTCCCATCTACCTCTGCACCGGGATTCCTTCCGGAACGGTCGCT
TTCTCTGCGCCCTATTTCTTCGCCTCGAACCCGAAATTGCCGCGTGCACC
AAGGGTTTGCAGGAGCTCCTCTGCGAGGAAGACACCAGTCATTCTTTCCT
CCCTCCCTCCCTTCCTCCCTCCCCCCCTTCTTCCCTCGTGCGTGCCCGGG
AGCGCCTGGGGTGTGCCTTTTGGCTCTTCCGCTGCCGTACTTTCCCCTTG
ATTCCTCTCTGCTATTTCGAACGCGTCGAAGACGTCCTTCTTGGCGATAC
GACTGTCCTGTGGTCCCTCCTGTGGGAGCTGAGGAACATCTACAACCTTT
CTTCCCCTCTCCCTCCTTCCCTCCCTCCGTCTTCCCCGCCCTGCGCGCCG
GCTGGGCGGTCACACTCGATGAAATTGCCCTTCGAGCACGCAGGAAATGG
TACACGTGCACACGGAAGGGAGCCATGCGAAATCTCCCGGGAAAAGGATG
GGGCGACGCCCTATCCCCCGGGGGGTCAGCGCCCTGCACCCAGGGCGTGG
GCGCCGGGCCAAGGTACGGAGGCAGAAGGAGTACGGTCCGAGAAGACGGC
GAACGCAAGAAAATTCTGGAGTGGACGATGTGGGGTCCCAGCCGGGGGGG
GGCAAAAGGCGATGGGCGTGAGAGGGGCTTCGCCCACGCGCGGACAGGCC
TTGACAGGCGGTGATTCGACGGAAGGGGGAGGGGAAAGCCTCGGGGCGCA
GGATGGGATGCCATCAAAGGGGGCGGAAGGGGAACGTCCTCGGTGGGAAG
AGGAGCGAGCTCGGCGCCAGCGTACGGAGTCTGGGCAAGGGGAGGGCGGG
GGAAAGGGGGGAGGGGAGGAAGGAAACGACGCGGGAGAAAGCAGGGGGTT
CCCGGAAGACTTATACCCGCACCCGTACGGCCCATCCCCGTCATGCTCCC
CCGTGCCCACCCTCTCTTCCCTTCGCCCGCACGCCTTCTCTCCAGATCGG
GTACGAGAAGCTATCAGCTTTCACGGGGCAAGCGCCGGAGAAGCTTCGTC
GGGAGAGAGGGATGGAAGGCTGCCGCGGTCTATCCAGACTCCCCGCCATG
ACCAAGGGCAGCCACTATGGGCCCGTCCGCGTCATTGGCACCAAGAGCAT
TTACACGAGGAAGGGGCAAAGACACGACATACGATCTTAAGGGAGGGACG
AGCGCGTTCTGACGACCATGGGAGAAGCGCAGGGAGGGACCGGACGCCGA
TGGGAAAGACCATTTCCATGCGAGTTTCTCCCTCCCTCTCCCAAGAAGAT
GCCTCGGTATCCCCTTCTGCACCTTCGGCCGCGGCGTCTGCTCTCTCTTC
ATCCTATTCCTTATCTAGAGGAGCGAGCGTATCTGGACATGCCCTCCGGC
CTGACCGGCTCCCATGTCCTTTTCTCTCCGAATCCGAGCGCCGTGCTGCG
CCTTCTCCCGCCCTCTCTCCCTCCTTCGCCAGCCCCACGCTTGGCTACCC
TCCTTCCTCGCAGGATTTTGACCATTCCTTCCCTCCAGAGGCATTTACAC
GCCCTCTCACAGACTTTTCAGCCCCTCTCCTCCACGCTCAACCGATACTT
TCCCCCCGACTCTCAGAGGACGAGGCTTCCCTCCCTTGTCCAGCCCGTCT
TGGGAGCGCGGAGGCAGAAGATATCTTAGGCTGGCTTGGAGCCCATGGCA
TTGTGTTGCAGCAGCCTGAACGCTTGTTATTGTCCTCGTCTCAGCAGTCG
GATTGTCCGGAATTTTCCGACGGTCTGCTCTTGGCCCGCTTGCTCGGTCG
ATTGGAGGGATGGGGGGAGGAAGGGGTGGAGGGGATCGACTGGTCACCTG
GCACCGCGGTGGTTACCCGGCTGCAGAACCTGAAAAGGGTGTTGGACGTG
