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Properties
| Property Name | Value |
|---|
| Product | 7-dehydrocholesterol reductase |
| Orig transcript id | gnl|cribi|Naga_100023g24.3942.mrna |
| Orig protein id | gnl|cribi|Naga_100023g24.3942 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037247.1 | supercontig | KK037247.1:407936..410009 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna8036 ID=rna8036|Name=rna8036|organism=Nannochloropsis gaditana|type=mRNA|length=3708bp
ATGGAGAGAATTAAGAAGCTATTCGAGAGGAAAGAAGCACCCACGAGCCG
AGTTTTTCATGTAGCTTCGGCCGAGGCGGGCCACACGGGGCACGAACATG
ACGGACATGCGTACTGCAACAATAGCGTTTCTACGTCCAAATATACCGTG
CTTTCATTCTTCCCCAAAAGCCTCTTCGAGCAGTTTCGCCGGCTCGCCAA
TGTCTATTTCCTAGTCATCATCATATTGCTGATGTTGGGGACTTACACGC
CGCTTTTTGACGCGCCCCTCACGCCCTACACCACTCTTTTTCCCCTTCTG
GTGGTGCTGGCTGTGACCATGGGCAAAGAAGGTTTCGAGGACGTGAAGCG
ACACATAGCCGACCGAGAGACCAATACCGCCCCGGTAGAGATGCTGAGCT
TAGAGAAACCTGGAGAGTTTGATTCGATGCAGCGGCAGGAGATACGGGTG
GGCCGCGTGGTGCGGGTATTGGACAAACAGATGGTGCCGGCAGACATGAT
CCTCCTCACTTCCTCGGAGGCGGAAGGCAGCTGCTACGTAGAGACCAGCA
ACATCGACGGTGAGACGAATCTAAAGATCAGGCAAGCGGCCAAGACCGCG
GCGGACGGCGTCGGATCCATGTGGCAGGATGACCCCGCCGATCTTCACGG
CTGGCAAGGAACAGTTGAGTGCGAATTGCCCAACTCCCACATTCATAGCT
TCAGCGGGGTTCTGCGTCACGAGAAGGAGGGAAATCGAGAGACTCCGGTG
GACGAGAGCAACCTGTTGCTGCGCGGCTCCTCGGTGCGCAATACGAAATG
GGTCCTAGGGCTAGTGGTTTACACGGGCAGGGACACAAAAATAGTTCAAA
ACTCGCGAGAGGCACCCAGCAAACTCTCCACCGTGGAGCATACGGTCAAT
AACATGCTCTACCTGATCTTGACGGCCCAGGTGGTGCTCGCCACTGCCTC
CGTCGTGTGCTTTGTCGTCTGGAACAAGGTCCGGCGTTTCAAGCTAGACT
ACATTTGTATCGAGGCGGCTAGCAGCGAGAATGCATTTTACGCCGAGAAT
TGCGGGACAGCGATCGAGCCGTCCAATTTGGGCATGTGGTTTACGTTTTT
TACACTATTTAATAACTTCGTGCCCATTTCACTTTACGTGACAATGGAGA
TGGTGAACTACTGCCAAGCCTTTTTCATAGACAACGACATCAAAATGTAC
GACTCCGAGGCAGATATGCCGGCGATGGCACGCACCTCCAACATGAACGG
GGACCTGGCCTCGATCCAGTACGTCTTCTCGGATAAGACGGGCACGCTCA
CTCGCAATGTCATGGAGTTTCGGCGCTGCTCCGTTGCCGGCACGGTATTC
GGGAATATGGAGGTGAGCGAGAACGCCCCACCCGACAAATCTGTGGTTGA
AGGCCAGCCCCTCTCCGACCTTGCCAAGCAGGCCATCTCGCAGGGTTCAG
