EWM22856.1, cds7817 (CDS) Nannochloropsis gaditana

Overview
NameEWM22856.1
Unique Namecds7817
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002474.1:95424..95562 -
Alignment locationCM002474.1:95254..95335 -
Alignment locationCM002474.1:94673..94779 -
Alignment locationCM002474.1:94081..94206 -
Alignment locationCM002474.1:93753..93892 -
Alignment locationCM002474.1:93442..93561 -
Alignment locationCM002474.1:92855..93130 -
Alignment locationCM002474.1:92619..92738 -
Alignment locationCM002474.1:92393..92520 -
Alignment locationCM002474.1:92135..92242 -
Alignment locationCM002474.1:91926..92004 -
Alignment locationCM002474.1:91583..91639 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22856.1
Productcln3like protein
Orig transcript idgnl|cribi|Naga_100243g3.9379.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:95424..95562 -
CM002474.1supercontigCM002474.1:95254..95335 -
CM002474.1supercontigCM002474.1:94673..94779 -
CM002474.1supercontigCM002474.1:94081..94206 -
CM002474.1supercontigCM002474.1:93753..93892 -
CM002474.1supercontigCM002474.1:93442..93561 -
CM002474.1supercontigCM002474.1:92855..93130 -
CM002474.1supercontigCM002474.1:92619..92738 -
CM002474.1supercontigCM002474.1:92393..92520 -
CM002474.1supercontigCM002474.1:92135..92242 -
CM002474.1supercontigCM002474.1:91926..92004 -
CM002474.1supercontigCM002474.1:91583..91639 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
IPR003492Battenin_disease_Cln3
Homology
BLAST of EWM22856.1 vs. NCBI_GenBank
Match: gi|585103500|gb|EWM22856.1| (cln3like protein [Nannochloropsis gaditana])

HSP 1 Score: 1000.73 bits (2586), Expect = 0.000e+0
Identity = 493/493 (100.00%), Postives = 493/493 (100.00%), Query Frame = 0
Query:    1 MRTWLRGRMGRDGDKQAMEKRQNLAAFWALGLLNNVVYVIMLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYWFHHVSYSLRASLCGFLMAASLLTVALGRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNAISPLYSYPSTSLRNEAEGEEEEGRGGEREGEGRGRERKGGRVQKRARTRKGKRSHPHTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQGCLYRANRIPGATFTCGA 493
            MRTWLRGRMGRDGDKQAMEKRQNLAAFWALGLLNNVVYVIMLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYWFHHVSYSLRASLCGFLMAASLLTVALGRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNAISPLYSYPSTSLRNEAEGEEEEGRGGEREGEGRGRERKGGRVQKRARTRKGKRSHPHTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQGCLYRANRIPGATFTCGA
Sbjct:    1 MRTWLRGRMGRDGDKQAMEKRQNLAAFWALGLLNNVVYVIMLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYWFHHVSYSLRASLCGFLMAASLLTVALGRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNAISPLYSYPSTSLRNEAEGEEEEGRGGEREGEGRGRERKGGRVQKRARTRKGKRSHPHTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQGCLYRANRIPGATFTCGA 493          
BLAST of EWM22856.1 vs. NCBI_GenBank
Match: gi|585103501|gb|EWM22857.1| (cln3like protein [Nannochloropsis gaditana])

HSP 1 Score: 962.6 bits (2487), Expect = 0.000e+0
Identity = 475/475 (100.00%), Postives = 475/475 (100.00%), Query Frame = 0
Query:    1 MRTWLRGRMGRDGDKQAMEKRQNLAAFWALGLLNNVVYVIMLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYWFHHVSYSLRASLCGFLMAASLLTVALGRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNAISPLYSYPSTSLRNEAEGEEEEGRGGEREGEGRGRERKGGRVQKRARTRKGKRSHPHTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQ 475
            MRTWLRGRMGRDGDKQAMEKRQNLAAFWALGLLNNVVYVIMLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYWFHHVSYSLRASLCGFLMAASLLTVALGRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNAISPLYSYPSTSLRNEAEGEEEEGRGGEREGEGRGRERKGGRVQKRARTRKGKRSHPHTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQ
Sbjct:    1 MRTWLRGRMGRDGDKQAMEKRQNLAAFWALGLLNNVVYVIMLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYWFHHVSYSLRASLCGFLMAASLLTVALGRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNAISPLYSYPSTSLRNEAEGEEEEGRGGEREGEGRGRERKGGRVQKRARTRKGKRSHPHTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQ 475          
BLAST of EWM22856.1 vs. NCBI_GenBank
Match: gi|585103502|gb|EWM22858.1| (cln3like protein [Nannochloropsis gaditana])

