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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100067g10.2685.mrna |
| Orig protein id | gnl|cribi|Naga_100067g10.2685 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:299469..300721 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8293 ID=rna8293|Name=rna8293|organism=Nannochloropsis gaditana|type=mRNA|length=5755bp
GAGAAACAACACACAAAAAACCAAAAAAATCTTCCCATTTCATAAAATTA
ATAACAGGCTTTTTAATAGAGACAATTGAGTGTTTATTTTGGAAAACATC
CGCTCAAAAGGACGCCAAGGCAAGCAGAGCCTGAATATAAGCGTTGGAAT
CGCCCCAAGAAGAAATCTACTAGGTGGTCTGGACCTCATACATCATAAAT
ATTGTATTTATGTCGGCGAATGAGCGGCTTTGTGACTATTTTGCGGTCGT
AGGACCAAAAGAAGCCGATCTTGAAAATCGTGTCGTCCAAGAGGATTATT
CTATCGGCAACCTCCACCGAGCTTTGGAGGAAGCAATCGTGGATATTTGT
ATCGTAAATCACCCTAGAGAAGTCATCCCTTTCGAAAAGAACTACGAGCT
CCTCCTGAAACCTGAGCAAGTGGAAGAGGGCCTGGGAGAAGGCGGCAAGC
TTCAGCTCGCCAAACACCGCTATATCTGCTTTCGCCGTCGAAAGCACCGC
AGAACGACCTCGTACATCACAGAAGTCCGACTTGTGTGCAAAAGCCAAGA
ATCTCCACCACAGGGGTTTGAACTCATAGAGAAGACAGTAGGCGGGGCAT
CGGGTGACTTGAGTAGGGGTGGCTCTCAGCAGGTGTATTTAGCAGTGCGT
TATGCCCACGTGGACGAGACGAGTTTTCGATTCTCGATTCCGCCTGTGCT
CGCAGATTTATGCCTCTGCAGTGATGAGAAGGGGGGGTCCGCGCCCATGG
AGTACACCGTGCTTCCCCGGCCTCTGTCAAGGCTCGGGCTGCCTAATGAA
AATATCTATTTAGCCTACCAACAGGGTCCTTCGGCGGGGCTCTGCGACAT
TCCTTACGAAGCTTATTCCCTCGATTGGTTCCCACACGAAGCCACGTACG
AGGATTTTCCCTTGCCGCAGAACGAGCTGCCCATGTTCTGCTTCCCGAAA
GGAGTAGTCCTGAAGCACCAAAAGCGAAACGACACGCCCATGCCCTCCTA
TTTCTCTTTTGTCTTTACATCCATCGACGGAGATCGAGTCCACGTAGCCT
GCCTCCAATTTTACGAGCTGCTACCGGACAGGGTTCTGCGGGCGCTAGAA
GCGAAGCAGCGAATCTTAACTGTGCTGGGCGCGTTCGCTTCGGGAGAGAA
TCCGACAGAAAGTGGAGGGCCGATTTCTTTGGGGGAGTGGGACAGCGACG
AGGAATCGGTAGCCAGCAGCGTCGACGAGGAGGAGGAAGAAAGCGTAGAA
GCCGTGTCCTCGACGTCGGGGCAGGCAGCAGGCGTGGAGACGGGGATCCC
AAAATCGAGCCCGTCCACCCAGCAAAGCCCGGGGCGAAGGGCGGCGACGA
ATCACAACGGGCTGATTAGCCTGAAATGTAAAGAACGGGCTCTCTCCAAG
TCAATATCGACGGGCACAGAGTTACCACGTCAGTCGTCCTTGACTGGCGT
TCCTGTCTCCAAATCCTTCAAGCCGGCAGGTCGGAGCGACCACGCTTTGT
TCGCGCCCAAGTGCATCTGCATCATCAGTCACTGGCCCTTCTATCGAGCG
CTTCGCTCCTTTCTCCAGCAAATTTACCGCATTTCTTTGTCGCCCTCTCG
