Naga_100243g3, gene7594 (gene) Nannochloropsis gaditana

Overview
NameNaga_100243g3
Unique Namegene7594
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002474.1:91452..95955 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100243g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:91452..95955 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL057ngnoL057Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL056ngnoL056Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G00110NO13G00110Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna7840rna7840-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna7839rna7839-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna7838rna7838-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna7840rna7840Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna7839rna7839Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna7838rna7838Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna7840

>rna7840-protein ID=rna7840-protein|Name=rna7840|organism=Nannochloropsis gaditana|type=polypeptide|length=425bp
MEHSGRFHHVSYSLRASLCGFLMAASLLTVALGRTLAVQLTGVGFCSLQA
GIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFP
ATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDELSSAVDERDEE
EYGVDEGEDGEGAGLPDFGEGTAASALLSPNAISPLYSYPSTSLRNEAEG
EEEEGRGGEREGEGRGRERKGGRVQKRARTRKGKRSHPHTHVFTIRERWS
LFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMS
YQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGL
LSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSN
VAGLLLQGCLYRANRIPGATFTCGA
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protein sequence of rna7839

>rna7839-protein ID=rna7839-protein|Name=rna7839|organism=Nannochloropsis gaditana|type=polypeptide|length=485bp
MRTWLRGRMGRDGDKQAMEKRQNLAAFWALGLLNNVVYVIMLAGAKEINA
GGVGLVFLADVAPTFLVKLSAPYWFHHVSYSLRASLCGFLMAASLLTVAL
GRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGI
LGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEV
LADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNA
ISPLYSYPSTSLRNEAEGEEEEGRGGEREGEGRGRERKGGRVQKRARTRK
GKRSHPHTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGF
PVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLL
LLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRE
LALVSASIADTVGIMLSNVAGLLLQVISIDEKGRE
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protein sequence of rna7838

>rna7838-protein ID=rna7838-protein|Name=rna7838|organism=Nannochloropsis gaditana|type=polypeptide|length=493bp
MRTWLRGRMGRDGDKQAMEKRQNLAAFWALGLLNNVVYVIMLAGAKEINA
GGVGLVFLADVAPTFLVKLSAPYWFHHVSYSLRASLCGFLMAASLLTVAL
GRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGI
LGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEV
LADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFGEGTAASALLSPNA
ISPLYSYPSTSLRNEAEGEEEEGRGGEREGEGRGRERKGGRVQKRARTRK
GKRSHPHTHVFTIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGF
PVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLL
LLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRE
LALVSASIADTVGIMLSNVAGLLLQGCLYRANRIPGATFTCGA
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Synonyms
Publications