HSP 1 Score: 849.351 bits (2193), Expect = 0.000e+0
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0
Query:   75 FHHVSYSLRASLCGFLMAASLLTVALGRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNAISPLYSYPSTSLRNEAEGEEEEGRGGEREGEGRGRERKGGRVQKRARTRKGKRSHPHTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQGCLYRANRIPGATFTCGA 493
            FHHVSYSLRASLCGFLMAASLLTVALGRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNAISPLYSYPSTSLRNEAEGEEEEGRGGEREGEGRGRERKGGRVQKRARTRKGKRSHPHTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQGCLYRANRIPGATFTCGA
Sbjct:    7 FHHVSYSLRASLCGFLMAASLLTVALGRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNAISPLYSYPSTSLRNEAEGEEEEGRGGEREGEGRGRERKGGRVQKRARTRKGKRSHPHTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQGCLYRANRIPGATFTCGA 425          
BLAST of EWM22856.1 vs. NCBI_GenBank
Match: gi|553186322|ref|XP_005854399.1| (battenin, partial [Nannochloropsis gaditana CCMP526] >gi|422294664|gb|EKU21964.1| battenin, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 568.926 bits (1465), Expect = 0.000e+0
Identity = 367/458 (80.13%), Postives = 374/458 (81.66%), Query Frame = 0
Query:   41 MLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYWFHHVSYSLRASLCGF-----------------LMAASLLTVA------LGRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNAISPLYSYPSTSLRNEAEGEEEEGRGGEREGEGRGRERKGGRVQKRARTRKGKRSHPHTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQ 475
            MLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYW+  +    R S                     L  A L TV            A    GVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGIL Y              P  + ++LL           +L      + QEVLADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNAISPLYSYPSTSLRNEAEGEEEEGRGGEREGEGRGRERKGGRVQKRARTRKGKRSHPHTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQ
Sbjct:    1 MLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYWYVAIQSKTRTSAPPPLSLPSSPNRTCLHSSRELAPAHLDTVIDVAFLFFPIYFASLTIGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILAY--------------PCQMSSSLLT----------SLFRNHVSSSQEVLADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNAISPLYSYPSTSLRNEAEGEEEEGRGGEREGEGRGRERKGGRVQKRARTRKGKRSHPHTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQ 434          
BLAST of EWM22856.1 vs. NCBI_GenBank
Match: gi|760447995|ref|XP_011401066.1| (Protein btn-1 [Auxenochlorella protothecoides] >gi|675355614|gb|KFM28054.1| Protein btn-1 [Auxenochlorella protothecoides])

HSP 1 Score: 346.665 bits (888), Expect = 3.237e-111
Identity = 211/481 (43.87%), Postives = 269/481 (55.93%), Query Frame = 0
Query:   22 QNLAAFWALGLLNNVVYVIMLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYWFHHVSYSLRASLCGFLMAASLLTVALGRTLAVQLTGVGFCSLQAGIGEASMLGLTAQY---HGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLAD--INDELSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTA------ASALLSPNAISPLYSYPSTSLRNEAEGEEEEGRGGEREGEGRGRERKGGRVQKRARTRKGKRSHPHTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQGCLYRANRIPGATFTC 491
            + L AF  LGL NN+ YVIMLAGA  I+A  VGLV+LA V P  +VK S PYWFH V Y  R +    LM+ S   VAL  +  +QL GV   S Q G+GEAS L L+A+Y    GP  IT WSSGTGFAG+ GYAWV   H+   +SF  TL+A  +L  AW+ TFF  L  P         +D   +D+ +++      +   V       G  LP  G  +A       S   +          P    R  A    +E R     G GRG E   G       +  G              R  L L LWP+TVPL TVY AEY+MQSGAW+AIGFPV +  AR  FY +AN  YQ GVF+SRSSG++  P +  LW +PALQ  LL FF  +A+ H+WY W LL  CF+ GL GGAVYV  F+L+SR      RE ++ +AS+AD++GI  ++VAG+L+QGCL++ NRIPGA +TC
Sbjct:   13 RTLIAFGLLGLFNNISYVIMLAGANSISAAAVGLVYLAAVGPAIIVKASGPYWFHAVGYPPRMAAAAALMSGSFCLVALSASRPLQLLGVALASFQGGLGEASCLALSARYGSDRGP--ITLWSSGTGFAGVAGYAWVAALHVWAGLSFRTTLLAGNVLAGAWLATFFLLLRPPPPRPVPLPTSDGEEDDDTAASAGPAPIDPERVPLRPAAAGGLLPRSGSRSALAVEAGGSHAATGRGAGAGPGKPKPGGRTAAALSIQERR---PAGAGRGGETGPGAAASLPPSALGPLG-----------RLCLTLGLWPFTVPLFTVYLAEYSMQSGAWTAIGFPVTDAAARHAFYIYANWCYQAGVFVSRSSGMVWQPGMAALWAMPALQAGLLFFFLHDAVVHWWYGWTLLLPCFLTGLLGGAVYVNAFALLSRSVPPIQREFSMAAASVADSLGIACADVAGVLIQGCLFKINRIPGADYTC 477          
BLAST of EWM22856.1 vs. NCBI_GenBank
Match: gi|633907546|gb|KDD73692.1| (CLN3 protein [Helicosporidium sp. ATCC 50920])

