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Properties
| Property Name | Value |
|---|
| Product | Acetohydroxy acid isomeroreductase, catalytic |
| Orig transcript id | gnl|cribi|Naga_100208g4.7569.mrna |
| Orig protein id | gnl|cribi|Naga_100208g4.7569 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:443499..445655 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8350 ID=rna8350|Name=rna8350|organism=Nannochloropsis gaditana|type=mRNA|length=1851bp
ATGGGATTTGATATGAGGAAAGTAAAGGACATGAAGAGATGGGGGGGAGG
TTGGGAATTGAAAAAGGAAATTAATTGCATGGATGGATCTTTTGAAAAAT
CGACTACCACAAAGGGTGAAAAATCTAAACTAATTATTGCTCCCTCACCA
TGTTTCGGCGTAATTCCAGACGTATTATTAATGGATTCAATTCCGTTTCT
GTCCACCAAAAAGAGTAATTCCGGGGCAATACCCGTATATGTGCCCTATT
CCAAATTACAAGACTGGCTTATAGACAGGAAACAGCTCCCACGCGACTGG
ACCGAGAAGCTTAAGAACGTCAAATCTTTGCTCCAAGAAGGTCTTAGGGA
GCTCGAGACAGGCGGTGGAGAGGTGGCTGACTGGGTCAAGGGGAAGGAAA
GCAGTGCCTTGCATTTTTATACGTGCACGCAGATCATGTCTTTGCTGGAA
GGAGCTCAGCAAGGCCGCACAAAGAATATTTTTGGGTCTTATACCTCGGC
TCTTCTGAAGCTATGGGACAATATATTACGCGCCTACCGGAAGGAAAACG
TGTACTTGGGAGAGGCGGCCCGTTTGCTGGCCACGCATACCATGTACACA
TGCCCAAGCCTGCAACGACGTATCACCGGGTATGAAAAACAGGTGGAGGA
CTGTGAGCGTCGTCTGAACGATTATCGTCAAGCAATCAAGGAAGGAAATG
CGCGTTACCGTGCGGCGTGCGAGGCATGGGGTCTGGATGTGGAACAGACG
GGGATAGGAAGGGAGAGAAAAAGCTTGGCCCCCCCCCCCAATGGTGCGGA
GAAAGAAGTATGGAGGTCGCTGCTCACACGTATGGCCGAGAAAGAGCTAC
CGGAAGCCTTGACAGCGGTCGAAAGGGAGTTGTGTGCGGAATTGATAGGA
AAGGCATTGGACTACTACGATCGCTTTCGGAGATTTCTTCACACGCACGA
CGAGGACCGTACCGAAGCCAATTCAGCGGCAGACGAGCAGAAGAACGAGG
AAGGCGGGAGAAAGACATGCGTGGTGGAAGTCGAGGGGAGGTTGGAAGAT
CGATTCTCAACGCTTTGTCAAGCCCGCTGCCACCGGAGGGCATGCCCACG
CGAGCAAAAAAAACAAAGCTTGGGCGCAGAGACCGGGGCCAATGATCAGG
ATGCCCGAAGGATGGGAGGTGGCATCCCCGCAGACGAATCCTCTGTTCAG
GAAGGGGAGAAAGTGGGGATGAACAGGAGCGGAGCATCTGGGCATTGCTC
GTGGGTGGCGGGCGGCCATTCGTGCACGTCATCGGCATGGAGAACAGAAG
GAGACAATCCGAAAGCTTCCCCCATCGGGAACCCAGCCTTCCGGAAGGCC
CTGACAAACGAGCTTCTAGAACTCGAAGCTTTCTTGCAACAGCGACGTTT
GGAAGTGGGCGACGCAGACCACGTGCTCCTGGTCAGTATCCACTGCCGGG
