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Properties
| Property Name | Value |
|---|
| Product | ariadne-like ubiquitin ligase |
| Orig transcript id | gnl|cribi|Naga_100011g90.3465.mrna |
| Orig protein id | gnl|cribi|Naga_100011g90.3465 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:262134..264499 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8278 ID=rna8278|Name=rna8278|organism=Nannochloropsis gaditana|type=mRNA|length=1689bp
TAACAGGTGACGCCTCCCAGTCCAGAGCGCCAGACAATGGAGGAAAGTAC
GTTCAAACGCTTCATCTGGCAACGGCTAGCGCTATTTATACGCGTTTTCA
GGCCTTGATCATTCCTTTTTGAGACGATGCTAAGGACATTAGACGATAAG
TATGTTTTGGAATACAAACACGAAGTGCAAGGTCGCCAGGAAGGGGCATA
GCTTGATAGAGCGTGTCTGCGGGCATCGCAGAGGCTGTGAAGTGCATCAC
ATACGGAGTTAACCTCCCGGCTCCAGGTCGCTATGGCCTCCATGTCCGAC
TGCATGGCAACAACAATGGGGCGTCTCGCGCACGGCACACGCACACGTGC
ACACGGGGACTTTTTTTTTCCTCATTCCACCTCCCGATTGACCCTCATTC
AGGAAAATGATTCCTCGTCCTCTCTTCGGGTCCCTTTTCCTCGTATTGCT
TCTGACCTGGCCACGACAGGCACCATCACTGGTATTCAAGCACGCCCACA
TCATGGCGACGCAGCTTTCTATTACTTCGCGTGATCCACACGCCAACATG
CCAATCCTGGGATTGGGTACGTGGCGATCTGACAAAGGCAAGGTTAAAGA
CGCAGTCGTGGAGGCCTTGCGCCTGGGTTACATCCATGTAGATGCAGCTC
AGGTGTACGAGAACCAATGCGAGGTTGGAGAGGGGCTGCATGAGGCGCGA
GCGAAGGGATATATCAAAGAGATGAATGACGTCTGGATTACAAGCAAGCT
GTGGAACACGGACCACCACCCCGATGCGGTGCGGCCCGCCTGCGACCGGA
TTTTGCGGGAACTGAAACTACCGAAGATCCAACAGCTCTTGATCCACTGG
CCAACCGCGTTCCAGAAAGTGAAGGGAGAGGAAAATTTGTGGCCCAAGGA
CGCCCAGGGCCGGCATTTAAGCGACCCGAACGGCGACAACAAAGCCGTGT
GGAAGGAGATGGAGAAGCTGGTGGACGCAGGCCTGGTGGAAACGATAGGG
CTGTCGAACTTCAACGAGCAAGAAGTGCAAGAGATCCTGGACGTGGCTCG
AATCAAGCCGGTCTGTGTGCAGATCGAGTGCCACCCCTACCTCCCGCAGG
ACGAGATGCGCGCCTTCCTCCACTCCCAGGGCATTGCCCTTTGCGCGTAC
TCCCCCTTGGCGAACCTGGACCCCAACGATGCGAGTAAGCCGTGCGCGCT
CCGAGACCCCGTGATTGAGCGGTTGGCCCGTAAGCACGGCAAGAGCCCCG
CACAGGTGATCCTCCGTTGGCACGCTCAGAAGAAGAACGTGGTCATCCCC
AAGAGCGTCACCCTCTCGCGCATCGCCGAGAACGCGGGCATTTACGACTT
TGAACTCTCCGAGGAGGACATGGCCCTGATCGCGGGGATGGGCAAGACGC
