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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100118g17.2759.mrna |
| Orig protein id | gnl|cribi|Naga_100118g17.2759 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:532486..532957 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8380 ID=rna8380|Name=rna8380|organism=Nannochloropsis gaditana|type=mRNA|length=2322bp
GTGTGATGTGAAAATTCGCGTGCTACAGTACCTCATCAGGTTGGTCGCTG
TCCCAGCCTGGTCAGGTCCGTGGGAAGAAATCGACAGGGTGCTCACCGCA
CATCCCTTTACCATAAGGGAATAACCGCATTATTGAACCCTGCTTGTCTT
GTTACATTTCTTGTTCACCTCGTTGCCTCTTTTTGGCCACACATCGCAGG
CAAAAAACCTCGCAAGACTACGGACACCCTTCCTCTCCTCAGGGCGCCAC
CAAGGGCAAAAACAAGCCTCCTCATGGAAGCGTTTTGTCCCCGTTCAGTC
ATGTTTTGACCGCGCACGTAGCAAGTGGAGGAACGTCTGGGGAGGGCCAT
TCCTCTCGAGAAGGAGTGTCGCCCGTCCATTCTGCCGAGCACGTACTGTC
ACAAGCTAGACCATGATACAGGAACCTGATGCCACGCCCAGCAATGACAA
CTCTGCTGACCTTTTGCTTCGCTTCCTCCCCGCTGGCAAAGCCTCGGCGG
AGAGCGACCTCCCTCACCTGCCCTACGCCCCAAGCGGTGCTTCCCCGCCC
CGTTTCCATCCTTCCTCCCACTCGTTCCCGACGACGAAACCCCGCAAAAC
ATTGCATTGGGCCATGGCCGGCCTCATCCTCTTCTCTTTCACTGCCCCGG
GCGCCCTGGTCAGCGTGCCTTTCGCCGTCGGGACCACGGGCTACGTCTTG
AGCCTCCTCATCTTGAGCCTTTTCACCGCCGCCACCATCGCGGGCTGTCT
GATGCTCTTGGAGATATACCAATGCAACCCCTACTGCCAAAATCTGCCGG
AGTTGGGCGCCGTGGCCATGGGAAGCGTGCGGGGCCGACGGCTCGCGGCG
ACGGTGCAACTCAGCAACTTCGTCGGCTTCCTGCCCGTCTCGCTCACCAT
CAACGCCCTGGCCTTGCAAGGGACTCTGGGCGTGGCGCCTGAGCATTCCT
GCCTGGATTACTATATCCTCGGCATCAGCGTGCTCTGCCTCTTGAGCACT
CAGGCCCGGGCGCTCTCCAACACGCAAGCCCTCTCCCTCCTCTCCCTCAC
CGCCATCCTGGCCGCGGGGGCCATCCAGCTCGGCGTCGCCTTCTCCCCCT
CCCTTATGCCACCCCTACCGTCCTCCCCGTCCTCCTCCGCCCGCATGTTC
GGCCATCCTCTCCTCCCCCACGCCTCCCCCGCCACGGAGGTCGTGCGCAC
CCTCCTGGGCGTCACCTGCATGGCTTGGTCCTTCGTGCCCTGCTTCCTGG
TCGTCGAACTCGCCTCCGCCATGCCCGCGCCCCACCACTTCCCTCGCGCC
CTTTTTCTGGCGGCGGGCCTTCTCTTCCTTCTCTTCTTGGGCGTGGGCTT
TCCGTTGGTGCATCGGTGGGGGTGGGACCTTCCCGACCCCTCCTACGCCC
TCCCGGCGTGGCCGGCCGCCGCCTCCGTTTCACGCGTCATGCATGCCCTT
GTCCTCCTCGCCAACCTGGTCTCTTACACCCTCGACTCCGTGCCTCTCGT
CCGCTACTGCCAACGGGTCTGGCGCCCGCGCTTCAACCTCCAAGATTGGT
CCCCCCGGGCGCTTGGCCTCTACCTCCTCCTCAGCCTGCCCTCCTTCCTC
TTCGGTGTCCTGGCTGCCCTGGTCGTCGGGAACCTCCTGGCCCTTCTCGC
CTTTGTCAGCGCCTTGTCCGTGCCATGGGTGACGCAGATTCTTCCCGCGC
TTTTTTACCACTCGTGGCGCCGGCGGCTTTCCTCCGCCTCCTCCCGCTCC
TACGCCCACCCTGCGTCGGCCTATGACCGCCCCGACGACTGGATTCTCGC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTCCTCGACCTCGC
CGTTGGGCCGCCTTTCCCTCCTGCTCCCTCCCCCTGTCGCGGGCGGCATC
CACGCCCCTCTCTCCGTGAAGGAAAAATTTCTGCTCGTCTTTGTCGCTTC
GGTGGGGGTCATGAATTTCCTAATTTGTGCGGCGGCGGCGGTGGGGAAAG
TGAGCATCGCGGAGTTGCGGGGGAAGACCCAGATCGGGTGTGGCGCGTGG
ACCCTTTACAGTGATTGATTTGGAGGAGGCGGGGAAGGATGCGGGGGGAG