AGGCCGTCGGGGGCCTCCTCGACAACTCCAAGGAGGCAGTAGAGACCTGC
CTGAGCCAGGTCCAAACGGCACTGGATGCAGTACAAGGAAAGCGCCTGCA
GCAGCTGCTCCTCCTCCAATCCTCCCCGGCCTACCTGGAGCGCGTTGCCG
CTTCCATGGAGCAGGCACGAAGGCGGCTTGTCAATCTCGAAGACAGACGA
CGGGAGACGGAGGCCCGCCGCAAAGACATCCTGCTCAAACTGGCACAGAC
AGTCCCGGAACGCGAGGCGACCGCGGCCGCGACCATCGCGCTGAAAAAAA
AGATGGAGGCCTCGTTGCAAGAGCTCTACAACGGCAGGAGCATTGTGATC
ACGGGCGGCGTCGAAACTTTCTCAGTACAAGCTCATGGCGCCAACCAGTA
A back to topprotein sequence of rna8350 >rna8350-protein ID=rna8350-protein|Name=rna8350|organism=Nannochloropsis gaditana|type=polypeptide|length=618bp
MMKCCSLLLAVAMPMFAAGFMPTAPVSGSSWLSTRGLPHRCVSASAAANA
PSPRLFSRLTLRASGAGGFDSKVFKKTPISLGGTQEEIVKGGRDLFPLLP
QAFEGIKQIGIIGWGSQAPAQGQNLKESLAGTGVKVKVGLRKSSPSWQLA
ESVGFTEKDGTLGEMFDVIKESDMVILLISDAAQVKLHKEIFAALKPGAT
LGLSHGFLLGYLQSIGSDFPEGINVIAVCPKGMGPSVRRLYEQGKTVNGA
GINSSFAVHKDANGKATELALGWGVAIGSPFLFKTTMTEEYKSDIYGERG
ILLGAVHGIIETLFRRYVAEGMTPEQAFKESAESITGPITKIISKEGVLK
LYNSLSAADKEVFNKAYSATYKPAREILQEIYDEVASGNEIRSVVMHSER
LSEFPVGKIDGTYTWQVGETVRAARKEDEIPLNPFTAGVYVATMMAQIDV
LRKAGHSFSEIVNESVIEAVDSLCPYMHYKGVAFMVDNCSITARLGSRKW
APRFDYILDQLAYTAVDNSVPVNQELIGDFLKNPVHDAISVCCSLRPPVD
ISCAAPSTALWYGIALRLSRCVHDCVREALGVGLLMGKNPARLLQLSRGG
ELIWKRNKDGDLVSRRGI back to topmRNA from alignment at KK037248.1:443499..445655- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8350 ID=rna8350|Name=rna8350|organism=Nannochloropsis gaditana|type=mRNA|length=2157bp|location=Sequence derived from alignment at KK037248.1:443499..445655- (Nannochloropsis gaditana)
ATGATGAAGTGCTGCAGCCTCCTCCTGGCCGTGGCCATGCCTATGTTTGC
CGCTGGCTTCATGCCTACAGCTCCTGTTTCAGGTACGTCGCGAATCCCTG
TGAACTGAAGGTGTACGATGCTACGAGGTAGTCGTCTCCCAAATTAATCA
GAGGGAACGGGAGGCGACACCAATCCCGCTCTTTTTATGTCATGCATGTT
CGAGCCAGCGATCCCACCCGCGCCTCTGTACGACGAGATATGGCGGCGTA
TGTATGGCGATCGAGAACGGGGGAGTGCTCGGTCAGCTCTTGCAAGCCTG
TGTGTCCCACCTATCCCTCCTTTCCCCAGGCTCAAGTTGGTTGTCTACCC
GCGGCCTCCCACACCGGTGCGTCTCCGCGTCCGCTGCCGCCAACGCCCCT
TCCCCCCGTCTTTTCTCCCGCCTGACCCTGCGTGCCTCTGGTGCCGGTGG
