EWM22838.1, cds7838 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22838.1 vs. NCBI_GenBank
Match: gi|585103476|gb|EWM22838.1| (hypothetical protein Naga_100295g2 [Nannochloropsis gaditana]) HSP 1 Score: 772.311 bits (1993), Expect = 0.000e+0 Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0 Query: 1 MTDTGIPENFMCRSLNTCNSVLSDFKGRDIQETQERNYGAMRYTMNAKGCRATRIAIAMAVLYLYSIVLLKGRRFMPSSSSPPTPTLGLSSRPRGSSASLRSSYSGSLRNSFHRNSRGTESLNHLIMVAGHAVTISESLEGAETDDAVWYLLPYQRDQDLPATFVSHIRTGVELAKRDPASLLIFSGGQTRAEAGPRSEGSSYYRVAEHFGWWDSASSPSDVKKRALTEDYALDSIENLLYSICRFKEYTDHYPTRISVVSFAFKQKRFRFHHRAALRFPDSRFAFVGVDPPIGGKFDHKKAEKGELNEAVKLFESDPYGCNSKKLQEKHAERNPFMRTMPYTFSCPEVAPLLEYCESTIYPDPLPWDSH 370 MTDTGIPENFMCRSLNTCNSVLSDFKGRDIQETQERNYGAMRYTMNAKGCRATRIAIAMAVLYLYSIVLLKGRRFMPSSSSPPTPTLGLSSRPRGSSASLRSSYSGSLRNSFHRNSRGTESLNHLIMVAGHAVTISESLEGAETDDAVWYLLPYQRDQDLPATFVSHIRTGVELAKRDPASLLIFSGGQTRAEAGPRSEGSSYYRVAEHFGWWDSASSPSDVKKRALTEDYALDSIENLLYSICRFKEYTDHYPTRISVVSFAFKQKRFRFHHRAALRFPDSRFAFVGVDPPIGGKFDHKKAEKGELNEAVKLFESDPYGCNSKKLQEKHAERNPFMRTMPYTFSCPEVAPLLEYCESTIYPDPLPWDSH Sbjct: 1 MTDTGIPENFMCRSLNTCNSVLSDFKGRDIQETQERNYGAMRYTMNAKGCRATRIAIAMAVLYLYSIVLLKGRRFMPSSSSPPTPTLGLSSRPRGSSASLRSSYSGSLRNSFHRNSRGTESLNHLIMVAGHAVTISESLEGAETDDAVWYLLPYQRDQDLPATFVSHIRTGVELAKRDPASLLIFSGGQTRAEAGPRSEGSSYYRVAEHFGWWDSASSPSDVKKRALTEDYALDSIENLLYSICRFKEYTDHYPTRISVVSFAFKQKRFRFHHRAALRFPDSRFAFVGVDPPIGGKFDHKKAEKGELNEAVKLFESDPYGCNSKKLQEKHAERNPFMRTMPYTFSCPEVAPLLEYCESTIYPDPLPWDSH 370
BLAST of EWM22838.1 vs. NCBI_GenBank
Match: gi|1210520395|dbj|GAX20826.1| (hypothetical protein FisN_7Hh140 [Fistulifera solaris]) HSP 1 Score: 290.041 bits (741), Expect = 8.216e-93 Identity = 140/255 (54.90%), Postives = 179/255 (70.20%), Query Frame = 0 Query: 115 NSRGTESL-NHLIMVAGHAVTISESLEGAETDDAVWYLLPYQRDQDLPATFVSHIRTGVELAKRDPASLLIFSGGQTRAEAGPRSEGSSYYRVAEHFGWWDSASSPSDVKKRALTEDYALDSIENLLYSICRFKEYTDHYPTRISVVSFAFKQKRFRFHHRAALRFPDSRFAFVGVDPPIGGKFDHKKAEKGELNEAVKLFESDPYGCNSKKLQEKHAERNPFMRTMPYTFSCPEVAPLLEYCESTIYP-DPLPW 367 N+ G S +LI+VAGH+VTIS LE A D+ W+LL YQR + LP V HIR G+ A++DP SLL+FSGG+TRA GP +EG+SYYRV + W SPS V+ R +TED+A DS ENL++SICRF+E T YP I+VVSF+FKQ RF+ H ALR+P +RF ++GVDPP F ++A KGEL +VK F+SDPYGC+SK LQEK +RNPF RT PYT SCPE++ LL +C S + P D +PW Sbjct: 71 NTNGVASAAKNLIIVAGHSVTISGHLEDANQDENDWFLLDYQRHRGLPEAIVGHIRAGIAAAQKDPTSLLVFSGGETRAATGPETEGASYYRVTDAMQLW---PSPSTVRARTITEDFATDSFENLMFSICRFREVTGSYPNTITVVSFSFKQTRFQTMHAKALRWPPNRFQYIGVDPPASTGFKLEEATKGELENSVKPFQSDPYGCHSKILQEKRKQRNPFSRTPPYTLSCPEMSDLLRFCGSDLIPLDKVPW 322