ACCGGGTCCGTTTGGTCAATCCGGGCTTTCGACCGGGGGGGCAGCCCGTC
TTCAGTCAGTAGGCCCTCGGAGGGAGGGGACGGGGAGAGCGCACGCGCCC
GGGCATAGACATGGGGCACAAATCTAGAAAATGTTCCCGAATACATGAAG
CGGCGGTGCAGGTGGTGGAGGTGGATGTGGAGATCGTCCTTTTAGGCTCA
AAGGCATATCCGAGAGAGATGAACAATGATCAATGATTCGAACAGACTTT
AACCGCGCGATCCATGCGATGCTCGCATACGTATTCTTT back to topprotein sequence of rna8278 >rna8278-protein ID=rna8278-protein|Name=rna8278|organism=Nannochloropsis gaditana|type=polypeptide|length=561bp
MSGMESSDGEEYTYQDESGEEVVGGVESQEEEEEYSYSDGEGGGAPVPLP
PPSSSMADGCKVIDADELRATMSALIDDISSVLAIHPCAAAALLRHYNWN
KESVIDSFCTDPDQAKEKAGIMRFVPDLQTSDKGRLCGICREDVPAEALV
ALGCGHFFCRGCFTQYLVSKVEEGMGCPLTRCPEYRCPEMVTENFFRVLV
PPATLAAYLRYSLKSFVDICSAFRWCPGRGCDFVAMGNSSLRACLCKCGM
LFCFRCGEEAHVPASCEDMVTWVEKCKNESETANWILANTRKCPKCATRI
EKNQGCNHMTCRQCKFEFCWICMGPWTEHGANTGGYYKCNKYDPSTPTKD
EQDGAKAKAELDRYLHYYQRYDNHHKAQEYATKQEEEIERRMMRLQETDG
SRWIDVQFLKVANEKLVECRRVLKYTYVFGYYLPEGTARKRLFEHHQENL
EKFTEHLSWLSEQSLEEFKKEEKRSEVVNYTRVTETFLKNLLKSVEDGLM
DEDGEDMEEGGWEGKAEPGRRAGAAGGGQVGEAAEEGRPTLPSRDGAGGG
GRARRSGVARA back to topmRNA from alignment at KK037248.1:262134..264499- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8278 ID=rna8278|Name=rna8278|organism=Nannochloropsis gaditana|type=mRNA|length=2366bp|location=Sequence derived from alignment at KK037248.1:262134..264499- (Nannochloropsis gaditana)
TTTTTTTTTAACATGTTGCAACAGCAGCCCAAACCCAGTACAGGAGCACG
CCGAGAAATGTGTTGGTCTTCTTCCACTTCTCTTTTCCTCTCTCCTCACC
GAGAAAATTATCCCTGATCACACCCTACCAGTACAGAATAAGTATAAACG
TACAGTCACAAGGCGTGCGTGCACCCGCACGAACTACCAATAAGGTGAGT
ATCGGCTTCTAGTAGCACAGTCATGGCCAGCCCCAAGACGGCGTCTTGCG
TTGGGTTCGCACACGCGTTCTGATGACGCGATAGCTCCCTTCCTTAAGGA
TATGCAGTGTTTTTTCCCAACATGTGGCTTGTCCATATCTGTCCTACTGG
ATTGTTTCGTTGGCTTGTCTTATCGCACGGGAGGGGCGCTTCACTTATAG
GACGTCGCACTCAAGCCCCGTTGCTGGACGGATGGCGATCTCTCCGTCCA
TTATCACAGGGTCTCACGTCCTGAAGCGCCGGCACGGGATGTCTGGTATG
GAGAGCAGCGACGGCGAGGAGTACACTTACCAGGACGAAAGCGGGGAGGA