HSP 1 Score: 307.375 bits (786), Expect = 1.960e-96
Identity = 199/481 (41.37%), Postives = 259/481 (53.85%), Query Frame = 0
Query:   16 QAMEKRQNLAAFWALGLLNNVVYVIMLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYWFHHVSYSLRASLCGFLMAASLLTVALGRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDELSSAVDER----DEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNAISPLYSYPSTSLRNEAEGEEEEGRGGEREGEGRGRERKGGRVQKRARTRKGKRSHPHTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQGCLYRANRIPGATFTCG 492
            Q     + L +F+ LG+LNN+ YVIMLAGA  I+A GVGLV+L  + P+  VK SAP+WFH V Y  R + C  LM+AS   VAL RT +  L GV   +LQ G+GEASML L+A+Y GP+ +TAW+SGTG AG+ GYAWV   H L  +SFPATL+ A  L  A+   +F  LGDP   A          E  S  D R     E +      ED  G                             +S  +E   E+      E   EG               + +G+         T RER    L+LWP   PL  V+++EYA+Q+G WSA+GFPV + +AR+ FY  AN  YQ GVF+SRSSG L   SL  LW +P LQ  LL+    NA   +W DW L + CF+ GL GGAVYV  F+ I+R      RE +L +AS+AD +GI L++   +L+QGCL+R + I GA F CG
Sbjct:    8 QTRPSLRVLGSFFLLGMLNNMGYVIMLAGATTISASGVGLVYLCAIVPSLSVKASAPHWFHRVRYGPRMATCAALMSASFCAVALSRTRSAALLGVALGALQGGLGEASMLALSARYGGPAPLTAWASGTGLAGLGGYAWVGLLHDLCGLSFPATLLLANALAAAYAAAYFRGLGDPGKGA---------TESPSPRDARRRFLPEPKESTPRAEDAAG----------------------------PSSAPDERATEQRPLLALETASEG---------------SIRGEAIVSSVRSMTARERLGASLALWPCAAPLFLVFFSEYALQAGTWSAVGFPVSDAEARRRFYVVANALYQAGVFVSRSSGTLWEASLAALWAMPLLQAALLVGLTANAAALWWNDWSLAAPCFLVGLLGGAVYVQAFARIAREAEPHLREFSLAAASLADALGIALADAVAVLIQGCLFRVHGIRGADFGCG 436          
BLAST of EWM22856.1 vs. NCBI_GenBank
Match: gi|1210527731|dbj|GAX13586.1| (battenin [Fistulifera solaris])

