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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100011g67.3496.mrna |
| Orig protein id | gnl|cribi|Naga_100011g67.3496 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037248.1 | supercontig | KK037248.1:202856..204647 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8257 ID=rna8257|Name=rna8257|organism=Nannochloropsis gaditana|type=mRNA|length=2929bp
TTCCCCTCAAGGAGCCTCCTCTTCGAGCGTAGAGACGTGGGGTTGTGTGA
CGTGCTGATATCGAATCGCACCACACTGGTAAAGTCCTCCCTTCTTCTTA
TTTTGTGCCTGTCCTATCTTTCTATGTCCTACCCTTCGCTGTCTACAGGG
AAAATGATAGCTTTGCAGTAGCCTTCTATCGCGCCTTCCATCATGAAGAG
GGGCCGCCTCGTAATAGTGGAAGACGAGGATAACACTCATCTGAGCTCGA
CGTCAGCTCATTCTTCTGCACGGCTGGTCAAGGTTGATGCCGAGACAGGA
CACGTGGAGATTTTTCCGGCTCGAAAATCATTGGCAACGCGGCATGTGGC
TCCTGAGTCCGCACATGAAGATGCTTTCCATTCCGATCCCCCCGGTATCG
GAGAGGTCCCTGCCACAGTGGAGGAGTCGAACGCCATTTTGTTTCCTGTT
GTTGGAAAGCCGTCATTATGCTTTTCCATTATTCCAATGCTATTCCTCTT
CGCCGTCCTCCTCTTTGCCTTCAGACTTTGCCGGGCACGGGAGCGATTGA
GAAGGACTGGAAGTGGGGCGGGCCACACGTGTGTCTCCCGACAAATATTG
GCCGCTGTCCTCACGCCCCTCACCTTCACCAATAAAATCGTAAAGTGGTG
CCTGGAAGGCCATGCGGCGGGTCTCGATCGGGAGGGAGACGTCAGGGAGC
AGGCCGAGCGCGCGCGGAGAGCCCTGGACAGGGCTCTGGCCCGAGACGAG
GCCCTGGGAGCCCGCGACGCCTTGCGCAGGCTGTCGCAGCTCGCCGAGAG
TCCGGACTTCCCGCTTTGGATGCGAGAGATCGCGGACCCACTGGAGGAGG
AGGCTTGGGAGGTGGAGGAAAGAGAGGAGTACCAGGACGAGCTGGTTCGG
GGGCTGACCGCGGCCATGGCGCGGTGCGAGGAGGCCCTAGGCGCGACCCG
GCAGCGACTCAGCCACCAGGCTCATTCGTGCTCCCTAGGTCTTGGCGTGC
AGAGGGGCATGAGCCCCACGTCCCTCGTTCTGTCCCTTCCGTCCGCTGCC
GGCGACCAGGAGATGCGCTTGGTGGGGTCGCTTGAGAAAGTCGGAGAGTA
CTGTAGAGGAACGGGGGAGGCTGCGAGTCGACAGGCGCGTGCTCTTGTGG
AAGAAGGTGAGAGCCTTCTGAAGCGCTGGTTCGAAGCGCAGGACAGCCCC
ATCTTGGGCGCCCTCTCTCAGGACGAGGTCTCTGCCCCGTTCCTAACCTT
GGGGCCCGGCTCCGTGTCCTGGAAGCCCACACCCTTCCGAGACGTGGAGC
TCATCAGGGATAGAGTGGGGGGGGAGGAGGTCAAGGAGATAGTCAAATCG
GGAGACCAGGGGGAAAAGGGGGCGTCCGAGCGGGCTATTCTCTCGAGGAG
GGAGGAAGCCGCGGGCGACCCCTCGGAGGAGACCGACACCAGGACGGCGA
