EWM22327.1, cds8358 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22327.1 vs. NCBI_GenBank
Match: gi|585102824|gb|EWM22327.1| (Protein of unknown function DUF3228 [Nannochloropsis gaditana]) HSP 1 Score: 553.903 bits (1426), Expect = 0.000e+0 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0 Query: 1 MKKLAWPLPIRIRSSRLWNQLPSASLRTLVLSGPRFTCIQRTSRLSSLFAVYDQHVCLRSQFIGFTLGISLICLPIATSIPSKISLQITAFKKNLLPSLTHVDNYLRTKTPPLREGYSSFCYHLIVPNFAHLKASYLKIVPENEHLIRTAYDANSPEDLPVLTRYFPASAVKEMTGPAKFLDVILYTREEIHQENIARGMEHLNNASDAPWGIMRVKAQDVERELPMLPTTLIRNALGKGFGGSGVPLDVDRYKESVGFWMHHAAIR 267 MKKLAWPLPIRIRSSRLWNQLPSASLRTLVLSGPRFTCIQRTSRLSSLFAVYDQHVCLRSQFIGFTLGISLICLPIATSIPSKISLQITAFKKNLLPSLTHVDNYLRTKTPPLREGYSSFCYHLIVPNFAHLKASYLKIVPENEHLIRTAYDANSPEDLPVLTRYFPASAVKEMTGPAKFLDVILYTREEIHQENIARGMEHLNNASDAPWGIMRVKAQDVERELPMLPTTLIRNALGKGFGGSGVPLDVDRYKESVGFWMHHAAIR Sbjct: 1 MKKLAWPLPIRIRSSRLWNQLPSASLRTLVLSGPRFTCIQRTSRLSSLFAVYDQHVCLRSQFIGFTLGISLICLPIATSIPSKISLQITAFKKNLLPSLTHVDNYLRTKTPPLREGYSSFCYHLIVPNFAHLKASYLKIVPENEHLIRTAYDANSPEDLPVLTRYFPASAVKEMTGPAKFLDVILYTREEIHQENIARGMEHLNNASDAPWGIMRVKAQDVERELPMLPTTLIRNALGKGFGGSGVPLDVDRYKESVGFWMHHAAIR 267
BLAST of EWM22327.1 vs. NCBI_GenBank
Match: gi|298707970|emb|CBJ30341.1| (flagellar associated protein [Ectocarpus siliculosus]) HSP 1 Score: 176.022 bits (445), Expect = 8.537e-51 Identity = 83/166 (50.00%), Postives = 116/166 (69.88%), Query Frame = 0 Query: 102 VDNYLRTKTPPLREGYSSFCYHLIVPNFAHLKASYLKIVPENEHLIRTAYDANSPEDLPVLTRYFPASAVKEMTGPAKFLDVILYTREEIHQENIARGMEHLNNASDAPWGIMRVKAQDVERELPMLPTTLIRNALGKGFGGSGVPLDVDRYKESVGFWMHHAAIR 267 V+ R L EGY+ FC H+ VPNFA +K S +KI PENE L+ Y+A + ++LP+L+R+F + V+ T AKFLD+ILY+RE+I +E A G E + S+APWGI+ VK+QDV+ E+PM P T++RNALGK GGSGVPL+ ++Y +SV FW HA ++ Sbjct: 90 VNEIFRAAGGKLEEGYAPFCKHVFVPNFAGVKTSTVKITPENEKLLVAGYEARTAKELPILSRWFESGTVE--TPEAKFLDIILYSREQIRKETAAMGKEKED--SEAPWGIISVKSQDVDHEIPMQPITMMRNALGKEEGGSGVPLEREKYMQSVEFWRDHAPVK 251
BLAST of EWM22327.1 vs. NCBI_GenBank
Match: gi|290996712|ref|XP_002680926.1| (predicted protein [Naegleria gruberi] >gi|284094548|gb|EFC48182.1| predicted protein [Naegleria gruberi]) HSP 1 Score: 167.162 bits (422), Expect = 5.833e-48 Identity = 79/158 (50.00%), Postives = 107/158 (67.72%), Query Frame = 0 Query: 113 LREGYSSFCYHLIVPNFAHLKASYLKIVPENEHLIRTAYDANSPEDLPVLTRYFPASAVKEMTGPAKFLDVILYTREEIHQENIA----RGMEHLNNASDAPWGIMRVKAQDVERELPMLPTTLIRNALGKGFGGSGVPLDVDRYKESVGFWMHHAAI 266 L++GY+ FC HL VPNFA K S+L+I +NEHL+RT Y +LPVL RYFP VK+ +K+LD+ILY++E+I +E+ A E +D WGI+ VK+QDV+ ELPM P T++RNALGK GGSGVPL+ +Y +SV FW ++A I Sbjct: 47 LKDGYAPFCKHLFVPNFAGCKQSFLEITKDNEHLLRTEYQQRKESELPVLCRYFPYDLVKDQIKDSKYLDIILYSKEQILKESEAMQEVSDYEKRPEITDCEWGIISVKSQDVDYELPMTPITMMRNALGKEEGGSGVPLERTKYMDSVEFWKNYATI 204
BLAST of EWM22327.1 vs. NCBI_GenBank