HSP 1 Score: 243.432 bits (620), Expect = 5.937e-71
Identity = 182/502 (36.25%), Postives = 246/502 (49.00%), Query Frame = 0
Query:   19 EKRQNLAAFWALGLLNNVVYVIMLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYWFHHVSYSLRASLCGFLMAASLLTVALG-RTLA----------VQLTGVGFCSLQAGIGEASMLG---------LTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDE--LSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNAISPLYSYPSTSLRNEAEGEEEEGRGGEREGEGRGRERKGGRVQKRARTRKGKRSHP-HTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIW----HFWYDWGLLSLCFV-AGLFGGAVYVAGFSLISRHTRDDH-RELALVSASIADTVGIMLSNVAGLLLQGCLYRANRIPGATFTC 491
            + R+  AAF+ LGLLNN  YVIMLA AK ++ GG GLV++A++ P   VKLSAPYWF  V+Y  R S+    MA +        R L           +   GV   SLQ G+GEA++L          + +Q      +TAWSSGTG AG+ GY W V     L      T++AAL+L +       Y L       Y  VL DI+DE  L+S    +D E                        + LL  +AI           R+ A  E E  +  +     RG   +    + RA         P  T+ F     +   LSLWPYTVPL  VY AEYA Q+G W+A+GFP+E+   R  FY  +N  YQ GVF+SRSSG  L  S   LW LP LQ L LLFF + A+      + Y   LL +  +  G+ GGAVYV G+  I    +     E+AL + S+A+ +GI+++++ GL LQGCLY+ + +  A   C
Sbjct:   34 KARKRAAAFFCLGLLNNTSYVIMLAAAKSLSEGGTGLVYIANILPGISVKLSAPYWFDRVTYQSRVSIAAACMAMAFFITGYSERRLQYPHNSDSLTYLPFVGVALVSLQCGLGEATLLAAAGKCDSLCINSQGAKGRCLTAWSSGTGAAGLTGYLWTVAGTHWLDFGVAWTILAALILAV------MYGL------IYITVLGDIDDEKRLTSYALSQDIE----------------------LTNDLLEADAIE----------RSSACSERESIQTSQTSLITRGISIE----EMRATDNLSDSRQPIETNEFETIRPFHFILSLWPYTVPLFLVYAAEYACQAGVWTAMGFPIEDATKRNQFYQTSNWLYQAGVFVSRSSGTFLTLSPTTLWVLPFLQVLNLLFFSVTALQSPQTSWLYSQPLLYITSIWTGILGGAVYVHGYKRILVDFQGTFLTEMALATTSVAEGIGILMADILGLFLQGCLYQVHHLDNALVHC 487          
BLAST of EWM22856.1 vs. NCBI_GenBank
Match: gi|301106222|ref|XP_002902194.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262098814|gb|EEY56866.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 221.09 bits (562), Expect = 1.454e-66
Identity = 105/170 (61.76%), Postives = 131/170 (77.06%), Query Frame = 0
Query:  321 LSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQGCLYRANRIPGATFT 490
            ++L PY VPL TVY AEY MQ+G WSAIGFPV+ ++AR  FY+ A ++YQ GVF+SRSSG+L   + P+L+ +PALQ LLL+FF   A  HFWY+WGLLSLCFVAGL GGAVYV  F+L+SR T   H ELAL +AS+ DTVG+ML++ AGL LQGCLY  N +PGAT +
Sbjct:    1 MTLGPYIVPLTTVYLAEYTMQTGVWSAIGFPVDSKEARASFYSSAGLAYQAGVFISRSSGVLFQATRPILYLMPALQVLLLVFFTFVAATHFWYNWGLLSLCFVAGLLGGAVYVNAFTLLSRETPSSHVELALSAASVGDTVGVMLADCAGLFLQGCLYSINHLPGATIS 170          
BLAST of EWM22856.1 vs. NCBI_GenBank
Match: gi|1210525613|dbj|GAX15682.1| (hypothetical protein FisN_3Hh156 [Fistulifera solaris])

HSP 1 Score: 221.476 bits (563), Expect = 1.566e-62
Identity = 180/501 (35.93%), Postives = 236/501 (47.11%), Query Frame = 0
Query:   30 LGLLNNVVYVIMLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYWFHHVSYSLRASLCGFLMAASLLTVALG-RTLA----------VQLTGVGFCSLQAGIGEASMLG---------------LTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDE--LSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNAISPLYSYPSTSLRNEAEGEEEEGRGGEREG--EGRGRERKGGRVQKRARTRKG---KRSHPHTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDW-----GLLSLCFVAGLFGGAVYVAGFSLISRHTRDDH-RELALVSASIADTVGIMLSNVAGLLLQGCLYRANRIPGATFTC 491
            LGLLNN  YVIMLA AK ++ GG GLV++A++ P   VKLSAPYWF  V+Y  R S+    MA +        R L           +   GV   S Q G+GEA++L                + +Q      +TAWSSGTG AG+ GY W V     L      T+++AL+L +      FYAL       ++ VL DI+DE  L+S    RD E              L D         LL  NAI                  E  G   ERE     +      G  Q+  R        R    T+ F     +   LSLWPYTVPL  VY AEYA Q+G W+A+GFP+E+   R  FY  +N  YQ GVF+SRSSG  L  S   LW LP LQ L LLFF + A+      W      L +     G+ GGAVYV G+  I    +     E+AL + S+A+ +GI+++++ GL LQGCLY+ + +  A   C
Sbjct:   45 LGLLNNTSYVIMLAAAKSLSEGGTGLVYIANILPGISVKLSAPYWFDRVTYQSRVSIAAACMAMAFFITGYSERRLQDSNYSDSMPYLPFVGVALVSFQCGLGEATLLAAAGKCDSLRVSSNQPINSQSAKGRCLTAWSSGTGAAGLTGYLWTVAGTQWLGFGVAWTILSALILAV------FYAL------IFKIVLGDIDDEKYLASYALSRDIE--------------LTD-------ELLLVANAI------------------ERSGASAERESIHTSQASLITMGTAQEEIRATDDLSDSRQQIETNEFETISPFHFILSLWPYTVPLFLVYAAEYACQAGVWTAMGFPIEDSTKRNQFYQTSNWLYQTGVFVSRSSGTFLTLSPTTLWVLPLLQVLNLLFFSVIALQSPQTSWLYNQPLLYATSTWTGILGGAVYVHGYKRILVDFQGTSLTEMALATTSVAEGIGILMADILGLFLQGCLYQVHHLDNALVHC 494          
BLAST of EWM22856.1 vs. NCBI_GenBank
Match: gi|953489509|emb|CEG46875.1| (cln3like protein [Plasmopara halstedii])