TGTACCGCTTGAGCGATATATCGCATACTTCACGCACTACATGCCACTTC
CTCCTCCAGGGCAGCACGTTTTGAATTTGCATCTAGATCTGGGAATGCAA
GATCGCATTGAGAATTCGACTTTGGCCCCGATCACATTGCATTTACCTGA
CACTCGAAGTCTTCCTCTTATGGATTTGGATTATGAGGCGCCATTCCGGT
GTCTGAGCTTGGACAATGTACTGAAAATATTTGTTTTGTTGCTTATGGAG
GAAAGGTTGTTGTTCATGTCTTCGTCCACGTCATTGCTCACAGAGGTCAC
TGAGACGATCCTGACTCTCCTGTTCCCCCTAGAATGGACATCATGCTACA
TTCCCCGCCTTCCAAACAAGCTCACAGAAATCCTGGATGCGCCCGGGTCA
TTTCTCATTGGCATCTATATCGAGGGGACAACGGACTCGTGGGTCTTACC
TCAGCTCTCAGACCCGCTTTTTGTCGTTGATTTGGATCATGACTGCATAA
TAGATGCAGAAAACAAAGACTACACTACGGCAATGGAGAACATGCCGATT
TTGGAGGCGCTTCGGGAGAAGCTGCGCACGGAGCTGGATCGCACTGGAGT
GACGGTCAAGTCTGCGGAGGCCCTGCGGGAGGGAGATTCGGCTTTCGAAT
TGCCCGCGGTGCCCGGCTCTCAGGTCGAGGACGGACCCGCAATGAAGCTT
GAATTAAATGTTGATATTGTTCGAGATGCATTTTTAGTTTTTATGTGCGA
GTTGCTGGGCAGCTACACGAGATACTTCAATTCCCAGCAGGCTCAGTTAG
ACGACACAGACGCGTGTGACATGGCACACAACGGTGTCTTTGGAGCTTTC
GATGTGTCAGGGTTCCTGGCCACGGCAGAGAAGACCACGAAGGCGTTGTT
GGAAAGGGTGCTTTTAACACAGATGTTCGCAGCCTTGGTGCAACAACGTA
CCGACCACGGCCGTGGGATAGACCGGCTTGTATTTTTCGAGACCTGCGTG
GAAGAATTGAAGGAGCGCAAGGACGCTGAGGCGGCGGCAACTACAGCAGG
TGCTAACGTTAGTTTAAACATTTATTATGGTGCAGCAAGCAATCCTAAAA
AGCGGCCTGACGACCGGACACTCAGCACGAGGAGCGTGCCTTTGCCCACG
ACGGATTCAGCGAACGGACCCCCCTTACTTATCCACCAAGCGGTAGCCTC
CATGCTACGACGTGAGCAACTCCTCCTGCAGCAGCAACTGCACATGCAGC
TTCAGTCAGGGGCCACTGCGCCATCGGTCTCGCCGTCGACAACGAGTCCG
CAATCTGCTTGCCCTGAAGCTGCCTTGTCTCCGAGACAAAGTCAAAGCTC
TCCCAGCTTTTTCGTCGGTACCCTTCCTCGTATGATTATTATACCAGGTC
CTAGCGCGGAAGGTTGTTATACCCCTCGACAATCTCATTCATATCTCGAG
GGTAATGCAAGCCAGAATCACACACCCAGTGCCATGGCTCAGTCACGAGC
GCTAAGATTCTCATACAAACAGTTTCCGAACACACTAAATAAGACATGGA
TGGATCTACCTCCTTCTTCTTTACCACCGATTTTGCTGGAGATCATATCA
CGTCGCAAAAAGTCCTTGAAGAAAGGAAAGCGCATGATTTTGGCGCGGTC
GGTGTCAGAATGTGTGAAAGATTGGCACACAGTGGGCACCCAAATTGGCG
GGGCCCGGGACAAAGAGATCTACCTCGCCATGCAGATCTTTGGGATCTAT
TTCATGTGTCTGCCTTCTCGGGTTTCTTACAAAGGAAAGCCATTACGGGT
TATCATGCAAGCGATGGGTATACTGCAATATATCTTAGGTTTTGAGCTTG
AAGGGTACATGGACGAAGCAATGTGGCGTTCTTTATTGATAGCCTGTGGG
AGATGCGGCCAGGCATCTACGCGCAAGATTGCCATTGCAATTTTCGGGAT
CATGCGACGTGCCGGGTTATCGATAAATGCATTAACATATGGACAATACA