GGTTGTGGGGGGCGTGGAGAGTCAGGAGGAGGAGGAGGAGTACAGCTATT
CAGACGGGGAGGGGGGGGGTGCTCCTGTGCCCCTCCCGCCGCCCTCATCC
TCCATGGCGGACGGATGCAAGGTGATCGACGCGGACGAGCTGCGAGCCAC
CATGTCGGCCCTCATTGACGATATCTCCAGCGTCCTCGCCATCCACCCCT
GCGCGGCTGCCGCCCTTCTCCGCCACTACAATTGGAACAAAGAATCGGTC
ATCGACTCTTTCTGCACGGACCCAGACCAGGCCAAGGAGAAGGCGGGGAT
CATGCGCTTTGTCCCGGACCTGCAGACCTCGGACAAGGGCCGGCTCTGCG
GGATATGCCGGGAGGACGTGCCCGCCGAGGCCCTGGTCGCTCTCGGCTGC
GGCCACTTCTTCTGCCGGGGCTGTTTCACGCAGTACCTGGTCAGCAAGGT
GGAGGAGGGGATGGGCTGCCCGCTCACCCGCTGTCCGGAGTATCGGTGTC
CTGAAATGGTGACGGAGAATTTCTTTCGCGTCCTAGTGCCTCCCGCCACC
CTGGCGGCCTATTTGCGCTACAGCCTCAAGTCCTTTGTCGACATCTGCAG
CGCCTTCCGCTGGTGCCCAGGACGGGGCTGCGACTTCGTGGCCATGGGCA
ACAGCTCCCTCCGGGCCTGTCTGTGCAAGTGTGGGATGCTCTTCTGCTTC
CGCTGCGGCGAGGAGGCCCACGTGCCTGCGTCCTGCGAGGACATGGTCAC
TTGGGTGGAGAAGTGTAAGAACGAGTCGGAGACGGCCAACTGGATCCTGG
CAAATACCCGGAAGTGCCCAAAATGCGCCACGCGCATTGAGAAGAACCAA
GGCTGCAACCACATGACTTGTCGCCAGTGCAAGTTCGAGTTCTGCTGGAT
CTGCATGGGCCCCTGGACCGAGCATGGCGCCAACACTGGGGGGTACTACA
AGTGCAACAAGTACGACCCGTCGACGCCTACAAAGGACGAGCAGGACGGG
GCCAAGGCGAAGGCAGAGGTAAGCCTGAATTGGGGGGGACTCTGTTTGTC
GTGTCGCGTGGGGGGGCTGTCCTCGCGCGCAGGCGTCAGGACCGTGTCGG
TGCGGAGGCTGTCTCTGCGTCGAGCAGGATTTGATTGTTTGTTGCGGGGC
ACATTTTCACCCCTCTCGAATCCGCTCCGCCCTACTGCCTCTCCTTTCGT
GTCCATACAGCTGGACCGCTACCTGCACTACTACCAGCGGTACGACAATC
ACCACAAGGCGCAGGAGTACGCGACCAAGCAAGAGGAGGAGATTGAACGT
CGGATGATGCGTCTCCAGGAAACGGACGGCTCACGCTGGATCGACGTCCA
GTTCTTGAAGGTGGCGAACGAGAAGCTGGTGGAGTGCCGGCGAGTGTTGA
AGTACACCTATGTCTTCGGGTACTACCTGCCGGAGGGGACGGCTCGGAAG
CGGCTCTTTGAGCACCACCAGGAGAACCTGGAGAAGTTCACGGAGCACCT
GTCATGGCTGAGCGAACAGAGCTTGGAGGAGTTCAAAAAGGAGGAGAAGC
GGAGCGAGGTGGTGAACTACACCCGTGTGACGGAGACCTTCCTGAAGAAC
CTGCTCAAGAGCGTGGAGGACGGGCTCATGGACGAGGACGGTGAGGACAT
GGAGGAGGGTGGGTGGGAGGGAAAAGCGGAGCCTGGGCGGCGGGCAGGGG
CCGCCGGGGGGGGGCAAGTGGGGGAAGCAGCAGAGGAGGGGCGTCCGACC
CTGCCATCAAGAGACGGCGCGGGTGGGGGGGGTCGGGCCCGTCGGAGCGG