CTTCGACTCGAAAGTCTTTAAGAAGACCCCCATCTCTCTGGGGGGCACCC
AAGAGGAGATTGTCAAGGGGGGGCGCGACCTGTTTCCCCTCCTCCCTCAA
GCCTTTGAGGGCATCAAGCAGATCGGCATCATCGGATGGGGCTCCCAAGC
ACCGGCGCAGGGACAGAACCTGAAGGAGTCGTTGGCGGGGACGGGCGTGA
AGGTCAAGGTGGGGTTGCGCAAGTCCTCGCCGTCCTGGCAGCTGGCCGAG
TCGGTGGGATTCACCGAGAAGGACGGGACTCTGGGCGAGATGTTCGACGT
GATCAAGGAGTCGGACATGGTCATCCTCCTCATCTCGGACGCGGCCCAGG
TCAAGCTGCACAAGGAGATCTTCGCGGCGCTCAAACCCGGGGCGACCTTG
GGGCTCTCCCACGGCTTTTTGCTCGGCTACCTCCAGAGCATCGGCTCCGA
CTTCCCCGAAGGCATCAACGTGATCGCCGTGTGCCCCAAGGGCATGGGTC
CTTCCGTCCGTCGCCTGTACGAGCAGGGCAAGACCGTGAACGGGGCAGGG
ATCAACTCCTCCTTCGCGGTCCACAAGGACGCGAACGGAAAAGCCACCGA
ACTGGCCCTGGGGTGGGGGGTGGCGATCGGGTCGCCCTTCTTGTTCAAGA
CGACCATGACCGAGGAGTACAAGTCGGACATTTATGGGGAGCGTGGCATC
CTCCTGGGGGCCGTGCACGGCATCATTGAGACGCTCTTCCGCCGGTACGT
GGCGGAGGGGATGACGCCCGAGCAGGCGTTCAAGGAGTCCGCGGAGAGCA
TCACGGGGCCCATCACCAAGATCATCTCCAAGGAGGGGGTCCTCAAGCTC
TACAATTCGCTCTCGGCGGCGGACAAGGAGGTTTTCAACAAGGCGTACTC
GGCCACCTACAAACCCGCGCGCGAGATCCTCCAAGAGATCTACGACGAGG
TTGCAAGCGGGAACGAGATCCGGTCCGTCGTCATGCACTCGGAGCGCTTA
AGCGAATTCCCCGTGGGGAAGATTGACGGCACGTACACGTGGCAGGTGGG
GGAGACGGTGCGGGCCGCGAGGAAAGAGGACGAGATCCCCCTCAACCCCT
TCACGGCGGGCGTGTACGTGGCAACGATGATGGCCCAGATCGACGTGCTG
CGCAAGGCCGGGCATTCTTTCTCGGAGATTGTCAACGAGTCTGTGATCGA
GGCGGTGGACTCCCTGTGCCCCTATATGCACTACAAGGGCGTGGCCTTCA
TGGTGGACAACTGCTCCATCACCGCCCGCTTGGGTTCAAGGAAATGGGCT
CCACGCTTTGACTACATCTTGGACCAGCTGGCCTACACAGCCGTCGACAA
CAGCGTTCCCGTCAATCAGGAGTTGATTGGGGATTTCTTGAAAAACCCTG
TGCATGATGCCATTTCTGTGTGCTGCAGCTTGCGCCCACCTGTGGACATC
TCATGTGCGGCGCCTTCCACGGTGAAGGAAATTTCGCTGAAGTAAATTTT
CAGCCACTTATCTGGATGAAAAAGGCACTTTGGTATGGGATAGCCCTCAG
GCTCTCGCGTTGTGTACATGATTGCGTGCGAGAGGCCCTGGGAGTGGGGT
TGCTCATGGGAAAGAATCCTGCCCGTCTGCTGCAGCTTTCCCGAGGCGGG
GAATTGATTTGGAAACGGAATAAAGATGGGGATTTGGTATCAAGACGTGG
AATATAG back to topCoding sequence (CDS) from alignment at KK037248.1:443499..445655- >rna8350 ID=rna8350|Name=rna8350|organism=Nannochloropsis gaditana|type=CDS|length=5571bp|location=Sequence derived from alignment at KK037248.1:443499..445655- (Nannochloropsis gaditana)