BLAST of EWM22838.1 vs. NCBI_GenBank
Match: gi|1210529665|dbj|GAX11759.1| (hypothetical protein FisN_7Lh140 [Fistulifera solaris]) HSP 1 Score: 282.337 bits (721), Expect = 6.446e-90 Identity = 136/248 (54.84%), Postives = 175/248 (70.56%), Query Frame = 0 Query: 121 SLNHLIMVAGHAVTISESLEGAETDDAVWYLLPYQRDQDLPATFVSHIRTGVELAKRDPASLLIFSGGQTRAEAGPRSEGSSYYRVAEHFGWWDSASSPSDVKKRALTEDYALDSIENLLYSICRFKEYTDHYPTRISVVSFAFKQKRFRFHHRAALRFPDSRFAFVGVDPPIGGKFDHKKAEKGELNEAVKLFESDPYGCNSKKLQEKHAERNPFMRTMPYTFSCPEVAPLLEYCESTIYP-DPLPW 367 S +LI+VAGH+VTIS LE A D+ W+LL YQR + LP V HIR G+ A++DP SLL+FSGG+TRA GP +EG+SYYRV + W S S+ V+ R +TED+A DS ENL++SICRF+E T YP I+VVSF+FKQ RF+ H ALR+P +RF ++GVDP F ++A KGEL +VK F+SDPYGC+SK LQEK +RNPF RT PYT SCPE++ LL +C S + P D +PW Sbjct: 78 SAKNLIIVAGHSVTISGHLEDANQDENDWFLLDYQRHRGLPEAIVGHIRAGIAAAQKDPTSLLVFSGGETRAATGPETEGASYYRVTDAMQLWPSQST---VRARTITEDFATDSFENLMFSICRFREVTGSYPDTITVVSFSFKQTRFQTMHAKALRWPPNRFQYIGVDPSASTGFVLEEAMKGELENSVKPFQSDPYGCHSKILQEKRKQRNPFSRTPPYTLSCPEMSDLLRFCGSDLIPLDKVPW 322
BLAST of EWM22838.1 vs. NCBI_GenBank
Match: gi|219115395|ref|XP_002178493.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410228|gb|EEC50158.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 265.774 bits (678), Expect = 2.479e-84 Identity = 128/245 (52.24%), Postives = 166/245 (67.76%), Query Frame = 0 Query: 124 HLIMVAGHAVTISESLEGAETDDAVWYLLPYQRDQDLPATFVSHIRTGVELAKRDPASLLIFSGGQTRAEAGPRSEGSSYYRVAEHFGWWDSASSPSDVKKRALTEDYALDSIENLLYSICRFKEYTDHYPTRISVVSFAFKQKRFRFHHRAALRFPDSRFAFVGVDPPIGGKFDHKKAEKGELNEAVKLFESDPYGCNSKKLQEKHAERNPFMRTMPYTFSCPEVAPLLEYCESTIYP-DPLPW 367 HLI+VAGH+V IS LE A D+ WYLLPYQ+++ LPA V HI TG+ A+ D SLLIFSGG+TRA GP +EG+SYYRVA+ W SS V+ R ++E++A DS ENL++SICRF+E T YP +++VVSF FK++RF H AL++P F+++GVDP F+ ++A GEL A K FE DPYGC+S+ LQEK RNPF RT PY SCP++ LL YC I P +PW Sbjct: 20 HLIIVAGHSVAISGHLEDAGRDETDWYLLPYQKNRGLPAAIVGHINTGLNAAEEDEQSLLIFSGGETRASTGPETEGASYYRVADAMNLWPENSS---VRARTISEEFATDSFENLMFSICRFQEITGSYPEKVTVVSFTFKKRRFEELHAQALQWPKQSFSYIGVDPEANTGFNLQEAVVGELENAAKPFEIDPYGCHSQVLQEKRRSRNPFKRTPPYELSCPDMKELLSYCGPAIIPKSKVPW 261