CGAAAGCCTTGGCAGAAAAGGATGCCGCAGAGTTTGTAGCTACAACAACT
GGTTTGACGCTTGTAACGTCTGGTTGCGGAGAAAGGGGAAGACAAGTCCC
AGACTGCCGGACAGAAATGGGCACCGTTGTTGACGAAACTCGCGGCGGGA
TCGATGACAGCCCTTGGCTTGAGGAAAGAGGCCGTGGGTGGTACTTAGCG
GCATGCGAACCTTCAGCACCAGAAACACTGAAAAATTGGTCGGTCGCGGA
CGGTTTCAAAAGTTTGTTGGCGGGAACGATGAAAGCTGTGGTGTCCAGAA
AAGCCAGGGAACGCCCTGTTTTGCAGGATGGAGACGCGTGGACAAGTGGA
CTGCGGGATCCTCGGGTTTCAGCTCAAAATACAACTCTGAGTTCTATCAC
AATGAATAGTGCAGGTGTGATCGGTATGTGGGTGGTCTGTTTGTGCGTAA
AGTGCGAGTACATGCCTTTGGACGAGGAGATCATGACTTTGCGGCAAGAG
CAGGCGGTGGACGATCAGACCAATCACTTGCTTCTCTGCCCCAAATGCGA
AACACCTCTTATGCCACGTCTCTATTACGACATCAAAACCTTTAAAGACC
ACGTGATGGATTCGTGCAGTATGAAAGGGGAAAAGACAAAAGCGGATTTT
TCGACGCAGGCATCACAAGAAAACATATTAGAAATTTCCTTGTCTTCTTA
TGCAGAGTCATCACTACACTCTAGCGGAGTCAGCACTGGTGGGAATATAT
CGATGCCAACGGAGGCAAACAAGCACGTGACGTCCAAAATGGTGGAGCCA
CAGGCAATATTGGAGCAGGATGTGTCTGGACGGAAAAGACTTTCAGCCTC
GAATGATTTCAGCCCTGCAGCCACTGCATGGGAGGATGCTCTGTCAGGCA
GCGTGGCAGAGAAAACGGCTCGAGAGCAACGAGGGGAAATCTCCGGTTTA
CCCTCTGGCACAACTGGTGGCGACCACGTTGGATATTTGAGTCCATTTAC
TCTCCGCATGCGGTTGGAAAAGCTCCTGTTGGAGGACGGTGAAATGTGTC
TGACACGAGATTGGGCCCGCACGCATCAGCCTGAATTATACTGGAATCTC
GTATGGTTTACCACACGCCTTTCCATACCTTTTCCTTTTTTATTGGACTC
ATTGGACCCAAGTTTTGCAGATGCTGCGATGAATAGTTTCTCGACTACTT
CACCGGACCGCATGGGAAGTAATGCTCAGCCGACGGCCGAAAAGGCGGTG
AAGGGATATTTTTCAAATACTTTTCGGTCAATTCACAGTCCCGGCATGTC
CCGCCAAGACTCGACAGAGCGCCTGGCCCAATTCTTCTTCCACGAAGTCG
TTGTAGTAGGCTGGGAAGGGGAAGTGGTACGAAATCGATGCGAGAAAGTA
GAGACCATGTTGAAGCAGCGATCTTTTGAGCTGCGCGTAACGCCTCCAAA
GGCGTCGTCGAATGTCGGCAGTTACACAATCACAGGGGCGGGGGTCCTGC
CTACATTCCAGTTGTCTGTCCCATCGATTTCAACCACCATGACGCTAAGT
GAGGCCTTGCGACAACAAATCATTGGGGTGGAAACAGCCATGGCAAAAAC
TGTAGAATACTCCGACGCCATTGGACCTCTGACGGTGGCGCAGCTTCTCC
CGAATATCTCGACACAGGAATTGGAGGCCATTGAAGAGGTAAAAAGAATC
CTACTTATTGAGGGATGCGCTGGTCTGAAAGAGGCCATCACTCAATTTTT
TATCCTGAAGGAAAAACAGGGCGGTTGGACGTCGGAGGCGTCATTAGGAT
CACCATACCGCGTCTTTTTGAAACTTGCCGCCAATTTCCACATAAAGAAA
CTGCATAACATCGCCCCCATTTCAAATCTCATGGCAAATCCTGGATTGGA
GCACGAATATACTACTGCTGTCATGAGGTTGGGGGACAGGTTTGTGAGAG
AGAAAGCGGGACAAGACGAACGGCAATTACTTGCGGAGCTGCCAAAGCGA