GCACTTTGGTATGGGATAGCCCTCAGGCTCTCGCGTTGTGTACATGATTG
CGTGCGAGAGGCCCTGGGAGTGGGGTTGCTCATGGGAAAGAATCCTGCCC
GTCTGCTGCAGCTTTCCCGAGGCGGGGAATTGATTTGGAAACGGAATAAA
GATGGGGATTTGGTATCAAGACGTGGAATATAGGCTCAAGTTGGTTGTCT
ACCCGCGGCCTCCCACACCGGTGCGTCTCCGCGTCCGCTGCCGCCAACGC
CCCTTCCCCCCGTCTTTTCTCCCGCCTGACCCTGCGTGCCTCTGGTGCCG
GTGGCTTCGACTCGAAAGTCTTTAAGAAGACCCCCATCTCTCTGGGGGGC
ACCCAAGAGGAGATTGTCAAGGGGGGGCGCGACCTGTTTCCCCTCCTCCC
TCAAGCCTTTGAGGGCATCAAGCAGATCGGCATCATCGGATGGGGCTCCC
AAGCACCGGCGCAGGGACAGAACCTGAAGGAGTCGTTGGCGGGGACGGGC
GTGAAGGTCAAGGTGGGGTTGCGCAAGTCCTCGCCGTCCTGGCAGCTGGC
CGAGTCGGTGGGATTCACCGAGAAGGACGGGACTCTGGGCGAGATGTTCG
ACGTGATCAAGGAGTCGGACATGGTCATCCTCCTCATCTCGGACGCGGCC
CAGGTCAAGCTGCACAAGGAGATCTTCGCGGCGCTCAAACCCGGGGCGAC
CTTGGGGCTCTCCCACGGCTTTTTGCTCGGCTACCTCCAGAGCATCGGCT
CCGACTTCCCCGAAGGCATCAACGTGATCGCCGTGTGCCCCAAGGGCATG
GGTCCTTCCGTCCGTCGCCTGTACGAGCAGGGCAAGACCGTGAACGGGGC
AGGGATCAACTCCTCCTTCGCGGTCCACAAGGACGCGAACGGAAAAGCCA
CCGAACTGGCCCTGGGGTGGGGGGTGGCGATCGGGTCGCCCTTCTTGTTC
AAGACGACCATGACCGAGGAGTACAAGTCGGACATTTATGGGGAGCGTGG
CATCCTCCTGGGGGCCGTGCACGGCATCATTGAGACGCTCTTCCGCCGGT
ACGTGGCGGAGGGGATGACGCCCGAGCAGGCGTTCAAGGAGTCCGCGGAG
AGCATCACGGGGCCCATCACCAAGATCATCTCCAAGGAGGGGGTCCTCAA
GCTCTACAATTCGCTCTCGGCGGCGGACAAGGAGGTTTTCAACAAGGCGT
ACTCGGCCACCTACAAACCCGCGCGCGAGATCCTCCAAGAGATCTACGAC
GAGGTTGCAAGCGGGAACGAGATCCGGTCCGTCGTCATGCACTCGGAGCG
CTTAAGCGAATTCCCCGTGGGGAAGATTGACGGCACGTACACGTGGCAGG
TGGGGGAGACGGTGCGGGCCGCGAGGAAAGAGGACGAGATCCCCCTCAAC
CCCTTCACGGCGGGCGTGTACGTGGCAACGATGATGGCCCAGATCGACGT
GCTGCGCAAGGCCGGGCATTCTTTCTCGGAGATTGTCAACGAGTCTGTGA
TCGAGGCGGTGGACTCCCTGTGCCCCTATATGCACTACAAGGGCGTGGCC
TTCATGGTGGACAACTGCTCCATCACCGCCCGCTTGGGTTCAAGGAAATG
GGCTCCACGCTTTGACTACATCTTGGACCAGCTGGCCTACACAGCCGTCG
ACAACAGCGTTCCCGTCAATCAGGAGTTGATTGGGGATTTCTTGAAAAAC
CCTGTGCATGATGCCATTTCTGTGTGCTGCAGCTTGCGCCCACCTGTGGA
CATCTCATGTGCGGCGCCTTCCACGATGATGAAGTGCTGCAGCCTCCTCC
TGGCCGTGGCCATGCCTATGTTTGCCGCTGGCTTCATGCCTACAGCTCCT