BLAST of EWM22838.1 vs. NCBI_GenBank
Match: gi|397565697|gb|EJK44735.1| (hypothetical protein THAOC_36702, partial [Thalassiosira oceanica]) HSP 1 Score: 262.307 bits (669), Expect = 6.519e-83 Identity = 130/266 (48.87%), Postives = 171/266 (64.29%), Query Frame = 0 Query: 115 NSRGTESLNHLIMVAGHAVTISESLEGAETDDAVWYLLPYQRDQDLPATFVSHIRTGVELAKRDPASLLIFSGGQTRAEAGPRSEGSSYYRVAEHFGWWD------------SASSPSDVKKRALTEDYALDSIENLLYSICRFKEYTDHYPTRISVVSFAFKQKRFRFHHRAALRFPDSRFAFVGVDPPIGGKFDHKKAEKGELNEAVKLFESDPYGCNSKKLQEKHAERNPFMRTMPYTFSCPEVAPLLEYC-ESTIYPDPLPW 367 ++R HLI+VAGH+V IS +E A TD++VW+LL YQ++ LP + + HI+ G++LA DP SLL+FSGGQTR + GP SEGSSYYRVA+ WD A+ S V+ R TE++ALDS +NLL+SICRF E T YP R+S++SF FKQ+RF H AL P+ F FVGVDPP FD K++ +GE ++ F DPYGC+S+ LQ K ERNPF RT PY +CPE+ LL++C I +PW Sbjct: 2 DNRSAAKATHLIIVAGHSVLISGDVENAATDESVWWLLDYQKNHGLPQSILGHIQAGIQLAMEDPDSLLVFSGGQTRGQTGPESEGSSYYRVADALHLWDGRKAFPPSSIRRQANQQSTVRARTTTEEFALDSFQNLLFSICRFHEVTGSYPDRVSMISFTFKQERFETLHAQALLLPE--FVFVGVDPPPSTGFDLKQSSEGERINSLLPFRIDPYGCHSEVLQRKRKERNPFSRTPPYELTCPEMKDLLKWCGPEIIEKSKVPW 265
BLAST of EWM22838.1 vs. NCBI_GenBank
Match: gi|298708060|emb|CBJ30413.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 260.766 bits (665), Expect = 1.020e-80 Identity = 140/320 (43.75%), Postives = 199/320 (62.19%), Query Frame = 0 Query: 50 CRATRIAIAMAVLYLYSIVLLKGRRFMPSSSSPPTPTLGLSSRPRGSSASLRSSYSGSLRNSFHRNSRGTESLNHLIMVAGHAVTISESLEGAETDDAVWYLLPYQRDQDLPATFVSHIRTGVELAKRDPASLLIFSGGQTRAEAGPRSEGSSYYRVAEHFGWWDSASSPSDVKKRALTEDYALDSIENLLYSICRFKEYTDHYPTRISVVSFAFKQKRFRFHHRAALRFPDSRFAFVGVDPPIGGKFDHKKAEKGELNEAVKLFESDPYGC--NSKKLQEKHAERNPFMRTMPYTFSCPEVAPLLEYCESTIYPDPLPW 367 CR T + +A + +VLL+ + S L L+ R R +A+ S+ R F +S+ ++ L HLIMV H VT++ESLEGA++ D W+LL YQ+ +D+P V HI+ G++ D +LL+FSGG+TR AGP+SEG SY+ VA+H+ WW D++ RA TED+A DS EN+L+SICRFKE T YPT+I+VV F FK+ RF H +LRFP F +VG+ P G+FDH A +GE A++ + SDPYGC +Q++HA R+PF RT PY+ CPE++ LL +CE+ ++ LPW Sbjct: 62 CRPTMPRLTLAAI----VVLLQAAAILGLLVS-----LALT-RDRCRTAAATESFHVGPRVVF-VDSQASKELTHLIMVPCHGVTVTESLEGADSRDGDWFLLDYQKGKDVPRALVGHIQGGLDALDADENALLLFSGGKTRGPAGPKSEGESYFFVADHYDWWGK----PDLRARASTEDFARDSFENVLFSICRFKEITGDYPTKITVVGFDFKEDRFEHLHMPSLRFPPEAFRYVGLHPE--GRFDHAAAAEGERTSALEPYRSDPYGCAVGGTLVQKRHA-RDPFHRTPPYSMVCPEMSELLGWCETELFTGDLPW 363
