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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100208g2.7568.mrna |
| Orig protein id | gnl|cribi|Naga_100208g2.7568 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:452058..454298 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8352 ID=rna8352|Name=rna8352|organism=Nannochloropsis gaditana|type=mRNA|length=5150bp
TGTGCACTTTCAAAGGTAGCCGTACACGGCGTGTGAATGGTTGGGATGTG
GCTTCCTCTTTCTAGTGACACATCCTTCACGTGCTGCTCAAATCCACCCT
TTTAATTTTACCGCATCACACTCCGTTCATCGCAACCTACAGATCGGTTG
CGTTGACGGACCGCGAGAGGGTAGTTTGCAAGTACGGCACTATTTTCACA
ATGCCTGCGGCTGGCAGTGTCATGAACGGCACGCCCATGGTCTCCGCCGT
CGGCAATGGGACGCATGTGCGGTCTAGCCTGGAAACGAACGGGTCAACTC
CCGGGCCACAGGGCAAGGAGTCCCCGTCGACCAGGAGTGGCGAGACGGTG
GACAACGTGGCCTGGAAAACCGACCTTCTGTTGTACGTGAACGGCCTCCG
GACTGTCCTTCACCAGGTCGCGCCAGAGACCACCCTGCTCCAGTACCTCC
GTCTCTGCGGCCTGACGGGGACCAAGCTGGGCTGCGGGGAGGGTGGGTGC
GGGGCATGCACGGTCATGGTCTCTTCCTGGGATACGGCGCAGCAGAGGCC
TCGGCATGTGTCGGTGAACGCCTGCCTGGCCCCCTTGGCGGCCATGGACC
ACTGTGCCGTCACCACCGTGGAAGGGATTGGCTCCATCCGTGCAGGGGTC
CATCCCTTGCAGCGCCGCGTCGCCGAGCTGCACGGCTCCCAGTGCGGGTT
CTGCACGCCGGGCATCATAATGGCCATGTATACCCTGTTCCGCAACAACC
CCGAGGCCTCCGCGGATTTCTTGGAGGAGAACATGGACGGGAACCTCTGC
CGATGCACGGGGTACCGGCCTCTGCTGGACGCGGCCAAGACTTTGCTCGG
GCCCGGGGCTCGAGGGGCAGGCTGCTGCCGGGGAGGGAAAGGGTCGTGCC
CCTGCCAGGAGGCCAGCGACAAGCCCGTCCCCACGGAGGGCGCTGCCGAT
ATTCACGTCCACGCCACCACGGAGGGCCGTGTGAAGGACCTGGCGCGGTA
CCCGCCCTTGGAACGGGACCCGTCCACCGAGCCGATCTTCCCACCGGAGC
TGGCCCTTGCCCACCCCCAGCCCCTGCGGTTCGTATCCAAGCACATGACT
TGGTACCGTCCGACCACCCTGGCCGCCCTGCTTTCACTCAAGGCGGCGCA
TCCGGAGGCCCGCGTGGTGGCTGGGAACACGGAGGTGGGGATCGAGACCA
AGTTCAAGCAGGTGCCCGTGCCCGTGGTGCTGGCGCCCGTGGCCGTGCCT
GAACTCAACGTCCTCCGGGTCACCGAGGCGGGCGTGGACATAGGCGGCGC
CGTCTCCCTGGCCCGTCTGGAGCACTTTGCCGGGCAGGACCACGCAGGCT
TGAAGCAACGGGAGAAGGAGGCGTTCAAAGCCCGGGGTCTCGAAGCCGTG
CATGCCCAACTGCGTTGGTTCGCGTCGAATCAAATCCGAAACGTGGCCTC
CTTGGCGGGGAATCTGGCCACGGCGTCGCCCATCTCGGACATGAACCCGG