GACGCCATCAAATTCAGGTCAGCATTTGGGCCTCTTTATTAAGCGTTTTC
GCAGAGAGACCTCGGACGTATTGTATTTACCGATGAATGCTTGTGTTGAA
TGTAAGCGAAACACCTTGTAAAAAGGAAAGGCAAATCCATATTGAATGAT
GTATT back to topprotein sequence of rna8293 >rna8293-protein ID=rna8293-protein|Name=rna8293|organism=Nannochloropsis gaditana|type=polypeptide|length=136bp
MSYEPTFHLATNGICGGLEIFLPKSSEAFVHFDCSEARSWSYGLGALNQG
MRALTVAKETEIRKCERDCSTTWIQELHQNDQEQGRADIAHLVMVDEHRR
GLQLFRRGLLGIHVKHFLKVESIRRSWKCLHRSSTE back to topmRNA from alignment at KK037248.1:299469..300721+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8293 ID=rna8293|Name=rna8293|organism=Nannochloropsis gaditana|type=mRNA|length=1253bp|location=Sequence derived from alignment at KK037248.1:299469..300721+ (Nannochloropsis gaditana)
ATGTCGTACGAGGTAAGAGGGCGGTAAATGTATGTATATTTGGCGGCGTT
CAGTAAAAATGATGGCCAGACCAGTAGATGCTGAGACCTCCTCATGCCTA
GTATTGTCCTCATTTAAATAGCCGCGAAAGGCTGCTCTTCGCCTCACCTT
AGAAGAACAAGGAGTCCTGACCACTTGCGAGGTCCGGGCTCTCGAAGCAG
GCGAAGATGCCTTTGACTtggcggccctggcctccgcctttcgCAGTCGC
CCAGAGGTCCTTCGCGCCATCCTAAAGAGCGACGTCCTGAAAGAAGCCAT
CTCCGAGCTTTCCGATCTGCCCGGAGCGGGCTCTGTCCGTGTTTCCGTCG
CACCGCATGAGCCGACTTTCCATCTGGCGACCAATGGGATCTGTGGAGGC
CTGGAGATATTCTTGCCTAAGAGCAGCGAGGTAGGTCGTACCTTTTTATC
AGAGCATACAATAGGCCGACATTTTTTGTCTCAGAGTCCAATGATTTTTA
TATGCCAGTCTCACCAGTATAATATCAAGTGCGGTCATGTGAAGTTAAGC
TATTTTCACTCTTCTCTCGGTCCACCGACAGTGACGTAAATTGAATTGAC
GCATGTGCCAGTCTCTTTATATTCTCCTTGTCTCATTCTTCCGACAAAAT
GATTGtgcgtccttctcgtcaATTCTTGAATGCTCGATCGTCGCAGGCTT
TTGTGCACTTTGACTGCTCGGAGGCCCGCTCTTGGAGCTATGGTTTAGGT
GCCTTAAATCAAGGAATGCGCGCCCTTACTGTGGCGAAAGAAACGTACGT
ACGGATAAACGAAGAGGGGATAATGTGCGTGCAGCATCAGGTAGAGAACA
CAGCGAGTGGACAAAGCACCTTTATAGACTTTCTGTGCCTTGctgaggag
acagaggaaggaagaggggaaaatgaggagcatgaagacgaagaaaggCA
AGAGTGACGCGGAACAAAGATTCGACGCAGCTGCGACTATGTATGTTTAT
CATTTTTTGGCTTTTATAAAGAGAGATCCGTAAATGTGAGAGGGATTGCA
GTACAACGTGGATACAGGAGTTGCATCAAAACGACCAAGAACAAGGACGA
GCCGACATCGCTCATTTGGTGATGGTGGACGAACATCGTAGAGGCTTGCA
GCTTTTCCGCAGAGGACTTCTTGGGATACATGTAAAGCATTTTCTGAAAG
TAGAATCAATCCGACGCTCGTGGAAATGTCTGCATAGGTCGAGCACGGAG