BLAST of EWM22838.1 vs. NCBI_GenBank
Match: gi|1072225494|gb|OEU10241.1| (hypothetical protein FRACYDRAFT_151991, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 254.603 bits (649), Expect = 4.417e-80 Identity = 120/245 (48.98%), Postives = 166/245 (67.76%), Query Frame = 0 Query: 124 HLIMVAGHAVTISESLEGAETDDAVWYLLPYQRDQDLPATFVSHIRTGVELAKRDPASLLIFSGGQTRAEAGPRSEGSSYYRVAEHFGWWDSASSPSDVKKRALTEDYALDSIENLLYSICRFKEYTDHYPTRISVVSFAFKQKRFRFHHRAALRFPDSRFAFVGVDPPIGGKFDHKKAEKGELNEAVKLFESDPYGCNSKKLQEKHAERNPFMRTMPYTFSCPEVAPLLEYC-ESTIYPDPLPW 367 +L+MVAGH+VT+S L+ A +D++ W+LL YQ+ Q LP +HI G+E A++DP SLL+FSGG+TRA +GP++E +YY VA+ W + S V+ R TE++A DS ENL++SICRF+E T YP +I+VVSF+FK++RF H ALR+P RFA++GVDPP FD +++ +GE A F DPYGC++ LQEK RNPF RT PY SCPE+ LL++C I +PW Sbjct: 1 NLVMVAGHSVTVSGHLQDAGSDESDWFLLGYQKGQGLPQAIHAHITAGIEEARKDPKSLLVFSGGETRAISGPQTEAQAYYHVADAMNLWLTNDG-SSVRARTTTEEFATDSFENLMFSICRFREITGEYPKKITVVSFSFKRRRFETLHAPALRWPADRFAYIGVDPPASTGFDLQRSTEGESKNAAAPFAQDPYGCHTAVLQEKRNSRNPFQRTPPYGLSCPEMKELLQFCGPEFISVQLIPW 244
BLAST of EWM22838.1 vs. NCBI_GenBank
Match: gi|224001096|ref|XP_002290220.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220973642|gb|EED91972.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 251.136 bits (640), Expect = 6.509e-79 Identity = 120/246 (48.78%), Postives = 165/246 (67.07%), Query Frame = 0 Query: 123 NHLIMVAGHAVTISESLEGAETDDAVWYLLPYQRDQDLPATFVSHIRTGVELAKRDPASLLIFSGGQTRAEAGPRSEGSSYYRVAEHFGWWDSASSPSDVKKRALTEDYALDSIENLLYSICRFKEYTDHYPTRISVVSFAFKQKRFRFHHRAALRFPDSRFAFVGVDPPIGGKFDHKKAEKGELNEAVKLFESDPYGCNSKKLQEKHAERNPFMRTMPYTFSCPEVAPLLEYCESTIYPDP-LPW 367 HLI+VAGH+V +S ++ A D++VW+LL YQR++ LP VSHI+ G++LA D SLL+FSGG+TRA GP +EG SY+R S S V+ R +TE+YA DS ENLL+SICRF + T YP +I++VSF+FKQ+RF H AL++P +RF +VGVDPP FD ++ +GE ++ F SDPYGC+++ LQ+K ERNPF RT PY +CPE+ LL +C + P +PW Sbjct: 1 THLIIVAGHSVLVSGDVDKAAFDESVWFLLDYQRNRGLPQAIVSHIQAGIQLALEDDKSLLVFSGGETRARTGPETEGGSYFRAGP------SIHKQSTVRARTITEEYATDSFENLLFSICRFHDVTGSYPEKITIVSFSFKQERFESLHAGALQWPIARFDYVGVDPPSSTGFDLNESSEGEKRNSLVPFTSDPYGCHTELLQQKRKERNPFARTPPYDLTCPEMKELLHWCGPELIPKASVPW 240
BLAST of EWM22838.1 vs. NCBI_GenBank