GCTCAGCAGCATACTCCTTCATGCTTGTGCTGGCTGTGTGCCACACCGTC
GTCATGGAATCGCTGGACGACGGGGGCACGGCCTACCAGGCTGAGTCCCC
CGACGAGGAGGCTCTAGTCTCGGCAGCGGCCGATCTGGGCTTCCGCTTCA
CAGGCCGCGGGCCCGGGGAAGTGCGACTGAAGGTTGGTGGTGACGACAAG
GCAGGCGGCGAGGAGTTGACCTTCCAGTTGCTCTGCACGATCGCGTTCAC
GAGCACTCGAAAGCGCATGTCTGTGATAGTGAAGACTCCTGATGGCAAAG
TTCTCCTTCTGACTAAAGGTGCCGATAACATCGTGGGAGGACGGGCCAAA
GAATTTCACAGCACGGACAGCGATGCCGTCGATGCTCACCTGCGTCTCTT
CTCCGAGGACGGTCTGCGCACTCTCATGCTGGCAGTCCGCGAGCTGCCGG
AGAGCGAGTTCGACGCTTGGTTCCAGGGCTACCAGAAAGCGGCAGCATCC
ATTCAGAACCGTACCGAGGCCATCGGTGCGGTGGCCGATGAAATTGAGCG
AGACCTGGTTGTAGTTGGCACAACGGCCATTGAGGACAAGCTTCAAGAAG
GCGTGCCAGACACGATCGCGGACCTCTTAGATGGAGGAATTAAAGTTTGG
GTCCTGACAGGCGATAAGATGGAGACCGCTATCAACATCGGTTACTCTTG
CCGGCTGTTGAGCTCGCGAATGACACTCCTGAAACTGAAAGATACCGGCG
ACCCGGCCACCATCCGTCGGCACCTGAAGAAGCTTCTGAATGCGTTGGAC
TGGCTGGTGGAGCGAGAGCGGAAACTCGGCGACACGCTTGGCCGGCGCAT
CATGGAGCGAATGACACAATGCGCGCGGCGGGGCCCCGGGGACTTTCGCT
CCTCATGGCAAGCCGGCGAGGAGGATGTAAAGATCCTGGAGGATGAGGAC
CTAAAGGTGTGCTTTCGGCCTCAGAATGAGGCACCGCACTTCAAGGAGCT
GACGAGTGACACTGTCGCACTGGTGGTGGACGGCCCGGCGCTGGCCCACG
TGCTCGGTGACCCAGAGTACGAGGCCATGTTCCTGCGTCTTAGCAGCATC
TGTCGTTCAGTCGTTGCCTGCCGCGTCAGCCCGGCGCAGAAACGCTTGGT
GGTCCGTCTGGTCAAGGCGGGCGTCAAACCCATGCCCATCACCCTCTCCA
TCGGCGACGGTGCCAACGACGTGGCCATGATCCAGGAAGCACAAATTGGG
GTGGGAATCAGCGGGAAGGAAGGGCAGCAAGCAGTGAACAGCGCTGACTT
TGCTATTGCGCAGTTTCGGTATTTGAGGAGGCTGCTCTTAATCCACGGGC
GGTACGACTATCGGCGCATGTCCAAGGTCATCCTCTACTCCTTCTACAAG
AACATGGTCCTCACCTTCATCCTTTTCTACTACCTCTTCTTCACGGGGTT
TTCTGGGCAGTCCTTGTTCAACGACCTTGTCTACAGTGCCTTTAACTTTC
TATGTGCTATGCCGATCATCTGTGTCGGCTTCTTTGACATCGACATCTTC
CCCCAGCACGTGCTCGCCTGGAAGTGGGTCTACATGTCTGGTCGCGACCA
CATGGACCTGAACATCCGCCTGATGGTCCAATGGTTCGTGCAGGCCCTGC
TCGATTCCGTTCTCATTTTCTGCTTTAGCCTCTTCGCCGCCAGGAGCGCC
CACGAGATATGGGGCTGGGACGGAGACGTGGCGGGGCTTTACCTCTTCGG
GACAACGGTCTACTCGGTCATGCTCTTGGCCGTGTCCTTGAAGGTCGCCA
CCATCACCTACACCTGGACTCGCGTCAGCTGGTTCTTCTTCATCGGGTCC
CTGCTCCTCTATCTCATATTCATCTTTTCGTACTCCGCCATGCCCGCCTC
