EWM22841.1, cds7826 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22841.1 vs. NCBI_GenBank
Match: gi|585103480|gb|EWM22841.1| (nudix hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 809.675 bits (2090), Expect = 0.000e+0 Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0 Query: 1 MLDRHKRLFAKDFLVRYPSVSSSPLATLCPVVPAPKETEEQSFEFPTPPQTASWINPAYMRLENSNMSLTSSSSCSTCSLPPASSTSALGAAPLRRRRRVNGVGAAAFLLGLLVGGAHAFVPAYHRKLAAAAPCAAANNKRRAGGMSGHQSVTMSAVARDSHTASVPAPPTPHTHAPHTPSPGSVAPPEQPIINQYPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTNQWALPGGSVEIGEEMLQAAAREVVEETTLDHTTLQFYPRCFMTTDAIYNDDMGAVKYHFVISHMVCWAAPEAAPVAADDAKDIRWMTLPQLRTLDPEAIFRGVVEVVETVERLVDVGCITKADLVRVPVAPDGSMLPSLPPTPPGMGLDDDAQGANDLIPRRM 395 MLDRHKRLFAKDFLVRYPSVSSSPLATLCPVVPAPKETEEQSFEFPTPPQTASWINPAYMRLENSNMSLTSSSSCSTCSLPPASSTSALGAAPLRRRRRVNGVGAAAFLLGLLVGGAHAFVPAYHRKLAAAAPCAAANNKRRAGGMSGHQSVTMSAVARDSHTASVPAPPTPHTHAPHTPSPGSVAPPEQPIINQYPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTNQWALPGGSVEIGEEMLQAAAREVVEETTLDHTTLQFYPRCFMTTDAIYNDDMGAVKYHFVISHMVCWAAPEAAPVAADDAKDIRWMTLPQLRTLDPEAIFRGVVEVVETVERLVDVGCITKADLVRVPVAPDGSMLPSLPPTPPGMGLDDDAQGANDLIPRRM Sbjct: 1 MLDRHKRLFAKDFLVRYPSVSSSPLATLCPVVPAPKETEEQSFEFPTPPQTASWINPAYMRLENSNMSLTSSSSCSTCSLPPASSTSALGAAPLRRRRRVNGVGAAAFLLGLLVGGAHAFVPAYHRKLAAAAPCAAANNKRRAGGMSGHQSVTMSAVARDSHTASVPAPPTPHTHAPHTPSPGSVAPPEQPIINQYPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTNQWALPGGSVEIGEEMLQAAAREVVEETTLDHTTLQFYPRCFMTTDAIYNDDMGAVKYHFVISHMVCWAAPEAAPVAADDAKDIRWMTLPQLRTLDPEAIFRGVVEVVETVERLVDVGCITKADLVRVPVAPDGSMLPSLPPTPPGMGLDDDAQGANDLIPRRM 395
BLAST of EWM22841.1 vs. NCBI_GenBank
Match: gi|585101312|gb|EWM21211.1| (nudix [Nannochloropsis gaditana]) HSP 1 Score: 135.191 bits (339), Expect = 3.089e-32 Identity = 78/173 (45.09%), Postives = 101/173 (58.38%), Query Frame = 0 Query: 194 NQYPVFPRAAVNIVV-VRARPLNMGREYLFVQRSKEPGTNQWALPGGSVEIGEEMLQAAAREVVEETTLDHTTLQFYPRCFMTTDAIYNDDMGA--VKYHFVISHMVCWAAPEAA--PVAADDAKDIRWMTLPQLRTLDPEAIFRG-VVEVVETVERLVDVGCIT-KADLVRV 359 N YP+ RAAV + + + Y V+RSKEPG +W+LPGGSVE+GEE L AAARE EET+L L+FYP TTDAIY + GA V +H+VI+H W A A DDA ++ + TL +L+ + E + G V +VV VERLV G I DLVR+ Sbjct: 232 NAYPLHARAAVAVTIATKPSAFEKTTRYCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGVLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIDFDLVRL 404
BLAST of EWM22841.1 vs. NCBI_GenBank
Match: gi|873218398|emb|CEM39482.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 126.716 bits (317), Expect = 5.755e-30 Identity = 65/167 (38.92%), Postives = 97/167 (58.08%), Query Frame = 0 Query: 196 YPVFPRAAVNIVVVRARPLNMGR--EYLFVQRSKEPGTNQWALPGGSVEIGEEMLQAAAREVVEETTLDHTTLQFYPRCFMTTDAIYNDDMGAVKYHFVISHMVCWAAPEAAPVAADDAKDIRWMTLPQLRTLDPEAIF-RGVVEVVETVERLVDVGCITKADLVRV 359 YP + RAAV++ V + + +GR EYL ++R KEP +W+LPGG +++GE L+AAARE+ EET L+ T ++ YP F ++DAI D KYH++IS WA+ +A P DDA + W T L L + V+ +E E+L GC+ ++ V V Sbjct: 57 YPSYARAAVSVAVCKETGV-VGRRPEYLLIRRGKEPSKGKWSLPGGKIDLGETTLEAAARELKEETALNSTDVKLYPDSFYSSDAICFDSRHRCKYHYLISTFYGWASRDAKPRPMDDALEAAWFTKAALDDLHKHGMVDEAVIHAIERGEKLRQSGCLDRSRAVAV 222