CAGGAGGAAGGGCGGAGACGGAGGTCGTGTGGGCCCAGGAGGAGGCTGAG
GAGGATAGACAGGGGGCCACACGAGACTCGAAAGTAAAGCAGAAGGGAGA
CGGTGGCGGCGTGGGAGGCGAAGAGGTTGGGAATGGCTCTCTGCTTAGCC
ATACCTTACTGACCGGCGTCCGGGAAGGGACAGAGCGAGGGATGGTTGTG
ATGGGCGGGGGTTCGGGTCTTTTGAGCGTACATCGCGAAGCTGTAGAAAT
GGACGGCCCAGTGTCCTTGCTCGGGGCCTTCAAGGAGGAGCTGCGCCGAC
ACGCGGGGGCGGTGCGTATGGTGGAGTTGCAGCGAACATTGGAAGGCCGG
GGGCACGAGAGGCGGCAACGTCGAGAAGAGAGCAGGCGCGCCGCGGAGGC
AGAGCGGCTGCGGCGCCTCGAGGGGCTCCGCGAGAGAGGAAAGGACTTGA
TGGCGGTGCGGGCGTGCCGGGCAGCGGGGCGCCTGGAGGCTCAGGAGGCG
CGCCGGGCGGGGGACCAGGCCCTGTTCACTTACTTGCTGCCCGTCAGCCT
GGTCGCCTTCGGTCTTCTTGTCTGGGTGGCGTCGCTGGAAGAGGAAATGG
AGGGCAGGCGCGGCCCCTCCCTCCTCCTAGGCGCTCTGTGGCGCGTGCCC
ATCCACGATCTCCTGTATGGAGACTGTCTGGGCCCATCGCCCACGCCCTC
CTCGACCGTCTCCAGGGTGGTGCAGCACCACGTCAAGCGCTTCCCCGGCG
CAGACCGGCCGACCCTCCCCCGGGCCTCCACCCTTGGACTGGAAACCCTC
GCACGATGGCTCGATCTGGCTCTTCCTTCAAGCATCAGCACGGGCGTGGT
CGGAGCTTTAGAAGCGACTGGGTGCTATGCGAGGCGCACTCTGTGGCTGG
CTACCAACGCAGGAATGCTTGTCTTGCTGCATTTCGTGGTCGGCAGCTTA
GGTCTGGGTCCGCACCGTGCCAAAATGCACGTGGCTATTCTATTGTTCTG
CTTAAAAAACGCCTTCGCCCGCGTCACTTGGCGCGGTCTCTCATCCGTTC
GAAGTATTTTGGGGTTTCATTTCGTCCTCTTCGCTTTGACGGCTTGGAAG
GGCTTCGGTCGTTCATTTGCCCATCGCCATTTCCTCTTTCGCCGCTTAAT
TCCACTCCTGGCTGTGATGGTTGGGTTGTTGGATGGAGCCATATACGTGG
GCCCAGCAGCAGTATCTGGAAGTCTACAAGCATTAAGGGCCCTGTAAAGC
TTCTGTAACCTGAGCGATTAAATCAAAAGTGTGAATAAGAAAGTAGGCCC
GTGCAGGCATAAGAGTATGAGGATGTACACAAAACTTCACAAAGAGAGCA
ATTTCGACCATCTACAGTGTATATGTAACTTTATAGTCTAACGTAAGGTC
AGTTGCATGCTTCTCTCTACGCTAGCGTTTAAGATTTTTTTGAAAACCAC
GATAGCTCGCACTGTGACTACGCATCCCA back to topprotein sequence of rna8257 >rna8257-protein ID=rna8257-protein|Name=rna8257|organism=Nannochloropsis gaditana|type=polypeptide|length=374bp
MMTGKRFDRSATDILLNGGLQERGSEVRMLPSWEGASKVRSDPALLPLNM
VRIGTEEYQLFAPKRDESRSVTPRQAPYPVKERLPRWLPPRLKWPLENAL
GRFLGERPRQPPWLLQVDVSWPSGHRWNKGAALMVLCPLLAWSSGMSLAT
VMAGTGTGFLHGIFLRIRTEKCFDWNVCKGGLMASSAALYLALAVSGTPP