CACAACCTTCTACAACGTGGCTGCACACATGATGCGCATGGCGCCCCACT
GGTTGCTTGTGCTCCTGGGGTCCGTAGTATCGGTGGCTTTGGACCACTTC
ATAATTTCAGTCAAGCTTGCCTTTTCACCTACACCAGTCGATGTTGCGGT
TGAGAAGTCACGAATTTTGGCAGGTTGTAGTAATACCCGTCTTTCTTCGG
CCCCATTCAGACACGCAACGGGACTATCCAAAAGGACCGCCGTATCTACT
AGAAATGTGCAGAACATCACCTTTGGAAGCGAAGAGGAGGAGATTGATCC
TTCAAAAACTCAGACAGGGGAATCAACTTCCAATGGATTCATAGCCAAAA
ACGTTTAA back to topprotein sequence of rna8036 >rna8036-protein ID=rna8036-protein|Name=rna8036|organism=Nannochloropsis gaditana|type=polypeptide|length=445bp
MWQNKNGKSSGLLPGRESLGPLFLMGTTPIFIFITWFTMQHLDGDFGRLI
ESFRAHGWGYLKIIVPSPFDPTAWKVILSYMAVELAFMRLLPGKTFKATV
TPAGNVPVYRANGMQAYAASLLLFFLLQRYGPAHGLHVSWVYHHMGELLS
AMNVFSLAFCLFLLVKGLTFPSSSDSGSSGNWVIDFYWGTELYPRVLGFD
LKMFTNCRFGMMFWALGILCYAQAQAEKDGFLSNAMLVSVLLQLIYITKF
FYWETGYLCSMDIQHDRAGYYICWGCLVWVPAVYTSPSYFLVNHGGRDIG
SLTALLLLSAGAACVGINYWADRQRQVFRASDGKCSIWGKPPVFITASYT
TEKGEKRSSILLASGWWGVARHFHYVPEIMGAFLWSCPAGFYGLRFFLAY
FYVIFLTPLLFDRAFRDDARCRDKYGKHWDKYCALVPYKMIPGIL back to topmRNA from alignment at KK037247.1:407936..410009+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna8036 ID=rna8036|Name=rna8036|organism=Nannochloropsis gaditana|type=mRNA|length=2074bp|location=Sequence derived from alignment at KK037247.1:407936..410009+ (Nannochloropsis gaditana)
CTCCAGGAGTCTCGCCTTGACGGTGTGGTCGGTCGCTGATCCGGATTAAA
TACAAGCGCGCTCAGGGCATGTGGCAGAACAAGAATGGCAAATCCTCGGG
CCTCCTGCCTGGTCGCGAGAGTTTGGGACCTCTCTTTCTCATGGGAACGA
CCCCTATTTTCATTTTCATCACGTGGTTCACCATGCAGCATCTGGACGGA
GATTTTGGCAGGCTGATCGAGAGTTTCCGAGCGGTGAGTCAGCCTCATTG
ATGCGGACAACAGGCCATTAACACGAGCGGGAATCATCGACCGTAGATGT
CTCACTCACGCCCTGACATCCCTAAGTACAGCATGGATGGGGCTACTTAA
AAATCATTGTGCCCTCGCCCTTTGATCCCACAGCCTGGAAGGTCATTCTC
TCCTACATGGCGGTGGAGTTGGCTTTCATGCGGTGAGTGCCTTGACAGCT
TCCGCCCCCGGCACAATTTTACTTTACCCGTCCAACTGGCGTCTTCCAGC
AAAACCATGCTTAtacggggaggatggggctCTTGTGGTGGGGATGTTTA
GGTCGACTTGTCTCTAACCCTCGTTGTTAATTCTCGCTACATCCGACTGC
TCTTCTGAACCTTGAGCTAACCGCACGTGTCGGCGATTCATGCTTTATCA
