EWM22852.1, cds7815 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22852.1 vs. NCBI_GenBank
Match: gi|585103496|gb|EWM22852.1| (hypothetical protein Naga_100243g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 409.838 bits (1052), Expect = 9.935e-145 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 Query: 1 FKLFEDLANDPKTLTEILTTEDARLCPASATMEGEGVVTLPSVDTTSGIKFYQDWHFMGGKDKEEEAERRQLLAQLGMGDLEKEKQWASVSLFSPYDLAPVILVEEGETYSIVLQGLDRSVDDVVVELVQGLARGGEVIATAKKSAGVGEKEDAPWTLDWTAAGLAAMEEDRRFGSSYFLYAHYKTYPGFFAFSTPFRVLI 201 FKLFEDLANDPKTLTEILTTEDARLCPASATMEGEGVVTLPSVDTTSGIKFYQDWHFMGGKDKEEEAERRQLLAQLGMGDLEKEKQWASVSLFSPYDLAPVILVEEGETYSIVLQGLDRSVDDVVVELVQGLARGGEVIATAKKSAGVGEKEDAPWTLDWTAAGLAAMEEDRRFGSSYFLYAHYKTYPGFFAFSTPFRVLI Sbjct: 1 FKLFEDLANDPKTLTEILTTEDARLCPASATMEGEGVVTLPSVDTTSGIKFYQDWHFMGGKDKEEEAERRQLLAQLGMGDLEKEKQWASVSLFSPYDLAPVILVEEGETYSIVLQGLDRSVDDVVVELVQGLARGGEVIATAKKSAGVGEKEDAPWTLDWTAAGLAAMEEDRRFGSSYFLYAHYKTYPGFFAFSTPFRVLI 201
BLAST of EWM22852.1 vs. NCBI_GenBank
Match: gi|553177540|ref|XP_005852474.1| (hypothetical protein NGA_0689200 [Nannochloropsis gaditana CCMP526] >gi|422296059|gb|EKU23358.1| hypothetical protein NGA_0689200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 407.142 bits (1045), Expect = 8.555e-133 Identity = 199/201 (99.00%), Postives = 199/201 (99.00%), Query Frame = 0 Query: 1 FKLFEDLANDPKTLTEILTTEDARLCPASATMEGEGVVTLPSVDTTSGIKFYQDWHFMGGKDKEEEAERRQLLAQLGMGDLEKEKQWASVSLFSPYDLAPVILVEEGETYSIVLQGLDRSVDDVVVELVQGLARGGEVIATAKKSAGVGEKEDAPWTLDWTAAGLAAMEEDRRFGSSYFLYAHYKTYPGFFAFSTPFRVLI 201 FKLFEDLANDPKTLTEILTTEDARLCPASATMEGEGVVTLPSVDTTSGIKFYQDWHFMGGKDKEEEAERRQLLAQLGMGDLEKEKQWASVSLFSPYDLAPVILVEEGETYSIVLQGLDRSVDDVVVELVQGLARGGEVIATAKKS G GEKEDAPWTLDWTAAGLAAMEEDRRFGSSYFLYAHYKTYPGFFAFSTPFRVLI Sbjct: 865 FKLFEDLANDPKTLTEILTTEDARLCPASATMEGEGVVTLPSVDTTSGIKFYQDWHFMGGKDKEEEAERRQLLAQLGMGDLEKEKQWASVSLFSPYDLAPVILVEEGETYSIVLQGLDRSVDDVVVELVQGLARGGEVIATAKKSPGGGEKEDAPWTLDWTAAGLAAMEEDRRFGSSYFLYAHYKTYPGFFAFSTPFRVLI 1065
BLAST of EWM22852.1 vs. NCBI_GenBank
Match: gi|585099464|gb|EWM20110.1| (hypothetical protein Naga_101752g1 [Nannochloropsis gaditana]) HSP 1 Score: 338.191 bits (866), Expect = 6.087e-117 Identity = 167/170 (98.24%), Postives = 167/170 (98.24%), Query Frame = 0 Query: 32 MEGEGVVTLPSVDTTSGIKFYQDWHFMGGKDKEEEAERRQLLAQLGMGDLEKEKQWASVSLFSPYDLAPVILVEEGETYSIVLQGLDRSVDDVVVELVQGLARGGEVIATAKKSAGVGEKEDAPWTLDWTAAGLAAMEEDRRFGSSYFLYAHYKTYPGFFAFSTPFRVLI 201 MEGEGVVTLPSVDTTSGIKFYQDWHFMGGKDKEEEAERRQLLAQLGMGDLEKEKQWASVSLFSPYDLAPVILVEEGETYSIVLQGLD SVDDVVVELVQGLARGGEVIATAKKS G GEKEDAPWTLDWTAAGLAAMEEDRRFGSSYFLYAHYKTYPGFFAFSTPFRVLI Sbjct: 1 MEGEGVVTLPSVDTTSGIKFYQDWHFMGGKDKEEEAERRQLLAQLGMGDLEKEKQWASVSLFSPYDLAPVILVEEGETYSIVLQGLDTSVDDVVVELVQGLARGGEVIATAKKSPGGGEKEDAPWTLDWTAAGLAAMEEDRRFGSSYFLYAHYKTYPGFFAFSTPFRVLI 170
BLAST of EWM22852.1 vs. NCBI_GenBank
Match: gi|553180544|ref|XP_005853421.1| (hypothetical protein NGA_0438900, partial [Nannochloropsis gaditana CCMP526] >gi|422295641|gb|EKU22940.1| hypothetical protein NGA_0438900, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 58.9214 bits (141), Expect = 9.623e-7 Identity = 42/136 (30.88%), Postives = 64/136 (47.06%), Query Frame = 0 Query: 2 KLFEDLANDPKTLTEILTTEDARLCP-ASATMEGEGVVTLPSVDTTSGIKFYQDWHFMGGKDKEEEAERRQLLAQLGMGDLEKEKQWASVSLFSPYDLAPVILVEEGETYSIVLQGLDRSVDDVVVELVQGLARGG 136 K+FE +A++ ++L + + D R P + + PS+DT GIKFYQ F G L+K W V+L SP+++APV G+ Y+++L+ DVVVEL QG + G Sbjct: 995 KIFEGVASNGESLLDTINKYDERDVPFCDVKVSKPSTLFFPSIDTAQGIKFYQGL-FTGNV-------------------LDKGSLWPDVTLVSPHEVAPVQHAVVGQPYTVLLENFAMK-GDVVVELFQGTEKKG 1109 The following BLAST results are available for this feature:
BLAST of EWM22852.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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