ALRGWTARALLWKPLSGCLGLAEWFLVMWVSLLLPFFKDPKASYYSSDTV
TVGMLLLTLLYASNFMVPLGLWAGTLLKVTPPPPPPPPPASAVTGALRLG
GTPHVSTGRPHQGPAQSLLPEKAGSFLTTASPTVAAAPAMAAGELQHPQH
SHFTLLEAPQEAWHGCEPPPPLGA back to topmRNA from alignment at KK037248.1:202856..204647+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8257 ID=rna8257|Name=rna8257|organism=Nannochloropsis gaditana|type=mRNA|length=1792bp|location=Sequence derived from alignment at KK037248.1:202856..204647+ (Nannochloropsis gaditana)
TTAAAATTCACTACCTGTATGCCACTTTCCTCACTCTTTCCGATAGGACA
TGCATCGAGGATTGGTCCCAGGGAACGTCTGAGGAGCAAGCCAAAAGCTG
AAATCTGAGGACACTTCTCTGCCATGATGACAGGCAAGCGATTCGATCGC
TCAGCCACGGATATCCTTCTCAATGGGGGGTTGCAGGAAAGAGGCTCCGA
GGTGCGCATGCTCCCCTCATGGGAAGGCGCTTCCAAAGTCCGTTCAGATC
CAGCCTTGCTTCCATTGAATATGGTGCGGATCGGCACAGAAGAGTATCAA
CTATTTGCCCCTAAGAGGGATGAAAGCAGATCTGTCACCCCCCGCCAAGC
ACCTTACCCAGTGAAGGAGCGACTGCCTCGCTGGTTACCACCTCGGTTGA
AATGGCCTCTGGAAAATGCACTGGGCCGCTTCCTGGGCGAAAGACCGCGG
CAGCCACCTTGGTTGTTGCAAGTGGATGTGTCATGGCCCAGCGGCCACCG
CTGGAACAAGGGCGCGGCCTTAATGGTTCTATGCCCCCTCTTGGCCTGGT
CCTCTGGCATGAGCCTGGCCACGGtgatggcggggacgggaacGGGCTTC
CTGCACGGCATTTTCCTGCGCATCCGGACGGAAAAGTGTTTCGACTGGAA
TGTATGCAAAGGCGGGCTCATGGCCTCAAGTGCTGCACTGTACTTGGCGC
TCGCCGTCTCAGGCACGCCGCCGGCCTTGCGGGGGTGGACCGCGAGGGCC
TTACTCTGGAAGCCTTTGAGCGGCTGCTTGGGCCTGGCCGAATGGTTCCT
GGTCATGTGGGTGTCCTTGCTGCTTCCGTTCTTCAAAGACCCGAAGGCCT
CTTACTACTCGAGCGATACCGTGACCGTgggcatgctcctcctcaccctt
ctcTACGCTAGCAACTTCATGGTGCCACTGGGCCTCTGGGCGGGCACCTT
GCTCAAGGTaacccccccacctccccctccccctccgcccgcgtCGGCCG
TCACAGGAGCATTAAGACTCGGCGGGACGCCGCACGTGAGCACAGGTAGA
CCGCACCAGGGGCCAGCTCAGTCGCTCCTCCCCGAGAAAGCCGGCTCCTT
CCTTACTACTGCCTCGCCTACGGTCGCTGCTGCGCCTGCAATGGCGGCTG
GAGAGCTGCAGCACCCGCAACATTCTCATTTTACGCTGCTTGAGGCACCA
CAAGAGGCTTGGCATGGATgcgagccccccccccctctcgggGCGTGAGA
GACTCCTCGCGAAAGCGGCGCTCTTGAAGCGGGAGCAGGGCATGCCCGGC
GATCCGCGCCGATGGTTGAGCCCTACCCAGGAAGATGAGCAGGAGCCGGG
CTTTGACGACGGTCTATCTCGGGCTAGGCCGAGAATCAATGCGCagcggg