GCTCACAACCCTGAACGACTCAATTATGTGCTCTCATTCAGGCTCCTGCC
CGGCAAGACCTTCAAAGCGACCGTGACGCCCGCAGGGAACGTGCCGGTCT
ACCGTGCCAACGGTATGCAGGCGtacgccgcctccctccttctcttcttc
ctcctacAGCGGTACGgccccgcccacggcctGCATGTGTCCTGGGTCTA
CCACCACATGGGAGAGCTCTTGTCGGCCATGAACGTCTTTTCGCTGGcct
tctgtctcttcctcttggTCAAGggcctcaccttcccctcctcctcagac
TCGGGCTCCTCCGGCAACTGGGTGATCGACTTCTACTGGGGCACCGAGCT
CTACCCGCGCGTGCTGGGCTTCGACCTGAAAATGTTCACCAACTGCCGCT
TCGGGATGATGTTTTGGGCGCTCGGCATCCTCTGCTACGCCCAGGCCCAG
GCCGAGAAGGACGGTTTTCTCTCTAACGCCATGCTCGTCAGCGTGCTCCT
CCAGCTCATCTACATCACCAAGTTCTTCTACTGGGAGACGGGCTACCTCT
GCTCCATGGACATCCAGCACGACCGCGCGGGCTACTACATCTGCTGGGGC
TGCTTGGTCTGGGTGCCTGCCGTCTacacttccccctcctacTTCCTGGT
CAACCACGGCGGCCGCGACATCGGCAGCCTcactgccctccttctcctct
cggCCGGCGCTGCCTGCGTGGGGATCAACTACTGGGCTGACCGTCAGCGT
CAGGTCTTCCGCGCCTCGGACGGGAAGTGCAGCATCTGGGGCAAGCCTCC
TGTCTTCATCACCGCCTCCTACACGACCGAGAAGGGCGAGAAGCGCTCCT
CTATCCTTCTCGCGTCAGGCTGGTGGGGTGTAGCGCGCCACTTTCACTAC
GTCCCAGAGATTATGGGCGCTTTCTTATGGAGCTGCCCGGCAGGCTTCTA
CGGCCTTCGCTTCTTTTTGGCCTACTTCTACGTGATTTTCTtgacccccc
tcctctttgacCGGGCTTTCCGTGACGATGCCCGTTGCCGTGACAAGTAT
GGCAAGCATTGGGATAAATACTGCGCGCTTGTGCCTTACAAAATGATCCC
TGGAATATTGTAAGCCTGGACAACCGTCTCGGCAAAGCTTCCGACCCCGC
TCGCTTCGTGCCCTCAATACGTCTGAGCTTCATGGTACCGCATATCTTAG
CACATTGGATGCGAAAAATTTCCATGGAGGAAAACGATAAACGTCAAAGT
AATGCGGAACAATTCAGTGCTTTGTTAGCGCCTGCACAGGATGCAGTCCT
GGTAGACTCGCTTGTCTTGTCTAATTCGTCGGTGAAAGGACCGTTTCGCC
GGATAATTGCGGCAATGGTCTTCCTACATTAAAGCTCCTTTGAAGCCTTA
TGACGGCAAATATTCTTTTTTACT back to topCoding sequence (CDS) from alignment at KK037247.1:407936..410009+ >rna8036 ID=rna8036|Name=rna8036|organism=Nannochloropsis gaditana|type=CDS|length=4014bp|location=Sequence derived from alignment at KK037247.1:407936..410009+ (Nannochloropsis gaditana)
ATGTGGCAGAACAAGAATGGCAAATCCTCGGGCCTCCTGCCTGGTCGCGA
GAGTTTGGGACCTCTCTTTCTCATGGGAACGACCCCTATTTTCATTTTCA
TCACGTGGTTCACCATGCAGCATCTGGACGGAGATTTTGGCAGGCTGATC
GAGAGTTTCCGAGCGCATGGATGGGGCTACTTAAAAATCATTGTGCCCTC
GCCCTTTGATCCCACAGCCTGGAAGGTCATTCTCTCCTACATGGCGGTGG