AGTGGCGAGGGCATGA back to topCoding sequence (CDS) from alignment at KK037248.1:262134..264499- >rna8278 ID=rna8278|Name=rna8278|organism=Nannochloropsis gaditana|type=CDS|length=3372bp|location=Sequence derived from alignment at KK037248.1:262134..264499- (Nannochloropsis gaditana)
CTGGACCGCTACCTGCACTACTACCAGCGGTACGACAATCACCACAAGGC
GCAGGAGTACGCGACCAAGCAAGAGGAGGAGATTGAACGTCGGATGATGC
GTCTCCAGGAAACGGACGGCTCACGCTGGATCGACGTCCAGTTCTTGAAG
GTGGCGAACGAGAAGCTGGTGGAGTGCCGGCGAGTGTTGAAGTACACCTA
TGTCTTCGGGTACTACCTGCCGGAGGGGACGGCTCGGAAGCGGCTCTTTG
AGCACCACCAGGAGAACCTGGAGAAGTTCACGGAGCACCTGTCATGGCTG
AGCGAACAGAGCTTGGAGGAGTTCAAAAAGGAGGAGAAGCGGAGCGAGGT
GGTGAACTACACCCGTGTGACGGAGACCTTCCTGAAGAACCTGCTCAAGA
GCGTGGAGGACGGGCTCATGGACGAGGACGGTGAGGACATGGAGGAGGGT
GGGTGGGAGGGAAAAGCGGAGCCTGGGCGGCGGGCAGGGGCCGCCGGGGG
GGGGCAAGTGGGGGAAGCAGCAGAGGAGGGGCGTCCGACCCTGCCATCAA
GAGACGGCGCGGGTGGGGGGGGTCGGGCCCGTCGGAGCGGAGTGGCGAGG
GCATGAATGTCTGGTATGGAGAGCAGCGACGGCGAGGAGTACACTTACCA
GGACGAAAGCGGGGAGGAGGTTGTGGGGGGCGTGGAGAGTCAGGAGGAGG
AGGAGGAGTACAGCTATTCAGACGGGGAGGGGGGGGGTGCTCCTGTGCCC
CTCCCGCCGCCCTCATCCTCCATGGCGGACGGATGCAAGGTGATCGACGC
GGACGAGCTGCGAGCCACCATGTCGGCCCTCATTGACGATATCTCCAGCG
TCCTCGCCATCCACCCCTGCGCGGCTGCCGCCCTTCTCCGCCACTACAAT
TGGAACAAAGAATCGGTCATCGACTCTTTCTGCACGGACCCAGACCAGGC
CAAGGAGAAGGCGGGGATCATGCGCTTTGTCCCGGACCTGCAGACCTCGG
ACAAGGGCCGGCTCTGCGGGATATGCCGGGAGGACGTGCCCGCCGAGGCC
CTGGTCGCTCTCGGCTGCGGCCACTTCTTCTGCCGGGGCTGTTTCACGCA
GTACCTGGTCAGCAAGGTGGAGGAGGGGATGGGCTGCCCGCTCACCCGCT
GTCCGGAGTATCGGTGTCCTGAAATGGTGACGGAGAATTTCTTTCGCGTC
CTAGTGCCTCCCGCCACCCTGGCGGCCTATTTGCGCTACAGCCTCAAGTC
CTTTGTCGACATCTGCAGCGCCTTCCGCTGGTGCCCAGGACGGGGCTGCG
ACTTCGTGGCCATGGGCAACAGCTCCCTCCGGGCCTGTCTGTGCAAGTGT
GGGATGCTCTTCTGCTTCCGCTGCGGCGAGGAGGCCCACGTGCCTGCGTC
CTGCGAGGACATGGTCACTTGGGTGGAGAAGTGTAAGAACGAGTCGGAGA
CGGCCAACTGGATCCTGGCAAATACCCGGAAGTGCCCAAAATGCGCCACG
CGCATTGAGAAGAACCAAGGCTGCAACCACATGACTTGTCGCCAGTGCAA
GTTCGAGTTCTGCTGGATCTGCATGGGCCCCTGGACCGAGCATGGCGCCA