TCCTGGTCTCCTTGGGCGCGACCGTGACGCTGGCTTCGCAGGCAAGAGGA
GAGCGGGTCGTGCCTGTCCGCAGCTTTTTCCGGGGCTACCGAAAGGTGGA
CATGCTCGAGGACGAGGTCATCAAAACCATCACCCTCCCGTTCCCGGCCT
CCCGCTTTGAATTCGTGGGCCCCTACAAGCAAGCACGGCGGAGGGAGGAC
GACATAAGCATCGTGACCGCGTGTTTGCGGGTGCGGCTGGTCCCTGTCGC
CTCCCGATCTGCCGAGGGGAGATGGGTGATCGAGGAGGCGGGCTTTGGGT
TTGGCGGGATGGCTCCCACTACCGTGGCCGCCCAGAAAACCGAGGCCTTC
CTACGCGGGAAAGACTGGGCTGTGAGCACCATTCGGGCCGCGTCTCAGGT
GCTGAGGGAAGACCTTCCCCTCCCGGCCACCGTCCCGGGCGGACAGGCTG
AATACCGCCGTACCCTGCCACCCTCCTTCCTTTTCAAATTCTTCGTCAAG
ACCACGCTGGAGTTGGAATCCCTGGTCGCTGCGGCCCCCCCTTCGTCGCC
TTTGCCCCCTGTGCCCGTCATCCCTGCCGCCGAGCGCTCCGCCGCCCGTT
CCTTTTTGACCGAACCCAAGCCTGCCACCCGGGGCGAGCAGCGTTTCACC
TCGGTGCGTGTCGGCGAGGGCCTTCAAGACTACCCTCCCGGCGCGCCGCA
CACCCCTGCCCCCGCCGAAGAAATTGCCAAAGGGCGAGGGGCCGTCGGGA
AGCCGGTCATGCACAAGTCCGCCCTCGCCCAAGTGACGGGGGAAGCTAAG
TATACCGACGACCTGCCCATGCCACCGCCCCCCGGTCTCTTGCATGGGGC
CCTGGTCATGAGCACGAAAGCTTACGCGCGCCTGGTCTCGGTAGACGCCA
CGGCCGCCTTGGCGGTGGAAGGCGTGGTGCGCTTCATCTCCTACAAGGAC
GTGCCGGGGGGTAACAAGATCGGCGCGGTGGTCAAAGACGAGGAGTGTTT
TGCCACCCAGGAAGTGCACCATGTCGGGGCCGTGATTGGAATCGTAGTGG
CGGAGACGGAAGCGGCCGCAGGGGAGGGGGCTCGGGCAGTCAAGGTGGAA
TATGAGGAGCTATCCCCCGTGATCACAAACATTGAGGAGGGAATCCGGCA
CAATTCTTTCTTCGCCTTCGACCACATGCTTGAGAGCGGTCCAAACGTGG
AGGCAGTGTTGGCGGCGGCGGCGGGAAACAAAGAAGGGGCGGTGGTGGTG
GAAGGAGAAATGAGAGTAGGGGGCCAGGAACATTTCTACCTAGAGACCAA
TGCCACGTACGCGATTCCCGGGGAAGACGGGGCCTTGGAGGTGTGGGCGT
CGACTCAGAACCCGAGCAAGACACAAAATTTCTGTGCCTACGTATGCGGG
ATCCCCACCAACCGGGTCGTGTGTCGGATGAAAAGGATGGGGGGTGGATT
TGGGGGCAAGGAGACTCGCTCCGTCTTCATCTCCTGCACGGCGGCCTTGG
CTGCACATCTGACCCAGCGTCCGGTACGGATATCCTTGGATCGGGACGTG
GATATGCACATCACGGGTCAACGCCATGCGTTCTTGGCACGGTACAAGGC
GGCCGCGGGCATGGACGGGAAGCTCCTGGCCTTGAACGTGGAACTCTTCA
ACAACGGCGGGTTCTCCCTCGACCTCTCGGGCCCCGTGGCGGACCGCGCG
CTCTTTCACGTGGATAATTGCTACCGGTGGCCGTCTCTGCGAGCGCGGGG
ACGCATTGTTCGCACCCACCAGGCTTCGCACACCGCCTTTCGTGGCTTTG
GAGGACCGCAAGGGATGGTCATCACGGAGGCGATCATGGATCACCTGGCG