GTAGAGGATGGGGAAGGAAAGAAGTGTTGGAAGGGACAAGAGAAAGCGAA
GGCATGTAGCCAGAAGGGATGGAAAAGGATGGATGCCGGCTGTTGCTGTC
TCAAAATAGCACGGGACTGAAGTAAACTGTGGAAAGCGTATCGTCACAGC
GAGGGTTCCATCGTAGGAAGCCACAAAACAGGCAAAGGCTCTTCAAATAT
CCATACACACGCCTTTGCATCC back to topprotein sequence of rna8380 >rna8380-protein ID=rna8380-protein|Name=rna8380|organism=Nannochloropsis gaditana|type=polypeptide|length=140bp
MLGATGAAKIGWARRDCTAIEDTEATPVTVHSNSATQLSGFTSINVAIFP
PDSQLHSERAHRQRSCQQPSIPTVRTSHGGPRGQSESHRRGTFGEAGQRG
GEARGVDRTLHGGPAKRGRKGHQEVFQEMIRQGGEHHEKE back to topmRNA from alignment at KK037248.1:532486..532957+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8380 ID=rna8380|Name=rna8380|organism=Nannochloropsis gaditana|type=mRNA|length=472bp|location=Sequence derived from alignment at KK037248.1:532486..532957+ (Nannochloropsis gaditana)
ATGCTAGGCGCTACGGGAGCCGCAAAGATAGGCTGGGCACGCAGAGATTG
CACCGCGATCGAGGACACCGAGGCCACGCCAGTGACCGTACATTCCAATT
CAGGTGCTTCGCTACGTCTTGCACTGTCATCACTGCCATTTTTACTGAAA
AGCAACACAGTTGAGCGGGTTCACGTCTATCAATGtcgcaatttttcctc
cggATAGCCAACTACATAGCGAACGAGCTCATCGTCAAAGGTCTTGCCAA
CAACCGAGCATTCCAACGGTTCGCACTTCGCACGGCGGACCACGTGGACA
AAGTGAAAGCCACAGGCGTGGAACATTCGGGGAAGCTGGCcaaagaggcg
gagaagcaCGTGGGGTTGATAGGACGCTTCATGGGGGCCCTGCAAAAAGA
GGTCGAAAAGGACATCAGGAAGTTTTCCAGGAAATGATAAGGCAGGGGGG
TGAACATCACGAGAAAGAATAA back to topCoding sequence (CDS) from alignment at KK037248.1:532486..532957+ >rna8380 ID=rna8380|Name=rna8380|organism=Nannochloropsis gaditana|type=CDS|length=846bp|location=Sequence derived from alignment at KK037248.1:532486..532957+ (Nannochloropsis gaditana)
ATGCTAGGCGCTACGGGAGCCGCAAAGATAGGCTGGGCACGCAGAGATTG
CACCGCGATCGAGGACACCGAGGCCACGCCAGTGACCGTACATTCCAATT
CAGCAACACAGTTGAGCGGGTTCACGTCTATCAATGtcgcaatttttcct
ccggATAGCCAACTACATAGCGAACGAGCTCATCGTCAAAGGTCTTGCCA
ACAACCGAGCATTCCAACGGTTCGCACTTCGCACGGCGGACCACGTGGAC
AAAGTGAAAGCCACAGGCGTGGAACATTCGGGGAAGCTGGCcaaagaggc
ggagaagcaCGTGGGGTTGATAGGACGCTTCATGGGGGCCCTGCAAAAAG
AGGTCGAAAAGGACATCAGGAAGTTTTCCAGGAAATGATAAGGCAGGGGG
GTGAACATCACGAGAAAGAATAAATGCTAGGCGCTACGGGAGCCGCAAAG
ATAGGCTGGGCACGCAGAGATTGCACCGCGATCGAGGACACCGAGGCCAC
GCCAGTGACCGTACATTCCAATTCAGCAACACAGTTGAGCGGGTTCACGT
CTATCAATGtcgcaatttttcctccggATAGCCAACTACATAGCGAACGA
GCTCATCGTCAAAGGTCTTGCCAACAACCGAGCATTCCAACGGTTCGCAC
TTCGCACGGCGGACCACGTGGACAAAGTGAAAGCCACAGGCGTGGAACAT
TCGGGGAAGCTGGCcaaagaggcggagaagcaCGTGGGGTTGATAGGACG
CTTCATGGGGGCCCTGCAAAAAGAGGTCGAAAAGGACATCAGGAAGTTTT
CCAGGAAATGATAAGGCAGGGGGGTGAACATCACGAGAAAGAATAA back to top
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