TGGAGGAGGAAGAGGAAAGGAATTCCCTTACACTTACTGCACCGGGAATT
CGACATCTTGGAAGGGCGGACGGATGTTTTGCTGCCGCTTTTGTGGCATG
TCCGCCGCGTTTATGATGAAGGTGATGGAGAAAGACCAACGGAAACTGGG
CTGTGAAGCATGCTGTCATGTTGAAATTCAAAATCAACTCTTGAAGAAAG
CACATCCATAAGAAAGATATCAGCACAGACTTGATAAAACGAAATTCAGA
GTGACTAGAAAGATCATAAGGCAAGAT back to topprotein sequence of rna8394 >rna8394-protein ID=rna8394-protein|Name=rna8394|organism=Nannochloropsis gaditana|type=polypeptide|length=201bp
PLGCLQELYSVAGVVPLPALPYGATPGSTYVVLRREADTVISPESLQCRL
LFNVVDIDPVSGEIEGEPSGFAEEYPLEALEINTSDYMAKVAPLGDFKKN
WEALGPEQEVMEHFQLQFKELQEAIVAVIDYLGMQACDGTAAMGKPGSST
HNLHLSGVFVGNRPVLVRAQLQADQAAGMVLKIAVRSEDLNLSQMVADCI
R back to topmRNA from alignment at KK037248.1:565665..567631- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8394 ID=rna8394|Name=rna8394|organism=Nannochloropsis gaditana|type=mRNA|length=1967bp|location=Sequence derived from alignment at KK037248.1:565665..567631- (Nannochloropsis gaditana)
CCCCTCGGGTGCCTCCAGGAGCTCTACTCCGTGGCTGGCGTCGTTCCTCT
CCCCGCATTACCTTACGGAGCCACACCGGGGAGCACCTATGTGGTCTTGC
GGCGTGAGGCGGGTAGGCGTCGAGAGAGGGCGGGCGGGAGGGCGGGAGGG
AGGGCGGGCGAGAGGGTTGCATATTTGAACACGAGTACATCGCTGACTTT
GTCGTTCTCCTCCCTCCCTCCCCGTCCTATTGCCTTCGTCCTCTAGATAC
GGTGATCTCGCCTGAAAGTTTGCAGTGCCGCCTTCTTTTCAACGTGGTAG
ACATCGACCCGGTCTCGGGCGAGGTAAGAAAGGAATGGCGAAGGAAAGGA
AGGAGGGGGAGGGGGGGGAAAAGCAGAGGAGGGTGTGTTCTGAATCTATG
ATGCTTCTTTTCCCCCTCTCCTTTGTGTCACTTTCACAACCTGTGCCTCG
CTTTCACGCGCCCTCACTTCTTCTTGTCGTAGATCGAGGGCGAACCCTCT
GGGTTTGCGGAAGAGTACCCCTTGGAAGCGTTGGAGATCAACACCAGCGA
CTACATGGCAAAGGTGGGTCTTTTTGCTTCCCTCTATCCTTCCTCTTCCT
CCCTCCCTCCCTCTCCTTCCCTCTTTCTCTTCTTCTTGCTCCCCAGCAGG
CCTGCTCCCTCTCCTCGTGTCAGAGCGGAGCAGATATCTTCCCCCAACCC
CTTTTATTTCTTTGTCATGATTGCTGTCAAAGAACTTCGCGGGGCCGTCC
GCCTTTCCCTGCTTGCTCACAATAATCTGCTTCTCTCTGTGGGGCAGGTG
GCTCCGCTTGGTGACTTTAAGAAGAATTGGGAGGCCTTAGGGCCCGAGCA
GGAGGTGATGGAGCACTTCCAGCTGCAGGTCAGGGGGATAGAGGGGGAAG
GAGGGACGTTGCGCGAGAAGAGTGGGGAAGGGAGAGCAGTCAGTGGGCAT