TCGGCGTTGGGCACCGACCCACAGTTTTTCCGAGAAAAGAATTTTTATCA
AGAGAAGGAGAGGACGCATTTCGGACAGGAATTAGTGCGGTGGCACGTCC
CCCGGGCTTGGGAAGAGGCCTTGAGGGAGGGGCAGGTGGCCGCACGGCGG
GGTGAAATTGAGGCCTTCAATGCCGCCCATCGGTACCGGAAACGAGGACT
CTGCGCCATCCCGACCAAATTTGGGATTTCATTTACCGCCAAATTTATGA
ACCAGGGAGGCGCCCTTGTGCACGTCTATCAGGACGGCACGGTCCTGGTA
TCGCACGGCGGCACCGAAATGGGCCAAGGCCTGCACACCAAAGTCTGTCA
GATCGCTGCCCGGGCCTTTGGGCTTGAGGAAGAGCAGGTCCACATTGCTG
AGACCGCGACGGATCGGGTCGCAAATTCTCAGCCCACGGCGGCTTCCATG
AGCACGGATTTGTACGGCATGGCTACGTTGGACGCTTGTCAACAGATTCT
CAGGCGGCTCGCCCCCGTCCGGGCACGGCTCGGTGGGGAGAAGGCGGAGT
GGACGGCGGTAGTGCAAGCGGCATACTTTGAACGCATCGACCTGTCGGCG
CACGGGTTTTACATCGTGCCGGACGACATGTGCGGGTATGACTGGGAGAA
AAAGGGTGTAACCAACAACAGCGAAAGGGGCCAGCCCTTCAATTACTTCA
CGCAAGGCACGGCGGTGTCAGAGGTGGAAGTGGATTGTCTGACGGGCGAC
GCCCGGGTGCTGCGGGCCGACATAGTAATGGACGTGGGTGCGTCGATCAA
CCCCTCCATCGACGTGGGCCAGATCGAGGGTGCCTTCGTCCAGGGCTTTG
GGTGGCTGACAACGGAGGAGCTTATCTGGGGCGACGCAGACCATCCCTGG
GTAAAACCGGGGTCCCTTCTGACGCGTGGACCGGGCGCTTACAAAATCCC
GGCCTTCAACGACGTGCCCATTGATTTTCGGGTGACGCTCTTGAAAGATA
CCAAGAACCCCGTGGCCGTCCATTCCAGCAAAGCGATCGGAGAACCGCCC
TTCTTCTTGGCGGCTTCGGCGTTTTTCGCGATCAAAGATGCGGTCTCAGC
CTACCGAACACAGGAGCTAGGTATTGATGGGTTTTTCCCCTTTTACGGGC
CGGCGTCCACGGAGCGGATTCGCATGGCATGCGTGGATGACTTGGCAGCG
GCGAGCATGGAGGAGGGTATTGAGGCGGCAGGCTTTCAGGCAAAGGGAAG
CTGGTAGGGAGAAAGTGCTTGCTATCGTACGATTGTATCTGCAGGTGCTA
GGACGTGTGCACTGGACTACAGGTGTCAAAAAGTGTTCCGGATCTTCTTA
TGGCGTTGAAAAGGGCGGAAGTTGTACGACGGTAGCTTTACACAATATAA
ATTGCTGCGAGGTATGGTGAGGGTAAATGAAACAGAAAACACGTCAAGCA
GACAAATAGGGTGTTGCAGGACAGGCGCGCATAGAAAAAATTAGGCAGGA
TTTCTGTTGACAGGAGGAGGCGTTGTCGGAGCCCCGTCTTGGATGTGGGG
TTGATACTGCGTGATGCTCACAAACTTTAAGGCAATGAGTAGGTGCCAGG
AGTTGGAGAGCACGGATGTGAAAAGCCGTGTAGGATAATGGAGAGACTGC
GTGAGTTGTGCTTTCCGCCTCGTGACCAAGCCGCCCGAGGGTGCCAAATT
ACATAGATTAGAGACGTGGGGTTGGAGGCTAGAGCTAGTCCCCCGCACGA
TCATCAAGGCAAACTCATGAATGAAGACATATGATGAGCGAAATGGGTGA back to topprotein sequence of rna8352 >rna8352-protein ID=rna8352-protein|Name=rna8352|organism=Nannochloropsis gaditana|type=polypeptide|length=676bp