GTTTCAGGCACTTTGGTATGGGATAGCCCTCAGGCTCTCGCGTTGTGTAC
ATGATTGCGTGCGAGAGGCCCTGGGAGTGGGGTTGCTCATGGGAAAGAAT
CCTGCCCGTCTGCTGCAGCTTTCCCGAGGCGGGGAATTGATTTGGAAACG
GAATAAAGATGGGGATTTGGTATCAAGACGTGGAATATAGGCTCAAGTTG
GTTGTCTACCCGCGGCCTCCCACACCGGTGCGTCTCCGCGTCCGCTGCCG
CCAACGCCCCTTCCCCCCGTCTTTTCTCCCGCCTGACCCTGCGTGCCTCT
GGTGCCGGTGGCTTCGACTCGAAAGTCTTTAAGAAGACCCCCATCTCTCT
GGGGGGCACCCAAGAGGAGATTGTCAAGGGGGGGCGCGACCTGTTTCCCC
TCCTCCCTCAAGCCTTTGAGGGCATCAAGCAGATCGGCATCATCGGATGG
GGCTCCCAAGCACCGGCGCAGGGACAGAACCTGAAGGAGTCGTTGGCGGG
GACGGGCGTGAAGGTCAAGGTGGGGTTGCGCAAGTCCTCGCCGTCCTGGC
AGCTGGCCGAGTCGGTGGGATTCACCGAGAAGGACGGGACTCTGGGCGAG
ATGTTCGACGTGATCAAGGAGTCGGACATGGTCATCCTCCTCATCTCGGA
CGCGGCCCAGGTCAAGCTGCACAAGGAGATCTTCGCGGCGCTCAAACCCG
GGGCGACCTTGGGGCTCTCCCACGGCTTTTTGCTCGGCTACCTCCAGAGC
ATCGGCTCCGACTTCCCCGAAGGCATCAACGTGATCGCCGTGTGCCCCAA
GGGCATGGGTCCTTCCGTCCGTCGCCTGTACGAGCAGGGCAAGACCGTGA
ACGGGGCAGGGATCAACTCCTCCTTCGCGGTCCACAAGGACGCGAACGGA
AAAGCCACCGAACTGGCCCTGGGGTGGGGGGTGGCGATCGGGTCGCCCTT
CTTGTTCAAGACGACCATGACCGAGGAGTACAAGTCGGACATTTATGGGG
AGCGTGGCATCCTCCTGGGGGCCGTGCACGGCATCATTGAGACGCTCTTC
CGCCGGTACGTGGCGGAGGGGATGACGCCCGAGCAGGCGTTCAAGGAGTC
CGCGGAGAGCATCACGGGGCCCATCACCAAGATCATCTCCAAGGAGGGGG
TCCTCAAGCTCTACAATTCGCTCTCGGCGGCGGACAAGGAGGTTTTCAAC
AAGGCGTACTCGGCCACCTACAAACCCGCGCGCGAGATCCTCCAAGAGAT
CTACGACGAGGTTGCAAGCGGGAACGAGATCCGGTCCGTCGTCATGCACT
CGGAGCGCTTAAGCGAATTCCCCGTGGGGAAGATTGACGGCACGTACACG
TGGCAGGTGGGGGAGACGGTGCGGGCCGCGAGGAAAGAGGACGAGATCCC
CCTCAACCCCTTCACGGCGGGCGTGTACGTGGCAACGATGATGGCCCAGA
TCGACGTGCTGCGCAAGGCCGGGCATTCTTTCTCGGAGATTGTCAACGAG
TCTGTGATCGAGGCGGTGGACTCCCTGTGCCCCTATATGCACTACAAGGG
CGTGGCCTTCATGGTGGACAACTGCTCCATCACCGCCCGCTTGGGTTCAA
GGAAATGGGCTCCACGCTTTGACTACATCTTGGACCAGCTGGCCTACACA
GCCGTCGACAACAGCGTTCCCGTCAATCAGGAGTTGATTGGGGATTTCTT
GAAAAACCCTGTGCATGATGCCATTTCTGTGTGCTGCAGCTTGCGCCCAC
CTGTGGACATCTCATGTGCGGCGCCTTCCACGATGATGAAGTGCTGCAGC
CTCCTCCTGGCCGTGGCCATGCCTATGTTTGCCGCTGGCTTCATGCCTAC
AGCTCCTGTTTCAGGCACTTTGGTATGGGATAGCCCTCAGGCTCTCGCGT