GTGGGTCCTATATGTCGCTTGTCGGTGATACTCATGTCTGACGCGTCTGG
GAAATTTCTACCTTGCCCCTCCTCCCTTGTCACCTCTCTGGCTCTTCTCT
CAGTTCAAAGAGCTCCAAGAGGCCATCGTGGCCGTGATTGACTACCTAGG
AATGCAAGCCTGCGACGGCACCGCCGCCATGGGGAAGCCGGGCTCCAGCA
CGCACAATCTCCACCTGTAGGACGGAGGGAATAGAGGAAAAAAAGGGCAG
GAGAGAGGAGGGAGTCCTTGAGGTGTCAGGGGCGACCCAAAAAATACCAA
TCCTCACGCTGACGTTTTATCCCCCTCCCTCGTGTTTCTGGCGACCCAGG
TCCGGTGTATTCGTGGGCAACCGGCCCGTGCTAGTGCGGGCCCAGCTGCA
AGCAGACCAAGCGGCAGGGATGGTGCTGAAGGTAAGGCGCCTACACGTCC
CGTGGGGCATTTCTTGTCTTTTTTCCTCCGTCTCGTGTCCCCCGTTTTGT
CCTTGTAACCGTTGCTTTCCCCTACTCTGCCTCTGGCTTATCCTTTTCGG
GCATTTGACCGTCCATGCCACAGATCGCGGTGCGGTCTGAGGACCTAAAT
CTGAGCCAAATGGTTGCTGATTGTATCCGATAGAGGTCGGGCGGTCCACA
ACATGCAGGGTAGGAAAGGAGAGGAAGAGAAAAACAGAGACTTCATTGGT
ACCGGGAGATCGGTCTGAGACTATGGAATCAACGTCGGGGAAACGGTCGT
CGTGTAGGCGAGAAAGGGGAAGGAAGACGAAGTAGGCTGAAGTCGGAGGA
ATGAGACGGGGGCGTCGTGCCTGTGGTGAGCTAAAACAGGCAGGCGAAGG
GAGCCATCACATGTACGAGTATCGTTGACGCCTTTGGAGCTTAAGGATAA
CTGTGGAAAGCTAAGCACGATGAAACGGAGGCCAGACAAGAAAAGAAAGG
AAGGGTGGGAAAGGGTCATTGAAACACATCTTGCCTTATGATCTTTCTAG
TCACTCTGAATTTCGTT back to topCoding sequence (CDS) from alignment at KK037248.1:565665..567631- >rna8394 ID=rna8394|Name=rna8394|organism=Nannochloropsis gaditana|type=CDS|length=4242bp|location=Sequence derived from alignment at KK037248.1:565665..567631- (Nannochloropsis gaditana)
ATCGCGGTGCGGTCTGAGGACCTAAATCTGAGCCAAATGGTTGCTGATTG
TATCCGATAGGTCCGGTGTATTCGTGGGCAACCGGCCCGTGCTAGTGCGG
GCCCAGCTGCAAGCAGACCAAGCGGCAGGGATGGTGCTGAAGTTCAAAGA
GCTCCAAGAGGCCATCGTGGCCGTGATTGACTACCTAGGAATGCAAGCCT
GCGACGGCACCGCCGCCATGGGGAAGCCGGGCTCCAGCACGCACAATCTC
CACCTGTGGCTCCGCTTGGTGACTTTAAGAAGAATTGGGAGGCCTTAGGG
CCCGAGCAGGAGGTGATGGAGCACTTCCAGCTGCAGATCGAGGGCGAACC
CTCTGGGTTTGCGGAAGAGTACCCCTTGGAAGCGTTGGAGATCAACACCA
GCGACTACATGGCAAAGATACGGTGATCTCGCCTGAAAGTTTGCAGTGCC
GCCTTCTTTTCAACGTGGTAGACATCGACCCGGTCTCGGGCGAGCCCCTC
GGGTGCCTCCAGGAGCTCTACTCCGTGGCTGGCGTCGTTCCTCTCCCCGC