MLVLTFLFAIFKPRMRYENSKQASHTHHTRHYLSTCARMPCSGELLRPQD
TRARRKRRALCFLPGVLASILLVFSVTTTPAAGLILPPIDAATGPEVALV
LLHGANVSPEAYLPLCRTLQTVIQTDVRLWIGLPDVNLNVPIYLDGAMND
LKSNFTARGLPVDAPRFLAGHSLGGVRAQSYAQEHAEDWVGGILMASVLL
REYDNMTYPVPTLTVGGEKDGNMRVSRVAQASHVYRMQAEKTEDFPVVVV
PGANHMSFASGQPPLPVALADLTAEISEDDGHESIAQVMAAFMRARLRQE
LRRAGDREDRGSSGDVRFQEDSVMTAALETTAQLVDPLIKAMLLEGSWHF
QPPCNSDRPSPHCPFYPAWPPQPEDREPSTETNCVCGCLWVMDVAQAHVG
DLEGYATYVVRDAFHDVRDTEPYHHAHLWNGCTTGALLDGSCVLNITTVS
ELIFDPLDALDAGFAPVTAAEIRAKMKSRQSIYQETVDPEAALADTDKFD
FCAEINAKAFAWAHAQAPPRTKERFDRLGVQPVFDPDIRRRVQIGPIWIN
SPLRLHEQYDRLKEQYFWHIQSPTLVTDVTANIYPDSAGYHYCKLLSPAR
ALEWIYVDGLRRYDRASGVVGRGEEGTGGMTAEEETGDQLARGKPVNSER
AGKGGRGWDQNNQEGPYQTASLRERL back to topmRNA from alignment at KK037248.1:452058..454298- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna8352 ID=rna8352|Name=rna8352|organism=Nannochloropsis gaditana|type=mRNA|length=2241bp|location=Sequence derived from alignment at KK037248.1:452058..454298- (Nannochloropsis gaditana)
TATCGAGTCGCAGCAAACTTCAAGTCGCTCCGACGATGGTACTCGTTGCC
TATGTCATGTCCCCTGTCTCCGGCAACACTTTTCGAACGTGTCATTTGTC
TAGGTGTACGGTAATATAACGGTCCGATCTCATCTCTGGGAGCGCAGGCA
TGCTCGTGCTTACCTTTTTATTCGCCATATTCAAACCCCGGATGCGATAT
GAGAATTCAAAGCAAGCCAGTCACACTCACCATACCAGGCATTATTTATC
TACCTGCGCCAGGATGCCATGCAGCGGGGAACTCTTGCGCCCTCAAGATA
CGCGTGCTAGGAGGAAAAGAAGGGCTTTATGCTTTCTACCAGGTGTTCTG
GCGTCCATCTTACTTGTCTTCAGCGTGACAACTACTCCCGCTGCCGGACT
TATCCTCCCCCCCATCGACGCAGCAACAGGGCCTGAGGTTGCCCTAGTCC
TCCTTCACGGGGCTAACGTCTCTCCCGAGGCATATCTGCCTTTATGTCGC
ACGCTCCAAACAGTAATTCAGACTGACGTACGTCTGTGGATAGGTTTGCC
GGATGTTAATCTGAATGTTCCTATCTATCTTGACGGCGCTATGAATGATC
TCAAATCTAATTTTACGGCTCGCGGGCTACCGGTCGATGCCCCACGCTTC
CTTGCCGGACACTCGCTCGGTGGTGTCCGTGCGCAATCTTACGCTCAAGA
GCATGCAGAAGATTGGGTGGGAGGGATCTTGATGGCTTCTGTGCTCCTGC
GCGAGTACGACAACATGACTTACCCCGTCCCAACCCTGACCGTGGGGGGA
GAAAAAGACGGGAACATGCGTGTGTCCCGCGTCGCTCAAGCCTCGCATGT