TGTGTACATGATTGCGTGCGAGAGGCCCTGGGAGTGGGGTTGCTCATGGG
AAAGAATCCTGCCCGTCTGCTGCAGCTTTCCCGAGGCGGGGAATTGATTT
GGAAACGGAATAAAGATGGGGATTTGGTATCAAGACGTGGAATATAGGCT
CAAGTTGGTTGTCTACCCGCGGCCTCCCACACCGGTGCGTCTCCGCGTCC
GCTGCCGCCAACGCCCCTTCCCCCCGTCTTTTCTCCCGCCTGACCCTGCG
TGCCTCTGGTGCCGGTGGCTTCGACTCGAAAGTCTTTAAGAAGACCCCCA
TCTCTCTGGGGGGCACCCAAGAGGAGATTGTCAAGGGGGGGCGCGACCTG
TTTCCCCTCCTCCCTCAAGCCTTTGAGGGCATCAAGCAGATCGGCATCAT
CGGATGGGGCTCCCAAGCACCGGCGCAGGGACAGAACCTGAAGGAGTCGT
TGGCGGGGACGGGCGTGAAGGTCAAGGTGGGGTTGCGCAAGTCCTCGCCG
TCCTGGCAGCTGGCCGAGTCGGTGGGATTCACCGAGAAGGACGGGACTCT
GGGCGAGATGTTCGACGTGATCAAGGAGTCGGACATGGTCATCCTCCTCA
TCTCGGACGCGGCCCAGGTCAAGCTGCACAAGGAGATCTTCGCGGCGCTC
AAACCCGGGGCGACCTTGGGGCTCTCCCACGGCTTTTTGCTCGGCTACCT
CCAGAGCATCGGCTCCGACTTCCCCGAAGGCATCAACGTGATCGCCGTGT
GCCCCAAGGGCATGGGTCCTTCCGTCCGTCGCCTGTACGAGCAGGGCAAG
ACCGTGAACGGGGCAGGGATCAACTCCTCCTTCGCGGTCCACAAGGACGC
GAACGGAAAAGCCACCGAACTGGCCCTGGGGTGGGGGGTGGCGATCGGGT
CGCCCTTCTTGTTCAAGACGACCATGACCGAGGAGTACAAGTCGGACATT
TATGGGGAGCGTGGCATCCTCCTGGGGGCCGTGCACGGCATCATTGAGAC
GCTCTTCCGCCGGTACGTGGCGGAGGGGATGACGCCCGAGCAGGCGTTCA
AGGAGTCCGCGGAGAGCATCACGGGGCCCATCACCAAGATCATCTCCAAG
GAGGGGGTCCTCAAGCTCTACAATTCGCTCTCGGCGGCGGACAAGGAGGT
TTTCAACAAGGCGTACTCGGCCACCTACAAACCCGCGCGCGAGATCCTCC
AAGAGATCTACGACGAGGTTGCAAGCGGGAACGAGATCCGGTCCGTCGTC
ATGCACTCGGAGCGCTTAAGCGAATTCCCCGTGGGGAAGATTGACGGCAC
GTACACGTGGCAGGTGGGGGAGACGGTGCGGGCCGCGAGGAAAGAGGACG
AGATCCCCCTCAACCCCTTCACGGCGGGCGTGTACGTGGCAACGATGATG
GCCCAGATCGACGTGCTGCGCAAGGCCGGGCATTCTTTCTCGGAGATTGT
CAACGAGTCTGTGATCGAGGCGGTGGACTCCCTGTGCCCCTATATGCACT
ACAAGGGCGTGGCCTTCATGGTGGACAACTGCTCCATCACCGCCCGCTTG
GGTTCAAGGAAATGGGCTCCACGCTTTGACTACATCTTGGACCAGCTGGC
CTACACAGCCGTCGACAACAGCGTTCCCGTCAATCAGGAGTTGATTGGGG
ATTTCTTGAAAAACCCTGTGCATGATGCCATTTCTGTGTGCTGCAGCTTG
CGCCCACCTGTGGACATCTCATGTGCGGCGCCTTCCACGATGATGAAGTG
CTGCAGCCTCCTCCTGGCCGTGGCCATGCCTATGTTTGCCGCTGGCTTCA
TGCCTACAGCTCCTGTTTCAG back to top
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