ACACTGGGGGGTACTACAAGTGCAACAAGTACGACCCGTCGACGCCTACA
AAGGACGAGCAGGACGGGGCCAAGGCGAAGGCAGAGCTGGACCGCTACCT
GCACTACTACCAGCGGTACGACAATCACCACAAGGCGCAGGAGTACGCGA
CCAAGCAAGAGGAGGAGATTGAACGTCGGATGATGCGTCTCCAGGAAACG
GACGGCTCACGCTGGATCGACGTCCAGTTCTTGAAGGTGGCGAACGAGAA
GCTGGTGGAGTGCCGGCGAGTGTTGAAGTACACCTATGTCTTCGGGTACT
ACCTGCCGGAGGGGACGGCTCGGAAGCGGCTCTTTGAGCACCACCAGGAG
AACCTGGAGAAGTTCACGGAGCACCTGTCATGGCTGAGCGAACAGAGCTT
GGAGGAGTTCAAAAAGGAGGAGAAGCGGAGCGAGGTGGTGAACTACACCC
GTGTGACGGAGACCTTCCTGAAGAACCTGCTCAAGAGCGTGGAGGACGGG
CTCATGGACGAGGACGGTGAGGACATGGAGGAGGGTGGGTGGGAGGGAAA
AGCGGAGCCTGGGCGGCGGGCAGGGGCCGCCGGGGGGGGGCAAGTGGGGG
AAGCAGCAGAGGAGGGGCGTCCGACCCTGCCATCAAGAGACGGCGCGGGT
GGGGGGGGTCGGGCCCGTCGGAGCGGAGTGGCGAGGGCATGAATGTCTGG
TATGGAGAGCAGCGACGGCGAGGAGTACACTTACCAGGACGAAAGCGGGG
AGGAGGTTGTGGGGGGCGTGGAGAGTCAGGAGGAGGAGGAGGAGTACAGC
TATTCAGACGGGGAGGGGGGGGGTGCTCCTGTGCCCCTCCCGCCGCCCTC
ATCCTCCATGGCGGACGGATGCAAGGTGATCGACGCGGACGAGCTGCGAG
CCACCATGTCGGCCCTCATTGACGATATCTCCAGCGTCCTCGCCATCCAC
CCCTGCGCGGCTGCCGCCCTTCTCCGCCACTACAATTGGAACAAAGAATC
GGTCATCGACTCTTTCTGCACGGACCCAGACCAGGCCAAGGAGAAGGCGG
GGATCATGCGCTTTGTCCCGGACCTGCAGACCTCGGACAAGGGCCGGCTC
TGCGGGATATGCCGGGAGGACGTGCCCGCCGAGGCCCTGGTCGCTCTCGG
CTGCGGCCACTTCTTCTGCCGGGGCTGTTTCACGCAGTACCTGGTCAGCA
AGGTGGAGGAGGGGATGGGCTGCCCGCTCACCCGCTGTCCGGAGTATCGG
TGTCCTGAAATGGTGACGGAGAATTTCTTTCGCGTCCTAGTGCCTCCCGC
CACCCTGGCGGCCTATTTGCGCTACAGCCTCAAGTCCTTTGTCGACATCT
GCAGCGCCTTCCGCTGGTGCCCAGGACGGGGCTGCGACTTCGTGGCCATG
GGCAACAGCTCCCTCCGGGCCTGTCTGTGCAAGTGTGGGATGCTCTTCTG
CTTCCGCTGCGGCGAGGAGGCCCACGTGCCTGCGTCCTGCGAGGACATGG
TCACTTGGGTGGAGAAGTGTAAGAACGAGTCGGAGACGGCCAACTGGATC
CTGGCAAATACCCGGAAGTGCCCAAAATGCGCCACGCGCATTGAGAAGAA
CCAAGGCTGCAACCACATGACTTGTCGCCAGTGCAAGTTCGAGTTCTGCT
GGATCTGCATGGGCCCCTGGACCGAGCATGGCGCCAACACTGGGGGGTAC
TACAAGTGCAACAAGTACGACCCGTCGACGCCTACAAAGGACGAGCAGGA
CGGGGCCAAGGCGAAGGCAGAG back to top
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