TGA back to topCoding sequence (CDS) from alignment at KK037248.1:299469..300721+ >rna8293 ID=rna8293|Name=rna8293|organism=Nannochloropsis gaditana|type=CDS|length=1644bp|location=Sequence derived from alignment at KK037248.1:299469..300721+ (Nannochloropsis gaditana)
ATGTCGTACGAGCCGACTTTCCATCTGGCGACCAATGGGATCTGTGGAGG
CCTGGAGATATTCTTGCCTAAGAGCAGCGAGGCTTTTGTGCACTTTGACT
GCTCGGAGGCCCGCTCTTGGAGCTATGGTTTAGGTGCCTTAAATCAAGGA
ATGCGCGCCCTTACTGTGGCGAAAGAAACAGAGATCCGTAAATGTGAGAG
GGATTGCAGTACAACGTGGATACAGGAGTTGCATCAAAACGACCAAGAAC
AAGGACGAGCCGACATCGCTCATTTGGTGATGGTGGACGAACATCGTAGA
GGCTTGCAGCTTTTCCGCAGAGGACTTCTTGGGATACATGTAAAGCATTT
TCTGAAAGTAGAATCAATCCGACGCTCGTGGAAATGTCTGCATAGGTCGA
GCACGGAGTGAATGTCGTACGAGCCGACTTTCCATCTGGCGACCAATGGG
ATCTGTGGAGGCCTGGAGATATTCTTGCCTAAGAGCAGCGAGGCTTTTGT
GCACTTTGACTGCTCGGAGGCCCGCTCTTGGAGCTATGGTTTAGGTGCCT
TAAATCAAGGAATGCGCGCCCTTACTGTGGCGAAAGAAACAGAGATCCGT
AAATGTGAGAGGGATTGCAGTACAACGTGGATACAGGAGTTGCATCAAAA
CGACCAAGAACAAGGACGAGCCGACATCGCTCATTTGGTGATGGTGGACG
AACATCGTAGAGGCTTGCAGCTTTTCCGCAGAGGACTTCTTGGGATACAT
GTAAAGCATTTTCTGAAAGTAGAATCAATCCGACGCTCGTGGAAATGTCT
GCATAGGTCGAGCACGGAGTGAATGTCGTACGAGCCGACTTTCCATCTGG
CGACCAATGGGATCTGTGGAGGCCTGGAGATATTCTTGCCTAAGAGCAGC
GAGGCTTTTGTGCACTTTGACTGCTCGGAGGCCCGCTCTTGGAGCTATGG
TTTAGGTGCCTTAAATCAAGGAATGCGCGCCCTTACTGTGGCGAAAGAAA
CAGAGATCCGTAAATGTGAGAGGGATTGCAGTACAACGTGGATACAGGAG
TTGCATCAAAACGACCAAGAACAAGGACGAGCCGACATCGCTCATTTGGT
GATGGTGGACGAACATCGTAGAGGCTTGCAGCTTTTCCGCAGAGGACTTC
TTGGGATACATGTAAAGCATTTTCTGAAAGTAGAATCAATCCGACGCTCG
TGGAAATGTCTGCATAGGTCGAGCACGGAGTGAATGTCGTACGAGCCGAC
TTTCCATCTGGCGACCAATGGGATCTGTGGAGGCCTGGAGATATTCTTGC
CTAAGAGCAGCGAGGCTTTTGTGCACTTTGACTGCTCGGAGGCCCGCTCT
TGGAGCTATGGTTTAGGTGCCTTAAATCAAGGAATGCGCGCCCTTACTGT
GGCGAAAGAAACAGAGATCCGTAAATGTGAGAGGGATTGCAGTACAACGT
GGATACAGGAGTTGCATCAAAACGACCAAGAACAAGGACGAGCCGACATC
GCTCATTTGGTGATGGTGGACGAACATCGTAGAGGCTTGCAGCTTTTCCG
CAGAGGACTTCTTGGGATACATGTAAAGCATTTTCTGAAAGTAGAATCAA
TCCGACGCTCGTGGAAATGTCTGCATAGGTCGAGCACGGAGTGA back to top
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