Match: gi|676389259|ref|XP_009037908.1| (hypothetical protein AURANDRAFT_13322, partial [Aureococcus anophagefferens] >gi|323451398|gb|EGB07275.1| hypothetical protein AURANDRAFT_13322, partial [Aureococcus anophagefferens]) HSP 1 Score: 238.81 bits (608), Expect = 4.722e-74 Identity = 126/246 (51.22%), Postives = 154/246 (62.60%), Query Frame = 0 Query: 122 LNHLIMVAGHAVTISESLEGAETDDAVWYLLPYQRDQDLPATFVSHIRTGVELAKRDPASLLIFSGGQTRAEAGPRSEGSSYYRVAEHFGWWDSASSPSDVKKRALTEDYALDSIENLLYSICRFKEYTDHYPTRISVVSFAFKQKRFRFHHRAALRFPDSRFAFVGVDPPIGGKFDHKKAEKGELNEAVKLFESDPYGCNSKKLQEKHAERNPFMRTMPYTFSCPEVAPLLEYCESTIYPDPLPW 367 L L++VAGHAVT++ESLEG E +DA WYLL YQR +DLP FV H R G ELA +LL+FSGGQTR +AGPRSE SY+ +AEHFGWW V RA TE+YA DS ENLL+SICRF+E YP + VVSF FK++RF H A+RFP F F V G +FD A + A FE DPYGC+ +L K R+PF R +PY CPE+ LL +C +Y + LPW Sbjct: 1 LRRLVVVAGHAVTMAESLEGVEENDASWYLLGYQRGRDLPREFVKHARRGAELAAGRDDALLVFSGGQTRRDAGPRSEAQSYWLLAEHFGWWGLPG----VAARATTEEYARDSYENLLFSICRFREVAGDYPEAVDVVSFDFKERRFVDLHAPAIRFPKDAFHFEAVPVDGGSRFDGAAAAE-GEAAAAAAFEEDPYGCDG-ELHAKRRSRDPFHRGVPYGTVCPELGGLLAHCGDRLYQEALPW 240
BLAST of EWM22838.1 vs. NCBI_GenBank
Match: gi|702382549|ref|XP_010063885.1| (PREDICTED: uncharacterized protein C57A10.07 [Eucalyptus grandis] >gi|629105699|gb|KCW71168.1| hypothetical protein EUGRSUZ_F04261 [Eucalyptus grandis]) HSP 1 Score: 233.032 bits (593), Expect = 2.125e-70 Identity = 118/249 (47.39%), Postives = 165/249 (66.27%), Query Frame = 0 Query: 121 SLNHLIMVAGHAVTISESLEGAETDDAVWYLLPYQRDQDLPATFVSHIRTGVELAKRDPASLLIFSGGQTRAEAGPRSEGSSYYRVAEHFGWWDSASSPSDVKKRALTEDYALDSIENLLYSICRFKEYTDHYPTRISVVSFAFKQKRFRFHHRAALRFPDSRFAFVGVDPPIGGKFDHKKAEKGELNEAVKLFESDPYGCNSKKLQEKHAERNPFMRTMPYTFSCPEVAPLLEYCESTIYPDPLPWDS 369 +L +L+MVAGH++ S+S E + +D+ W+L PYQ++ ATF++HI G+E+ +D +LL+FSGG+TR +AGPRSE SY+ VAE GW+ +V+ RALTE++A DS ENLL+S+CRF+E T YP+ I+VVS+ FK++RF HRAA+RFP+SRF +VG + +KA KGE + F++DPYGC L K R+PF RT+PY CPE+ L YC + YP LPW S Sbjct: 106 NLKNLVMVAGHSIYTSKSCEKVDKEDS-WFLEPYQKNPGQAATFLAHIEQGIEITAKDEMALLLFSGGETRKDAGPRSEAQSYWAVAESRGWFGKEE---NVRSRALTEEHARDSFENLLFSVCRFRELTGRYPSNITVVSYDFKEERFAHLHRAAVRFPESRFFYVGTPASSTAR---EKARKGE-ALVRQQFQADPYGCQG-SLHRKKLGRDPFHRTIPYPKGCPEMQDLFRYCGAAPYPGWLPWTS 345 The following BLAST results are available for this feature:
BLAST of EWM22838.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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