Match: gi|922869556|gb|KOO35654.1| (flagellar associated protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 165.236 bits (417), Expect = 3.081e-47 Identity = 80/156 (51.28%), Postives = 109/156 (69.87%), Query Frame = 0 Query: 112 PLREGYSSFCYHLIVPNFAHLKASYLKIVPENEHLIRTAYDANSPEDLPVLTRYFPASAVKEMTGPAKFLDVILYTREEIHQENIARGMEHLNNASDAPWGIMRVKAQDVERELPMLPTTLIRNALGKGFGGSGVPLDVDRYKESVGFWMHHAAIR 267 PL +GY+ FC HL VPNFA +K + L + PENE +R+ Y+A + ++L VLTR+FP E T A+++D+ILY+RE+I++E A G E + APWGI+ +KAQDV ELPM P T++RNALGK GGSGVP++ +Y ESV FW HA I+ Sbjct: 44 PLVDGYAPFCKHLFVPNFAGVKNNVLVVTPENEGRLRSGYEARTEQELAVLTRWFPKDGADEPT-VARYMDIILYSREQINKEAAAMGREE--EPTTAPWGIISIKAQDVGYELPMQPITMMRNALGKEEGGSGVPMERAKYLESVAFWSKHAPIK 196
BLAST of EWM22327.1 vs. NCBI_GenBank
Match: gi|585110008|gb|EWM27735.1| (Protein of unknown function DUF3228 [Nannochloropsis gaditana]) HSP 1 Score: 163.31 bits (412), Expect = 7.212e-46 Identity = 87/187 (46.52%), Postives = 116/187 (62.03%), Query Frame = 0 Query: 82 SKISLQITAFKKNLLPSLTHVDNYLRTKTPPLREGYSSFCYHLIVPNFAHLKASYLKIVPENEHLIRTAYDANSPEDLPVLTRYFPASAVKEMTGPAKFLDVILYTREEIHQENIARGMEHL-NNASDAPWGIMRVKAQDVERELPMLPTTLIRNALGKGFGGSGVPLDVDRYKESVGFWMHHAAIR 267 SKI L + F++ + N P L +GY+ FC H+ +PNFA L++ I EN HL+R+ Y+A ++LPVL RYFP V PA FLD+ILY+RE+I +EN M +L + +PWGI+ VK QDV+ ELPM P T++RNALG+G+GGSGV LD +Y SV FW HA IR Sbjct: 70 SKIRLPPSEFEEQV--------NAYYQANPTLVDGYAPFCKHIFMPNFAGLRSGTSPITSENVHLLRSVYEARKEKELPVLIRYFPKEEVA--LKPAAFLDIILYSREQIQKEN--EDMANLVKEQNHSPWGIVSVKPQDVDYELPMQPITMLRNALGRGYGGSGVALDQTQYLASVDFWSCHAIIR 244
BLAST of EWM22327.1 vs. NCBI_GenBank
Match: gi|118356530|ref|XP_001011521.1| (flagellar associated protein [Tetrahymena thermophila SB210] >gi|89293288|gb|EAR91276.1| flagellar associated protein [Tetrahymena thermophila SB210]) HSP 1 Score: 160.614 bits (405), Expect = 1.710e-45 Identity = 78/155 (50.32%), Postives = 104/155 (67.10%), Query Frame = 0 Query: 113 LREGYSSFCYHLIVPNFAHLKASYLKIVPENEHLIRTAYDANSPEDLPVLTRYFPASAVKEMTGPAKFLDVILYTREEIHQENIARGMEHLNNASDAPWGIMRVKAQDVERELPMLPTTLIRNALGKGFGGSGVPLDVDRYKESVGFWMHHAAIR 267 L +GY+ FC HL +PNF K S KI PENEHL++T Y+A + ++LPVL RYFP +V + A LD+ILY++E+I EN A G N D WG++ VK Q+++ E+PM P T++RNALGK GGSGVPLD +Y ESV FW +A I+ Sbjct: 46 LVDGYAPFCKHLFIPNFTQTKLSTSKITPENEHLLKTIYEARTEKELPVLRRYFPVGSVPQEV--ASHLDIILYSKEQIQLENAAMGNVDPNKDIDYHWGVVSVKPQNLDYEIPMDPITMMRNALGKEEGGSGVPLDRKKYLESVEFWSKNAIIK 198
BLAST of EWM22327.1 vs. NCBI_GenBank
Match: gi|1173937464|gb|OQR88253.1| (hypothetical protein THRCLA_10388 [Thraustotheca clavata]) HSP 1 Score: 160.614 bits (405), Expect = 1.800e-45 Identity = 78/166 (46.99%), Postives = 110/166 (66.27%), Query Frame = 0 Query: 102 VDNYLRTKTPPLREGYSSFCYHLIVPNFAHLKASYLKIVPENEHLIRTAYDANSPEDLPVLTRYFPASAVKEMTGPAKFLDVILYTREEIHQENIARGMEHLNNASDAPWGIMRVKAQDVERELPMLPTTLIRNALGKGFGGSGVPLDVDRYKESVGFWMHHAAIR 267 +++ + L +GY+ FC HL VPNF K SY +I N+HL+++ Y A P +LPVL R+FP+++++ AKFLDVILY+RE+I +E+ A G D+PWGI+ +KAQD E ELPM P T++RNALGK GGSGVPL + Y ++V +W HA I+ Sbjct: 37 INDLFDSGACSLVDGYAPFCKHLFVPNFVQAKLSYARITDANKHLLQSDYVARVPTELPVLVRWFPSNSIEPEI--AKFLDVILYSREQICKEHEATGAPFDAKNGDSPWGIISIKAQDAEHELPMNPITVMRNALGKEEGGSGVPLLRENYMQAVKYWKDHAVIQ 200