BLAST of EWM22841.1 vs. NCBI_GenBank
Match: gi|553181763|ref|XP_005853620.1| (hypothetical protein NGA_0502900, partial [Nannochloropsis gaditana CCMP526] >gi|422295440|gb|EKU22739.1| hypothetical protein NGA_0502900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 122.094 bits (305), Expect = 8.155e-29 Identity = 70/146 (47.95%), Postives = 90/146 (61.64%), Query Frame = 0 Query: 220 YLFVQRSKEPGTNQWALPGGSVEIGEEMLQAAAREVVEETTLDHTTLQFYPRCFMTTDAIYNDDMGA--VKYHFVISHMVCWAAPEAA--PVAADDAKDIRWMTLPQLRTLDPEAIFRG-VVEVVETVERLVDVGCIT-KADLVRV 359 Y V+RSKEPG +W+LPGGSVE+GEE L AAARE EET+L L+FYP TTDAIY + GA +H+VI+H W A A DDA ++ + TL +L+ + E + G V +VV VERLV G I + DLVR+ Sbjct: 89 YCVVKRSKEPGKGKWSLPGGSVELGEETLLAAAREAREETSLSKEDLRFYPHAVCTTDAIYRREDGARGFLFHYVITHQAAWITTGAMDRARAGDDAAELTFKTLEELKAMSLEGLLVGNVCDVVMRVERLVAKGVINIEFDLVRL 234
BLAST of EWM22841.1 vs. NCBI_GenBank
Match: gi|551669247|ref|XP_005837382.1| (hypothetical protein GUITHDRAFT_151143 [Guillardia theta CCMP2712] >gi|428181539|gb|EKX50402.1| hypothetical protein GUITHDRAFT_151143 [Guillardia theta CCMP2712]) HSP 1 Score: 117.087 bits (292), Expect = 5.407e-27 Identity = 63/153 (41.18%), Postives = 88/153 (57.52%), Query Frame = 0 Query: 200 PRAAVNIVVVRARPLNMGREYLFVQRSKEPGTNQWALPGGSVEIGEEMLQAAAREVVEETTLDHTTLQFYPRCFMTTDAIYNDDMGAVK-YHFVISHMVCWAAPEAAPVAADDAKDIRWMTLPQLRTLDPEAIFRGVVEVVETVERLVDVGCI 351 PR+AV + R P + E+L ++R K P +W+LPGGSVE+GE + AA RE+ EET L ++F+ FMT+DAI D V +H+VI+ + PEA VA DDA D+ W T ++R A+ GV+ VVE E L GC+ Sbjct: 81 PRSAVAVAGCRLLP-SGETEWLLIKRGKPPSYGEWSLPGGSVELGESTIAAARRELCEETRLSSNDVKFFEDSFMTSDAIVKDARSDVTLFHYVIAQLFAEIKPEAQVVAGDDALDVGWFTKEKIRESSFGAVSPGVLRVVERAEELRRAGCL 232
BLAST of EWM22841.1 vs. NCBI_GenBank
Match: gi|1072237566|gb|OEU22293.1| (hypothetical protein FRACYDRAFT_179351 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 107.457 bits (267), Expect = 3.265e-24 Identity = 60/166 (36.14%), Postives = 95/166 (57.23%), Query Frame = 0 Query: 198 VFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTNQWALPGGSVEIGEEMLQAAAREVVEETTLDHTTLQFYPRCFMTTDAIYNDDMGAVKY--HFVISHMVCWA---------APEAAPVAADDAKDIRWMTLPQLRTLD-PEAIFRGVVEVVETVERLVDVGCI 351 ++PRAAV V P YL V+R P N+W++PGG +E+GEE L AA RE+ EET + ++ F+TTD+I D+M + Y H+VI+H C+A +P P +DDA D +W++L ++++L+ E + +GV+EV+ E L +G + Sbjct: 2 IYPRAAVAATVQWTNPNTNLYHYLLVKRKNPPAQNKWSIPGGKIELGEETLTAAKREIEEETQIRDCL--WHSNSFLTTDSIVLDEMNSSSYAFHYVIAH--CFAKIPPTSENESPALTP--SDDALDAKWLSLEEIKSLECSEHLSKGVIEVITKAEALSTLGIL 161
BLAST of EWM22841.1 vs. NCBI_GenBank