AGTTGGCTTTCATGCGGCTCCTGCCCGGCAAGACCTTCAAAGCGACCGTG
ACGCCCGCAGGGAACGTGCCGGTCTACCGTGCCAACGGTATGCAGGCGta
cgccgcctccctccttctcttcttcctcctacAGCGGTACGgccccgccc
acggcctGCATGTGTCCTGGGTCTACCACCACATGGGAGAGCTCTTGTCG
GCCATGAACGTCTTTTCGCTGGccttctgtctcttcctcttggTCAAGgg
cctcaccttcccctcctcctcagacTCGGGCTCCTCCGGCAACTGGGTGA
TCGACTTCTACTGGGGCACCGAGCTCTACCCGCGCGTGCTGGGCTTCGAC
CTGAAAATGTTCACCAACTGCCGCTTCGGGATGATGTTTTGGGCGCTCGG
CATCCTCTGCTACGCCCAGGCCCAGGCCGAGAAGGACGGTTTTCTCTCTA
ACGCCATGCTCGTCAGCGTGCTCCTCCAGCTCATCTACATCACCAAGTTC
TTCTACTGGGAGACGGGCTACCTCTGCTCCATGGACATCCAGCACGACCG
CGCGGGCTACTACATCTGCTGGGGCTGCTTGGTCTGGGTGCCTGCCGTCT
acacttccccctcctacTTCCTGGTCAACCACGGCGGCCGCGACATCGGC
AGCCTcactgccctccttctcctctcggCCGGCGCTGCCTGCGTGGGGAT
CAACTACTGGGCTGACCGTCAGCGTCAGGTCTTCCGCGCCTCGGACGGGA
AGTGCAGCATCTGGGGCAAGCCTCCTGTCTTCATCACCGCCTCCTACACG
ACCGAGAAGGGCGAGAAGCGCTCCTCTATCCTTCTCGCGTCAGGCTGGTG
GGGTGTAGCGCGCCACTTTCACTACGTCCCAGAGATTATGGGCGCTTTCT
TATGGAGCTGCCCGGCAGGCTTCTACGGCCTTCGCTTCTTTTTGGCCTAC
TTCTACGTGATTTTCTtgacccccctcctctttgacCGGGCTTTCCGTGA
CGATGCCCGTTGCCGTGACAAGTATGGCAAGCATTGGGATAAATACTGCG
CGCTTGTGCCTTACAAAATGATCCCTGGAATATTGTAAATGTGGCAGAAC
AAGAATGGCAAATCCTCGGGCCTCCTGCCTGGTCGCGAGAGTTTGGGACC
TCTCTTTCTCATGGGAACGACCCCTATTTTCATTTTCATCACGTGGTTCA
CCATGCAGCATCTGGACGGAGATTTTGGCAGGCTGATCGAGAGTTTCCGA
GCGCATGGATGGGGCTACTTAAAAATCATTGTGCCCTCGCCCTTTGATCC
CACAGCCTGGAAGGTCATTCTCTCCTACATGGCGGTGGAGTTGGCTTTCA
TGCGGCTCCTGCCCGGCAAGACCTTCAAAGCGACCGTGACGCCCGCAGGG
AACGTGCCGGTCTACCGTGCCAACGGTATGCAGGCGtacgccgcctccct
ccttctcttcttcctcctacAGCGGTACGgccccgcccacggcctGCATG
TGTCCTGGGTCTACCACCACATGGGAGAGCTCTTGTCGGCCATGAACGTC
TTTTCGCTGGccttctgtctcttcctcttggTCAAGggcctcaccttccc
ctcctcctcagacTCGGGCTCCTCCGGCAACTGGGTGATCGACTTCTACT
GGGGCACCGAGCTCTACCCGCGCGTGCTGGGCTTCGACCTGAAAATGTTC
ACCAACTGCCGCTTCGGGATGATGTTTTGGGCGCTCGGCATCCTCTGCTA
CGCCCAGGCCCAGGCCGAGAAGGACGGTTTTCTCTCTAACGCCATGCTCG
TCAGCGTGCTCCTCCAGCTCATCTACATCACCAAGTTCTTCTACTGGGAG
ACGGGCTACCTCTGCTCCATGGACATCCAGCACGACCGCGCGGGCTACTA