ggccgggggctgGAAACGAGGAGTTGACGTGGTCGAGGCATAGGGGGAGT
CGGTCGtcccgaggagggagcaggagccaaTGGGGAGACCGCATAAGGGA
GGAACAGCCTCAGAGCGGGGCATCTCGGTACGGGCTACGCTcgcgaagag
ggaggacggtggggtgggaggacggCAAAGGGGAACTGGAGCCTGCACCT
ATGGAGCTCTcggcgtcgccccccccacccgtgCCCATGGACACGGAGGA
TAACGTGGATGGCGTTTCCAGGGGCTCGATGCGGGGACTGGGGCGTTTCG
AGTCGTTGAACCCTCATCAGTACTGATCGCTAAGTGGATCATATCAGAAA
AGCATACGCGAACAAAGAAACGATTCGAAAGACATAAGCTGA back to topCoding sequence (CDS) from alignment at KK037248.1:202856..204647+ >rna8257 ID=rna8257|Name=rna8257|organism=Nannochloropsis gaditana|type=CDS|length=1125bp|location=Sequence derived from alignment at KK037248.1:202856..204647+ (Nannochloropsis gaditana)
ATGATGACAGGCAAGCGATTCGATCGCTCAGCCACGGATATCCTTCTCAA
TGGGGGGTTGCAGGAAAGAGGCTCCGAGGTGCGCATGCTCCCCTCATGGG
AAGGCGCTTCCAAAGTCCGTTCAGATCCAGCCTTGCTTCCATTGAATATG
GTGCGGATCGGCACAGAAGAGTATCAACTATTTGCCCCTAAGAGGGATGA
AAGCAGATCTGTCACCCCCCGCCAAGCACCTTACCCAGTGAAGGAGCGAC
TGCCTCGCTGGTTACCACCTCGGTTGAAATGGCCTCTGGAAAATGCACTG
GGCCGCTTCCTGGGCGAAAGACCGCGGCAGCCACCTTGGTTGTTGCAAGT
GGATGTGTCATGGCCCAGCGGCCACCGCTGGAACAAGGGCGCGGCCTTAA
TGGTTCTATGCCCCCTCTTGGCCTGGTCCTCTGGCATGAGCCTGGCCACG
GtgatggcggggacgggaacGGGCTTCCTGCACGGCATTTTCCTGCGCAT
CCGGACGGAAAAGTGTTTCGACTGGAATGTATGCAAAGGCGGGCTCATGG
CCTCAAGTGCTGCACTGTACTTGGCGCTCGCCGTCTCAGGCACGCCGCCG
GCCTTGCGGGGGTGGACCGCGAGGGCCTTACTCTGGAAGCCTTTGAGCGG
CTGCTTGGGCCTGGCCGAATGGTTCCTGGTCATGTGGGTGTCCTTGCTGC
TTCCGTTCTTCAAAGACCCGAAGGCCTCTTACTACTCGAGCGATACCGTG
ACCGTgggcatgctcctcctcacccttctcTACGCTAGCAACTTCATGGT
GCCACTGGGCCTCTGGGCGGGCACCTTGCTCAAGGTaacccccccacctc
cccctccccctccgcccgcgtCGGCCGTCACAGGAGCATTAAGACTCGGC
GGGACGCCGCACGTGAGCACAGGTAGACCGCACCAGGGGCCAGCTCAGTC
GCTCCTCCCCGAGAAAGCCGGCTCCTTCCTTACTACTGCCTCGCCTACGG
TCGCTGCTGCGCCTGCAATGGCGGCTGGAGAGCTGCAGCACCCGCAACAT
TCTCATTTTACGCTGCTTGAGGCACCACAAGAGGCTTGGCATGGATgcga
gccccccccccctctcgggGCGTGA back to top
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