ATTACCTTACGGAGCCACACCGGGGAGCACCTATGTGGTCTTGCGGCGTG
AGGCGGATCGCGGTGCGGTCTGAGGACCTAAATCTGAGCCAAATGGTTGC
TGATTGTATCCGATAGGTCCGGTGTATTCGTGGGCAACCGGCCCGTGCTA
GTGCGGGCCCAGCTGCAAGCAGACCAAGCGGCAGGGATGGTGCTGAAGTT
CAAAGAGCTCCAAGAGGCCATCGTGGCCGTGATTGACTACCTAGGAATGC
AAGCCTGCGACGGCACCGCCGCCATGGGGAAGCCGGGCTCCAGCACGCAC
AATCTCCACCTGTGGCTCCGCTTGGTGACTTTAAGAAGAATTGGGAGGCC
TTAGGGCCCGAGCAGGAGGTGATGGAGCACTTCCAGCTGCAGATCGAGGG
CGAACCCTCTGGGTTTGCGGAAGAGTACCCCTTGGAAGCGTTGGAGATCA
ACACCAGCGACTACATGGCAAAGATACGGTGATCTCGCCTGAAAGTTTGC
AGTGCCGCCTTCTTTTCAACGTGGTAGACATCGACCCGGTCTCGGGCGAG
CCCCTCGGGTGCCTCCAGGAGCTCTACTCCGTGGCTGGCGTCGTTCCTCT
CCCCGCATTACCTTACGGAGCCACACCGGGGAGCACCTATGTGGTCTTGC
GGCGTGAGGCGGATCGCGGTGCGGTCTGAGGACCTAAATCTGAGCCAAAT
GGTTGCTGATTGTATCCGATAGGTCCGGTGTATTCGTGGGCAACCGGCCC
GTGCTAGTGCGGGCCCAGCTGCAAGCAGACCAAGCGGCAGGGATGGTGCT
GAAGTTCAAAGAGCTCCAAGAGGCCATCGTGGCCGTGATTGACTACCTAG
GAATGCAAGCCTGCGACGGCACCGCCGCCATGGGGAAGCCGGGCTCCAGC
ACGCACAATCTCCACCTGTGGCTCCGCTTGGTGACTTTAAGAAGAATTGG
GAGGCCTTAGGGCCCGAGCAGGAGGTGATGGAGCACTTCCAGCTGCAGAT
CGAGGGCGAACCCTCTGGGTTTGCGGAAGAGTACCCCTTGGAAGCGTTGG
AGATCAACACCAGCGACTACATGGCAAAGATACGGTGATCTCGCCTGAAA
GTTTGCAGTGCCGCCTTCTTTTCAACGTGGTAGACATCGACCCGGTCTCG
GGCGAGCCCCTCGGGTGCCTCCAGGAGCTCTACTCCGTGGCTGGCGTCGT
TCCTCTCCCCGCATTACCTTACGGAGCCACACCGGGGAGCACCTATGTGG
TCTTGCGGCGTGAGGCGGATCGCGGTGCGGTCTGAGGACCTAAATCTGAG
CCAAATGGTTGCTGATTGTATCCGATAGGTCCGGTGTATTCGTGGGCAAC
CGGCCCGTGCTAGTGCGGGCCCAGCTGCAAGCAGACCAAGCGGCAGGGAT
GGTGCTGAAGTTCAAAGAGCTCCAAGAGGCCATCGTGGCCGTGATTGACT
ACCTAGGAATGCAAGCCTGCGACGGCACCGCCGCCATGGGGAAGCCGGGC
TCCAGCACGCACAATCTCCACCTGTGGCTCCGCTTGGTGACTTTAAGAAG
AATTGGGAGGCCTTAGGGCCCGAGCAGGAGGTGATGGAGCACTTCCAGCT
GCAGATCGAGGGCGAACCCTCTGGGTTTGCGGAAGAGTACCCCTTGGAAG
CGTTGGAGATCAACACCAGCGACTACATGGCAAAGATACGGTGATCTCGC
CTGAAAGTTTGCAGTGCCGCCTTCTTTTCAACGTGGTAGACATCGACCCG
GTCTCGGGCGAGCCCCTCGGGTGCCTCCAGGAGCTCTACTCCGTGGCTGG
CGTCGTTCCTCTCCCCGCATTACCTTACGGAGCCACACCGGGGAGCACCT
ATGTGGTCTTGCGGCGTGAGGCGGATCGCGGTGCGGTCTGAGGACCTAAA