BLAST of EWM22327.1 vs. NCBI_GenBank
Match: gi|219113855|ref|XP_002186511.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209583361|gb|ACI65981.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 160.999 bits (406), Expect = 1.856e-45 Identity = 78/161 (48.45%), Postives = 112/161 (69.57%), Query Frame = 0 Query: 107 RTKTPPLREGYSSFCYHL-IVPNFAHLKASYLKIVPENEHLIRTAYDANSPEDLPVLTRYFPASAVKEMTGPAKFLDVILYTREEIHQENIARGMEHLNNASDAPWGIMRVKAQDVERELPMLPTTLIRNALGKGFGGSGVPLDVDRYKESVGFWMHHAAI 266 R ++ L++GY+ FC H+ +V +F + + + L I ENEHLIRT Y+A + ++LPVL R+FP + V + AK+LD+ILY+RE+I++EN ++G + N + APW I+ +KAQDV ELPM P T +RN+LGK GGSGVPLD Y E+V +W HA I Sbjct: 46 RFQSADLKDGYAPFCKHVFLVNDFTNARVNVLPITEENEHLIRTKYEARNDKELPVLARFFPQNLVGDDLPVAKYLDLILYSREQINKENASQGRDP--NPASAPWNIVSIKAQDVPDELPMNPITAMRNSLGKAEGGSGVPLDRKAYAEAVNYWKDHAVI 204
BLAST of EWM22327.1 vs. NCBI_GenBank
Match: gi|1210521950|dbj|GAX19385.1| (hypothetical protein FisN_4Lh364 [Fistulifera solaris]) HSP 1 Score: 161.384 bits (407), Expect = 2.920e-45 Identity = 78/159 (49.06%), Postives = 107/159 (67.30%), Query Frame = 0 Query: 107 RTKTPPLREGYSSFCYHLIVPN-FAHLKASYLKIVPENEHLIRTAYDANSPEDLPVLTRYFPASAVKEMTGPAKFLDVILYTREEIHQENIARGMEHLNNASDAPWGIMRVKAQDVERELPMLPTTLIRNALGKGFGGSGVPLDVDRYKESVGFWMHHA 264 R + L++GY+ FC H+ V N F + L I PENE +R+ Y+A + ++LPVLTR+FPA V + AKFLD+ILY+RE+I++EN A+G N APWGI+ +KAQD + ELPM P T +RNALGK GGSG+P+D +Y E+V +W HA Sbjct: 80 RYRGSNLKDGYAPFCKHIFVENDFTDAVVNVLPITPENESKLRSKYEARNDKELPVLTRWFPAELVGKDLPKAKFLDLILYSREQINKENAAQG--RAENVVTAPWGIVSIKAQDADHELPMTPITAMRNALGKEEGGSGIPIDRQQYMEAVNYWKDHA 236
BLAST of EWM22327.1 vs. NCBI_GenBank
Match: gi|1210512588|dbj|GAX28445.1| (hypothetical protein FisN_4Hh364 [Fistulifera solaris]) HSP 1 Score: 160.999 bits (406), Expect = 4.494e-45 Identity = 77/155 (49.68%), Postives = 107/155 (69.03%), Query Frame = 0 Query: 113 LREGYSSFCYHLIVPN-FAHLKASYLKIVPENEHLIRTAYDANSPEDLPVLTRYFPASAVKEMTGPAKFLDVILYTREEIHQENIARGMEHLNNASDAPWGIMRVKAQDVERELPMLPTTLIRNALGKGFGGSGVPLDVDRYKESVGFWMHHAAI 266 L+ GY+ FC HL V N F + L I+PENE +R+ Y+A + ++LPVLTR+FPA V + AK+LD+ILY+RE+I++EN A+G N APWGI+ +KAQD + ELPM P T +RNALGK GGSG+P+D +Y E+V +W +HA + Sbjct: 86 LKGGYAPFCKHLFVENDFTDAVVNVLPIIPENESKLRSKYEARNDKELPVLTRWFPAELVGKDLPKAKYLDLILYSREQINKENAAQG--RAENPVTAPWGIVSIKAQDADHELPMTPITAMRNALGKEEGGSGIPIDRQQYMEAVNYWKNHATV 238 The following BLAST results are available for this feature:
BLAST of EWM22327.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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