CATCTGCTGGGGCTGCTTGGTCTGGGTGCCTGCCGTCTacacttccccct
cctacTTCCTGGTCAACCACGGCGGCCGCGACATCGGCAGCCTcactgcc
ctccttctcctctcggCCGGCGCTGCCTGCGTGGGGATCAACTACTGGGC
TGACCGTCAGCGTCAGGTCTTCCGCGCCTCGGACGGGAAGTGCAGCATCT
GGGGCAAGCCTCCTGTCTTCATCACCGCCTCCTACACGACCGAGAAGGGC
GAGAAGCGCTCCTCTATCCTTCTCGCGTCAGGCTGGTGGGGTGTAGCGCG
CCACTTTCACTACGTCCCAGAGATTATGGGCGCTTTCTTATGGAGCTGCC
CGGCAGGCTTCTACGGCCTTCGCTTCTTTTTGGCCTACTTCTACGTGATT
TTCTtgacccccctcctctttgacCGGGCTTTCCGTGACGATGCCCGTTG
CCGTGACAAGTATGGCAAGCATTGGGATAAATACTGCGCGCTTGTGCCTT
ACAAAATGATCCCTGGAATATTGTAAATGTGGCAGAACAAGAATGGCAAA
TCCTCGGGCCTCCTGCCTGGTCGCGAGAGTTTGGGACCTCTCTTTCTCAT
GGGAACGACCCCTATTTTCATTTTCATCACGTGGTTCACCATGCAGCATC
TGGACGGAGATTTTGGCAGGCTGATCGAGAGTTTCCGAGCGCATGGATGG
GGCTACTTAAAAATCATTGTGCCCTCGCCCTTTGATCCCACAGCCTGGAA
GGTCATTCTCTCCTACATGGCGGTGGAGTTGGCTTTCATGCGGCTCCTGC
CCGGCAAGACCTTCAAAGCGACCGTGACGCCCGCAGGGAACGTGCCGGTC
TACCGTGCCAACGGTATGCAGGCGtacgccgcctccctccttctcttctt
cctcctacAGCGGTACGgccccgcccacggcctGCATGTGTCCTGGGTCT
ACCACCACATGGGAGAGCTCTTGTCGGCCATGAACGTCTTTTCGCTGGcc
ttctgtctcttcctcttggTCAAGggcctcaccttcccctcctcctcaga
cTCGGGCTCCTCCGGCAACTGGGTGATCGACTTCTACTGGGGCACCGAGC
TCTACCCGCGCGTGCTGGGCTTCGACCTGAAAATGTTCACCAACTGCCGC
TTCGGGATGATGTTTTGGGCGCTCGGCATCCTCTGCTACGCCCAGGCCCA
GGCCGAGAAGGACGGTTTTCTCTCTAACGCCATGCTCGTCAGCGTGCTCC
TCCAGCTCATCTACATCACCAAGTTCTTCTACTGGGAGACGGGCTACCTC
TGCTCCATGGACATCCAGCACGACCGCGCGGGCTACTACATCTGCTGGGG
CTGCTTGGTCTGGGTGCCTGCCGTCTacacttccccctcctacTTCCTGG
TCAACCACGGCGGCCGCGACATCGGCAGCCTcactgccctccttctcctc
tcggCCGGCGCTGCCTGCGTGGGGATCAACTACTGGGCTGACCGTCAGCG
TCAGGTCTTCCGCGCCTCGGACGGGAAGTGCAGCATCTGGGGCAAGCCTC
CTGTCTTCATCACCGCCTCCTACACGACCGAGAAGGGCGAGAAGCGCTCC
TCTATCCTTCTCGCGTCAGGCTGGTGGGGTGTAGCGCGCCACTTTCACTA
CGTCCCAGAGATTATGGGCGCTTTCTTATGGAGCTGCCCGGCAGGCTTCT
ACGGCCTTCGCTTCTTTTTGGCCTACTTCTACGTGATTTTCTtgaccccc
ctcctctttgacCGGGCTTTCCGTGACGATGCCCGTTGCCGTGACAAGTA
TGGCAAGCATTGGGATAAATACTGCGCGCTTGTGCCTTACAAAATGATCC
CTGGAATATTGTAA back to top
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