CTACCGCATGCAGGCGGAGAAGACGGAGGATTTCCCCGTGGTCGTGGTCC
CGGGGGCGAATCACATGAGTTTCGCGTCAGGCCAACCGCCTCTTCCTGTG
GCTTTGGCGGATCTGACCGCCGAAATTTCCGAGGATGACGGCCACGAAAG
CATTGCCCAGGTGATGGCGGCTTTCATGCGCGCGCGTCTGCGCCAGGAGC
TGCGGAGAGCAGGAGATCGTGAGGATCGTGGAAGCAGCGGAGACGTTCGA
TTTCAGGAGGACAGTGTGATGACCGCGGCACTGGAGACAACGGCGCAGCT
GGTCGACCCCTTGATCAAAGCCATGCTCTTGGAAGGCTCCTGGCACTTTC
AGCCGCCCTGCAATTCCGACAGGCCCAGCCCGCACTGCCCCTTCTACCCG
GCCTGGCCCCCACAGCCTGAGGACCGGGAACCGAGCACGGAGACGAACTG
CGTGTGTGGATGCTTGTGGGTCATGGACGTGGCTCAGGCGCACGTCGGAG
ATTTGGAGGGGTACGCCACTTACGTGGTCCGGGACGCTTTCCACGACGTG
CGAGACACAGAGCCCTACCATCATGCCCACCTGTGGAACGGCTGCACAAC
GGGGGCCCTCCTGGACGGGAGCTGCGTGCTCAACATCACCACTGTGAGTG
AGCTGATCTTTGACCCACTCGACGCCCTGGATGCTGGCTTTGCCCCCGTC
ACCGCTGCGGAAATTCGGGCCAAGATGAAAAGCCGGCAGTCCATCTACCA
GGAGACGGTGGATCCGGAAGCAGCCTTGGCGGACACGGATAAATTCGATT
TCTGCGCGGAAATAAATGCCAAAGCATTCGCCTGGGCCCACGCCCAGGCT
CCGCCCCGAACGAAAGAGAGGTTTGATAGACTGGGAGTACAGCCCGTGTT
CGACCCCGACATTCGACGCCGCGTGCAGATCGGTCCCATCTGGATCAACA
GCCCCCTGCGCTTGCACGAGCAGTACGATCGGCTCAAGGAGCAGTACTTC
TGGCATATACAGAGCCCTACGCTCGTGACGGACGTCACCGCAAACATTTA
TCCCGACAGTGCTGGCTATCACTACTGCAAACTGCTCTCCCCCGCGCGGG
CACTGGAATGGATCTACGTGGACGGTTTGCGCAGGTACGACAGGGCAAGC
GGAGTAGTGGGAAGGGGGGAAGAAGGGACGGGAGGGATGACGGCGGAAGA
AGAGACAGGGGATCAATTGGCTAGAGGAAAGCCTGTTAACAGCGAGCGTG
CAGGAAAAGGGGGGCGCGGATGGGACCAGAACAACCAAGAGGGACCGTAT
CAAACCGCCTCCCTCCGTGAGAGGCTGTAAAGTGCAGTGTATGATTCATG
TGTGCGTTTTCATGAAAAAAAGAATTATCGAGCGCGACAAA back to topCoding sequence (CDS) from alignment at KK037248.1:452058..454298- >rna8352 ID=rna8352|Name=rna8352|organism=Nannochloropsis gaditana|type=CDS|length=2031bp|location=Sequence derived from alignment at KK037248.1:452058..454298- (Nannochloropsis gaditana)
ATGCTCGTGCTTACCTTTTTATTCGCCATATTCAAACCCCGGATGCGATA
TGAGAATTCAAAGCAAGCCAGTCACACTCACCATACCAGGCATTATTTAT
CTACCTGCGCCAGGATGCCATGCAGCGGGGAACTCTTGCGCCCTCAAGAT
ACGCGTGCTAGGAGGAAAAGAAGGGCTTTATGCTTTCTACCAGGTGTTCT