Match: gi|224000990|ref|XP_002290167.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973589|gb|EED91919.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 98.2117 bits (243), Expect = 2.692e-20 Identity = 69/175 (39.43%), Postives = 94/175 (53.71%), Query Frame = 0 Query: 198 VFPRAAVNIVVVRARP-------LNMGR-EYLFVQRSKEPGTNQWALPGGSVEIGEEMLQAAAREVVEETTLDH------TTLQFYPRC-FMTTDAIYNDDMGAVKYHFVISHMVCWAAPEAAPV-----AADDAKDIRWMTLPQL-RTLDPEAIFRGVVEVVETVERLVDVGCI 351 V PRAAV+ VVVR P +N +YL VQR K P W+LPGG +E+GE L AA RE+ EET L L++YP F +D+I++ V +H+VIS C+A E P+ A+DDA D RW + ++ R D A+ +GV+ VVE E L G + Sbjct: 36 VVPRAAVS-VVVRCAPSPSSTSDINKTSPKYLLVQRGKAPNKGMWSLPGGKIEVGEGTLDAAKRELWEETGLSTGHEPKAGVLKWYPHGPFACSDSIHHTKDSGVSFHYVISQ--CFAVIE-VPIPPKVEASDDAMDARWWSSSEMRRGEDDGAVTKGVLRVVERSEVLYSSGLL 206
BLAST of EWM22841.1 vs. NCBI_GenBank
Match: gi|1084566429|gb|OGO23290.1| (hypothetical protein A2Z28_03315 [Chloroflexi bacterium RBG_16_51_9]) HSP 1 Score: 94.3597 bits (233), Expect = 1.134e-19 Identity = 53/143 (37.06%), Postives = 79/143 (55.24%), Query Frame = 0 Query: 196 YPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTNQWALPGGSVEIGEEMLQAAAREVVEETTLDHTTLQFYPRCFMTTDAIYNDDMGAVKYHFVISHMVC-WAAPEAAPVAADDAKDIRWMTLPQLRTLDPEAIFRGVVE 337 YP P AV+ ++ + + L ++RSKEP +W++PGG +E+GE + QA REV EE +++ R F TT+ I DD G VKYH+V+ M+ +A E A DA++ RW+T +L LD R V+E Sbjct: 12 YPAHPTVAVSAIIFKEERV------LMIKRSKEPNKGKWSIPGGGIELGETLDQAVKREVREECSIEIEV----ERVFYTTENIIRDDDGRVKYHYVLVDMLAKYAGGETK--AQSDAEECRWVTAEELSELDITPRLRAVLE 142
BLAST of EWM22841.1 vs. NCBI_GenBank
Match: gi|1134158175|ref|WP_076400903.1| (hypothetical protein [Insolitispirillum peregrinum]) HSP 1 Score: 92.8189 bits (229), Expect = 7.207e-19 Identity = 56/140 (40.00%), Postives = 77/140 (55.00%), Query Frame = 0 Query: 193 INQYPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTNQWALPGGSVEIGEEMLQAAAREVVEETTLD----HTTLQFYPRCFMTTDAIYNDDMGAVKYHFVISHMVC-WAAPEAAPVAADDAKDIRWMTLPQLRTLD 327 +++YP P+ AV VVVR L L VQR P W PGG + +GE + A RE+ EET ++ H TL P F + D I D +GAV+YHFV++ ++C W + + VA DDA D W TLP++ LD Sbjct: 3 VSRYPRGPQPAVLAVVVREERL------LLVQRKNPPDAGCWGFPGGRLMLGETLAAGAVRELREETAVEAVARHGTL---PAAFASLDVIERDIVGAVRYHFVLTAVLCQWQSGDG--VAGDDAADCAWRTLPEILALD 131
BLAST of EWM22841.1 vs. NCBI_GenBank
Match: gi|1131919837|emb|SIS83819.1| (ADP-ribose pyrophosphatase YjhB, NUDIX family [Insolitispirillum peregrinum]) HSP 1 Score: 93.5893 bits (231), Expect = 8.195e-19 Identity = 56/140 (40.00%), Postives = 77/140 (55.00%), Query Frame = 0 Query: 193 INQYPVFPRAAVNIVVVRARPLNMGREYLFVQRSKEPGTNQWALPGGSVEIGEEMLQAAAREVVEETTLD----HTTLQFYPRCFMTTDAIYNDDMGAVKYHFVISHMVC-WAAPEAAPVAADDAKDIRWMTLPQLRTLD 327 +++YP P+ AV VVVR L L VQR P W PGG + +GE + A RE+ EET ++ H TL P F + D I D +GAV+YHFV++ ++C W + + VA DDA D W TLP++ LD Sbjct: 37 VSRYPRGPQPAVLAVVVREERL------LLVQRKNPPDAGCWGFPGGRLMLGETLAAGAVRELREETAVEAVARHGTL---PAAFASLDVIERDIVGAVRYHFVLTAVLCQWQSGDG--VAGDDAADCAWRTLPEILALD 165 The following BLAST results are available for this feature:
BLAST of EWM22841.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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