HSP 1 Score: 217.624 bits (553), Expect = 3.908e-62
Identity = 103/197 (52.28%), Postives = 138/197 (70.05%), Query Frame = 0
Query:  293 QKRARTRKGKRSHPHT-HVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQGCLYRANRIPGAT 488
            ++  + + G     H   V  I+++    L+L PY +PL TVY+AEY MQ+G WS+IGFPVE+++AR  FY  A ++YQ+GVF+SRSSG+L   + P+L+ +P LQ LLL FF L A+ H WY+WGLL LCFV GL GG VYV  ++L+S+     H ELAL +AS+ DTVG+ML++  GL LQGCLY  NRIPGAT
Sbjct:  204 EELKQIKLGSEELVHDGSVMRIQDKVKFILTLGPYIIPLTTVYFAEYTMQTGVWSSIGFPVEKKEARAEFYTSAGLAYQVGVFISRSSGVLFQATRPILYFMPMLQVLLLGFFTLMAVTHLWYNWGLLILCFVVGLLGGGVYVNAYTLLSKEISSSHMELALAAASVGDTVGVMLADCVGLFLQGCLYSINRIPGAT 400          

HSP 2 Score: 155.606 bits (392), Expect = 6.685e-39
Identity = 84/164 (51.22%), Postives = 110/164 (67.07%), Query Frame = 0
Query:   18 MEKRQNLAAFWALGLLNNVVYVIMLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYWFHHVSYSLRASLCGFLMAASLLTVALGR-TLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGP-STITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPI 179
            +E+ +NL AFW LG +NN+ YVIM+AGA+EI AGGVGLV+  D+ P   VKLS PYWF  VSY  R  +    M  S L VA G+ +L +QL GVGF  LQ+G+ EAS L +++ Y  P   +T WSSGTG AG+ GYAW+  FH+  ++SF  TL  A++ PI
Sbjct:    8 VEQLRNLLAFWVLGFINNIGYVIMIAGAQEIAAGGVGLVYFFDIFPALFVKLSGPYWFQLVSYRQRTIVGASWMILSFLVVANGKHSLWLQLLGVGFSGLQSGMMEASFLAMSSFYASPVRCLTCWSSGTGLAGVGGYAWIALFHIWGNLSFQMTLKLAIIFPI 171          
The following BLAST results are available for this feature:
BLAST of EWM22856.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103500|gb|EWM22856.1|0.000e+0100.00cln3like protein [Nannochloropsis gaditana][more]
gi|585103501|gb|EWM22857.1|0.000e+0100.00cln3like protein [Nannochloropsis gaditana][more]
gi|585103502|gb|EWM22858.1|0.000e+0100.00cln3like protein [Nannochloropsis gaditana][more]
gi|553186322|ref|XP_005854399.1|0.000e+080.13battenin, partial [Nannochloropsis gaditana CCMP52... [more]
gi|760447995|ref|XP_011401066.1|3.237e-11143.87Protein btn-1 [Auxenochlorella protothecoides] >gi... [more]
gi|633907546|gb|KDD73692.1|1.960e-9641.37CLN3 protein [Helicosporidium sp. ATCC 50920][more]
gi|1210527731|dbj|GAX13586.1|5.937e-7136.25battenin [Fistulifera solaris][more]
gi|301106222|ref|XP_002902194.1|1.454e-6661.76conserved hypothetical protein [Phytophthora infes... [more]
gi|1210525613|dbj|GAX15682.1|1.566e-6235.93hypothetical protein FisN_3Hh156 [Fistulifera sola... [more]
gi|953489509|emb|CEG46875.1|3.908e-6252.28cln3like protein [Plasmopara halstedii][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7838rna7838Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications