EWM22850.1, cds7822 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|585103492|gb|EWM22850.1| (cell division cycle protein 27 [Nannochloropsis gaditana]) HSP 1 Score: 368.237 bits (944), Expect = 6.077e-129 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0 Query: 1 MSPFGNQTHPSISDWGLPNASKGQWDGKEGLSLPPEAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGRREGGRAGGDKDGVICLLLRHSGDDRRSAQS 180 MSPFGNQTHPSISDWGLPNASKGQWDGKEGLSLPPEAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGRREGGRAGGDKDGVICLLLRHSGDDRRSAQS Sbjct: 1 MSPFGNQTHPSISDWGLPNASKGQWDGKEGLSLPPEAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGRREGGRAGGDKDGVICLLLRHSGDDRRSAQS 180
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|953488090|emb|CEG48107.1| (DNA-binding cell division cycle control protein [Plasmopara halstedii]) HSP 1 Score: 82.8037 bits (203), Expect = 3.268e-15 Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = 0 Query: 36 EAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLG 123 E + + IQRYLD ++ A FLAERL A P E + LLATC+ R+G +L+G T A +RYL A C +L+R E E+ALLG Sbjct: 6 EVALIKQIQRYLDTFVYDNARFLAERLVAHNPNEENLLLLATCYFRKGQAAQAAAVLNGATSADNRYLLASCCFQLNRLIETESALLG 93
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|301117346|ref|XP_002906401.1| (anaphase-promoting complex subunit, putative [Phytophthora infestans T30-4] >gi|262107750|gb|EEY65802.1| anaphase-promoting complex subunit, putative [Phytophthora infestans T30-4]) HSP 1 Score: 78.1814 bits (191), Expect = 1.062e-13 Identity = 39/81 (48.15%), Postives = 53/81 (65.43%), Query Frame = 0 Query: 43 IQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLG 123 +QRYLDL ++ A FLAERL A P+E + LLA+C+ R+G V +L G T A++RYL A C + ++ EAE ALLG Sbjct: 9 VQRYLDLYVYDNARFLAERLVAHHPSEENALLLASCYYRKGQVDRAVEVLSGATRAENRYLLARCCFQQNKLVEAENALLG 89
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|570972863|gb|ETP35641.1| (hypothetical protein F442_16265 [Phytophthora parasitica P10297]) HSP 1 Score: 78.1814 bits (191), Expect = 1.455e-13 Identity = 47/122 (38.52%), Postives = 68/122 (55.74%), Query Frame = 0 Query: 36 EAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGR--REGGR 155 EA + +QRYL+L ++ A FLAERL A P+E + LLATC+ R+G +L+G A++RYL A C + ++ AEAE ALLG + P +++ G + GR R G R Sbjct: 6 EAALVGQVQRYLNLYVYDNARFLAERLVAHHPSEENALLLATCYYRKGQTARAAEVLNGAMRAENRYLLACCCFQQNQMAEAENALLGGEKCNIDDPDTMENVPAGAAGLYLLGRVCRRGNR 127
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|570318550|gb|ETO66498.1| (hypothetical protein F444_16390 [Phytophthora parasitica P1976]) HSP 1 Score: 77.7962 bits (190), Expect = 1.557e-13 Identity = 47/122 (38.52%), Postives = 68/122 (55.74%), Query Frame = 0 Query: 36 EAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGR--REGGR 155 EA + +QRYL+L ++ A FLAERL A P+E + LLATC+ R+G +L+G A++RYL A C + ++ AEAE ALLG + P +++ G + GR R G R Sbjct: 6 EAALVGQVQRYLNLYVYDNARFLAERLVAHHPSEENALLLATCYYRKGQTARAAEVLNGAMRAENRYLLACCCFQQNQMAEAENALLGGEKCNIDDPDTMENVPAGAAGLYLLGRVCRRGNR 127
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|568010434|gb|ETL84622.1| (hypothetical protein L917_15655 [Phytophthora parasitica]) HSP 1 Score: 77.7962 bits (190), Expect = 1.559e-13 Identity = 47/122 (38.52%), Postives = 68/122 (55.74%), Query Frame = 0 Query: 36 EAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGR--REGGR 155 EA + +QRYL+L ++ A FLAERL A P+E + LLATC+ R+G +L+G A++RYL A C + ++ AEAE ALLG + P +++ G + GR R G R Sbjct: 6 EAALVGQVQRYLNLYVYDNARFLAERLVAHHPSEENALLLATCYYRKGQTARAAEVLNGAMRAENRYLLACCCFQQNQMAEAENALLGGEKCNIDDPDTMENVPAGAAGLYLLGRVCRRGNR 127
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|675205345|ref|XP_008911557.1| (hypothetical protein PPTG_16038 [Phytophthora parasitica INRA-310] >gi|568088151|gb|ETN03013.1| hypothetical protein PPTG_16038 [Phytophthora parasitica INRA-310]) HSP 1 Score: 77.7962 bits (190), Expect = 1.945e-13 Identity = 47/122 (38.52%), Postives = 68/122 (55.74%), Query Frame = 0 Query: 36 EAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGR--REGGR 155 EA + +QRYL+L ++ A FLAERL A P+E + LLATC+ R+G +L+G A++RYL A C + ++ AEAE ALLG + P +++ G + GR R G R Sbjct: 6 EAALVGQVQRYLNLYVYDNARFLAERLVAHHPSEENALLLATCYYRKGQTARAAEVLNGALRAENRYLLACCCFQQNQMAEAENALLGGEKCNIDDPDTMENVPAGAAGLYLLGRVCRRGNR 127
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|566014793|gb|ETI37704.1| (hypothetical protein F443_16421 [Phytophthora parasitica P1569]) HSP 1 Score: 77.411 bits (189), Expect = 2.041e-13 Identity = 47/122 (38.52%), Postives = 67/122 (54.92%), Query Frame = 0 Query: 36 EAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGR--REGGR 155 EA + +QRYL+L ++ A FLAERL A P+E + LLATC+ R+G +L+G A++RYL A C + + AEAE ALLG + P +++ G + GR R G R Sbjct: 6 EAALVGQVQRYLNLYVYDNARFLAERLVAHHPSEENALLLATCYYRKGQTARAAEVLNGAMRAENRYLLACCCFQQNHMAEAENALLGGEKCNIDDPDTMENVPAGAAGLYLLGRVCRRGNR 127
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|570942355|gb|ETP07612.1| (hypothetical protein F441_16250 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 77.411 bits (189), Expect = 2.042e-13 Identity = 47/122 (38.52%), Postives = 67/122 (54.92%), Query Frame = 0 Query: 36 EAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGR--REGGR 155 EA + +QRYL+L ++ A FLAERL A P+E + LLATC+ R+G +L+G A++RYL A C + + AEAE ALLG + P +++ G + GR R G R Sbjct: 6 EAALVGQVQRYLNLYVYDNARFLAERLVAHHPSEENALLLATCYYRKGQTARAAEVLNGAMRAENRYLLACCCFQQNHMAEAENALLGGEKCNIDDPDTMENVPAGAAGLYLLGRVCRRGNR 127
BLAST of EWM22850.1 vs. NCBI_GenBank
Match: gi|970632820|gb|KUF78853.1| (Cell division cycle protein 27 B [Phytophthora nicotianae]) HSP 1 Score: 77.411 bits (189), Expect = 2.157e-13 Identity = 47/122 (38.52%), Postives = 67/122 (54.92%), Query Frame = 0 Query: 36 EAPVTEIIQRYLDLCLFPTATFLAERLCAQQPTEAHRHLLATCHARRGDWKGVVGILHGCTGAKSRYLYAYACLELDRPAEAEAALLGLQDVREKGPVLAQHLLMAQVGGWGEGR--REGGR 155 EA + +QRYL+L ++ A FLAERL A P+E + LLATC+ R+G +L+G A++RYL A C + + AEAE ALLG + P +++ G + GR R G R Sbjct: 6 EAALVGQVQRYLNLYVYDNARFLAERLVAHHPSEENALLLATCYYRKGQTARAAEVLNGAMRAENRYLLACCCFQQNHMAEAENALLGGEKCNIDDPDTMENVPAGAAGLYLLGRVCRRGNR 127 The following BLAST results are available for this feature:
BLAST of EWM22850.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|