GGCGTCCATCTTACTTGTCTTCAGCGTGACAACTACTCCCGCTGCCGGAC
TTATCCTCCCCCCCATCGACGCAGCAACAGGGCCTGAGGTTGCCCTAGTC
CTCCTTCACGGGGCTAACGTCTCTCCCGAGGCATATCTGCCTTTATGTCG
CACGCTCCAAACAGTAATTCAGACTGACGTACGTCTGTGGATAGGTTTGC
CGGATGTTAATCTGAATGTTCCTATCTATCTTGACGGCGCTATGAATGAT
CTCAAATCTAATTTTACGGCTCGCGGGCTACCGGTCGATGCCCCACGCTT
CCTTGCCGGACACTCGCTCGGTGGTGTCCGTGCGCAATCTTACGCTCAAG
AGCATGCAGAAGATTGGGTGGGAGGGATCTTGATGGCTTCTGTGCTCCTG
CGCGAGTACGACAACATGACTTACCCCGTCCCAACCCTGACCGTGGGGGG
AGAAAAAGACGGGAACATGCGTGTGTCCCGCGTCGCTCAAGCCTCGCATG
TCTACCGCATGCAGGCGGAGAAGACGGAGGATTTCCCCGTGGTCGTGGTC
CCGGGGGCGAATCACATGAGTTTCGCGTCAGGCCAACCGCCTCTTCCTGT
GGCTTTGGCGGATCTGACCGCCGAAATTTCCGAGGATGACGGCCACGAAA
GCATTGCCCAGGTGATGGCGGCTTTCATGCGCGCGCGTCTGCGCCAGGAG
CTGCGGAGAGCAGGAGATCGTGAGGATCGTGGAAGCAGCGGAGACGTTCG
ATTTCAGGAGGACAGTGTGATGACCGCGGCACTGGAGACAACGGCGCAGC
TGGTCGACCCCTTGATCAAAGCCATGCTCTTGGAAGGCTCCTGGCACTTT
CAGCCGCCCTGCAATTCCGACAGGCCCAGCCCGCACTGCCCCTTCTACCC
GGCCTGGCCCCCACAGCCTGAGGACCGGGAACCGAGCACGGAGACGAACT
GCGTGTGTGGATGCTTGTGGGTCATGGACGTGGCTCAGGCGCACGTCGGA
GATTTGGAGGGGTACGCCACTTACGTGGTCCGGGACGCTTTCCACGACGT
GCGAGACACAGAGCCCTACCATCATGCCCACCTGTGGAACGGCTGCACAA
CGGGGGCCCTCCTGGACGGGAGCTGCGTGCTCAACATCACCACTGTGAGT
GAGCTGATCTTTGACCCACTCGACGCCCTGGATGCTGGCTTTGCCCCCGT
CACCGCTGCGGAAATTCGGGCCAAGATGAAAAGCCGGCAGTCCATCTACC
AGGAGACGGTGGATCCGGAAGCAGCCTTGGCGGACACGGATAAATTCGAT
TTCTGCGCGGAAATAAATGCCAAAGCATTCGCCTGGGCCCACGCCCAGGC
TCCGCCCCGAACGAAAGAGAGGTTTGATAGACTGGGAGTACAGCCCGTGT
TCGACCCCGACATTCGACGCCGCGTGCAGATCGGTCCCATCTGGATCAAC
AGCCCCCTGCGCTTGCACGAGCAGTACGATCGGCTCAAGGAGCAGTACTT
CTGGCATATACAGAGCCCTACGCTCGTGACGGACGTCACCGCAAACATTT
ATCCCGACAGTGCTGGCTATCACTACTGCAAACTGCTCTCCCCCGCGCGG
GCACTGGAATGGATCTACGTGGACGGTTTGCGCAGGTACGACAGGGCAAG
CGGAGTAGTGGGAAGGGGGGAAGAAGGGACGGGAGGGATGACGGCGGAAG
AAGAGACAGGGGATCAATTGGCTAGAGGAAAGCCTGTTAACAGCGAGCGT
GCAGGAAAAGGGGGGCGCGGATGGGACCAGAACAACCAAGAGGGACCGTA
TCAAACCGCCTCCCTCCGTGAGAGGCTGTAA back to top
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