TCTGAGCCAAATGGTTGCTGATTGTATCCGATAGGTCCGGTGTATTCGTG
GGCAACCGGCCCGTGCTAGTGCGGGCCCAGCTGCAAGCAGACCAAGCGGC
AGGGATGGTGCTGAAGTTCAAAGAGCTCCAAGAGGCCATCGTGGCCGTGA
TTGACTACCTAGGAATGCAAGCCTGCGACGGCACCGCCGCCATGGGGAAG
CCGGGCTCCAGCACGCACAATCTCCACCTGTGGCTCCGCTTGGTGACTTT
AAGAAGAATTGGGAGGCCTTAGGGCCCGAGCAGGAGGTGATGGAGCACTT
CCAGCTGCAGATCGAGGGCGAACCCTCTGGGTTTGCGGAAGAGTACCCCT
TGGAAGCGTTGGAGATCAACACCAGCGACTACATGGCAAAGATACGGTGA
TCTCGCCTGAAAGTTTGCAGTGCCGCCTTCTTTTCAACGTGGTAGACATC
GACCCGGTCTCGGGCGAGCCCCTCGGGTGCCTCCAGGAGCTCTACTCCGT
GGCTGGCGTCGTTCCTCTCCCCGCATTACCTTACGGAGCCACACCGGGGA
GCACCTATGTGGTCTTGCGGCGTGAGGCGGATCGCGGTGCGGTCTGAGGA
CCTAAATCTGAGCCAAATGGTTGCTGATTGTATCCGATAGGTCCGGTGTA
TTCGTGGGCAACCGGCCCGTGCTAGTGCGGGCCCAGCTGCAAGCAGACCA
AGCGGCAGGGATGGTGCTGAAGTTCAAAGAGCTCCAAGAGGCCATCGTGG
CCGTGATTGACTACCTAGGAATGCAAGCCTGCGACGGCACCGCCGCCATG
GGGAAGCCGGGCTCCAGCACGCACAATCTCCACCTGTGGCTCCGCTTGGT
GACTTTAAGAAGAATTGGGAGGCCTTAGGGCCCGAGCAGGAGGTGATGGA
GCACTTCCAGCTGCAGATCGAGGGCGAACCCTCTGGGTTTGCGGAAGAGT
ACCCCTTGGAAGCGTTGGAGATCAACACCAGCGACTACATGGCAAAGATA
CGGTGATCTCGCCTGAAAGTTTGCAGTGCCGCCTTCTTTTCAACGTGGTA
GACATCGACCCGGTCTCGGGCGAGCCCCTCGGGTGCCTCCAGGAGCTCTA
CTCCGTGGCTGGCGTCGTTCCTCTCCCCGCATTACCTTACGGAGCCACAC
CGGGGAGCACCTATGTGGTCTTGCGGCGTGAGGCGGATCGCGGTGCGGTC
TGAGGACCTAAATCTGAGCCAAATGGTTGCTGATTGTATCCGATAGGTCC
GGTGTATTCGTGGGCAACCGGCCCGTGCTAGTGCGGGCCCAGCTGCAAGC
AGACCAAGCGGCAGGGATGGTGCTGAAGTTCAAAGAGCTCCAAGAGGCCA
TCGTGGCCGTGATTGACTACCTAGGAATGCAAGCCTGCGACGGCACCGCC
GCCATGGGGAAGCCGGGCTCCAGCACGCACAATCTCCACCTGTGGCTCCG
CTTGGTGACTTTAAGAAGAATTGGGAGGCCTTAGGGCCCGAGCAGGAGGT
GATGGAGCACTTCCAGCTGCAGATCGAGGGCGAACCCTCTGGGTTTGCGG
AAGAGTACCCCTTGGAAGCGTTGGAGATCAACACCAGCGACTACATGGCA
AAGATACGGTGATCTCGCCTGAAAGTTTGCAGTGCCGCCTTCTTTTCAAC
GTGGTAGACATCGACCCGGTCTCGGGCGAGCCCCTCGGGTGCCTCCAGGA
GCTCTACTCCGTGGCTGGCGTCGTTCCTCTCCCCGCATTACCTTACGGAG
CCACACCGGGGAGCACCTATGTGGTCTTGCGGCGTGAGGCGG back to top
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