rna7836, rna7836 (mRNA) Nannochloropsis gaditana

Overview
Namerna7836
Unique Namerna7836
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1539
Alignment locationCM002474.1:83104..84082 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100243g1.9375.mrna
Orig protein idgnl|cribi|Naga_100243g1.9375
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002474.1supercontigCM002474.1:83104..84082 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100243g1gene7592Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna7836rna7836-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM22852.1cds7815Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna7836 ID=rna7836|Name=rna7836|organism=Nannochloropsis gaditana|type=mRNA|length=1539bp
ATGGTGGCAGACCCGCCGGCAGCACCACCACCGGCTCCACCTTCAGCGCT
TCCAGCACATGGCGCTCAGAAGGACGAACCGCGGCCGCCAAGCAAGCGGC
GGAATGCAAGCGAACCCAAGCAACGTCCACCACCGCCAACAAGCCTTCCA
AACAACGTCATTGCCACCCTTTCATCCTCGCTCTCGTCGCAGCAACTCAC
GGGCGGGTCTTTAGGCTCCAGTGGGGCAGGCTCGGGGAATACCGTGAGGC
CTGCGGCTTTTATCCGCCAAGGCCAGGGGCATCACCCTCATCTCAACCCC
TCCCATGTTCCGACGCCCATCTCCCAGTCATTGAGGACCCACGATGCCAC
AACCCCTTACACTTCCACAATTCATCCACGTCCTCCTCCTCCTCCTTCTG
TCCCTTCCTCGTATAATACCGCGCCGGGCCCCTCAACCCAGTTTCGCTTC
TACCTGCCCCCGTCGGACGAGCCGGGCATCGGCGATCCCACCGGCTGCGT
ATCTCTATCAAGCCACCGACCATCTGCAAGGGTTGCGGGACAACGAAATG
CTCCCATGGCAGTATTTGCAGACACGAAATCGCCGAAGCGAGCCGCGAAA
GGGAAAAGACCGAGGTCTGGAGCTGGGCAACAAGATGCTGGCACATACCT
ACCACAACCACCCTCGTCGGACATTCAGAGGGGCAGCATGGCTGGTTATC
GGGGAGGGCATCCACTCAGGGAAAGAAACGAGGCACTCGCGGTGCTGCCT
GTGCAACCTTCCACAGTCAACACTTCCATTTACCCCTTGCGAGGTTTCTG
CGACGGAATGCTCCGTCTCCGCGCCGAAAACCGCTTCGACCTGAAGAAAG
CCATCGACTTCTCCGCGCGCGTGGAGGTCCTCTCCTACCCTTATGGCATT
GACGCGGCCTACGGGATCAACCAAGCCCTCCGCAGCATCCTGGTCAGCAA
CCCCGACATGTCCTCCCTTTCCCCCTCCCTCGTCTCCTCCATCAAGGCCT
CCGTGACCGCCGCCTCCTCCTCCTCCCTCCTCTCCGCCGTCCACGTGCGG
GTGCCCCACGGCCCCCCCACGGCCCAGGCCCTCATGTCCACACAGTCCGA
CACCGCCTGCCTACCCCTCTTCCTCCGCCTCGCCCGGGACACGACCGCCT
GCCTCATGGTTTTTCGGGGCAACGACCATGTCAGCGACGTCACCTGTAAT
GCGAGGATGTCCTCCCTCTTCATGTCCACGGAGGAAATTCGTGGCCTCAT
CGGACAGACCGGCTTCGCCTGCTGTGCGTTTTGGAGCCATTTTTTGGACC
CAGTGGACGTGGAAGCCCTCTTGGCGGGGAGCGCGGACCTGGTCCTGGAC
AAGTTCAACCAGGGCCGGAGCTCTTTCGACCGGATCGTGGGGGTGACTAC
CCGGGACGGACGGAAAGGCCGCGCCATGGCCACCCTGGGTTGGCACAGCA
GCGAGGATGTGGTGCAAACCCTCATCCTGCGCCTGATCCCTCTCGGCTTC
CACGACCTCCCAGGGAGCAGGCGGCGGTGGAGGACGTGA
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protein sequence of rna7836

>rna7836-protein ID=rna7836-protein|Name=rna7836|organism=Nannochloropsis gaditana|type=polypeptide|length=201bp
FKLFEDLANDPKTLTEILTTEDARLCPASATMEGEGVVTLPSVDTTSGIK
FYQDWHFMGGKDKEEEAERRQLLAQLGMGDLEKEKQWASVSLFSPYDLAP
VILVEEGETYSIVLQGLDRSVDDVVVELVQGLARGGEVIATAKKSAGVGE
KEDAPWTLDWTAAGLAAMEEDRRFGSSYFLYAHYKTYPGFFAFSTPFRVL
I
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mRNA from alignment at CM002474.1:83104..84082+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna7836 ID=rna7836|Name=rna7836|organism=Nannochloropsis gaditana|type=mRNA|length=979bp|location=Sequence derived from alignment at CM002474.1:83104..84082+ (Nannochloropsis gaditana)
TTCAAGCTATTCGAGGACCTGGCCAATGACCCTAAGACCCTCACGGAAAT
CCTGACGACAGAGGACGCACGTCTGTGCCCTGCGTCGGCTacgatggaag
gggagggcgttgTGACGTTGCCAAGCGTGGATACTACTTCAGGGATCAAA
TTCTATCAGGACTGGCATTTCATGGGCGGTAaggacaaagaagaagaggc
agagcgTCGGCAGCTCCTCGCGCAGTTGGGTATGGGCGATCtagagaagg
agaagcaatGGGCGAGCGTGTCATTGTTTTCTCCTTATGATCTAGCCCCA
GTCatcttggtggaggaaggggagacgtACTCCATAGTTCTCCAAGGTCT
AGACAGGAGCGTAGATGACGTGGTCGTTGAGCTTGTACAGGGTTTGGCTA
GGGGTGGTGAGGTAATCGCAACGGCCAAGAAGTCTGCGGGTgttggagag
aaggaggacgcgccTTGGACTTTGGATTGGACCGCAGCGGGCTTAGCAGC
GATGGAAGAAGATCGACGATTTGGATCCTCGTATTTCTTGTACGCCCACT
ACAAGACTTATCCAGGCTTTTTCGCATTCTCAACGCCTTTCCGGGTTCTC
ATTTAGGTCTTGATCAAATTTGTATGAGAAATGAATTATAATCAGTCAAG
CGCACATTAGAAGCTAAAAAAAATGCGAAGTGGTCGAGCTGGCTAGATTC
ATCTTATAAGCACTTGCCGTGTAATAAGGCACGGGGATTATTCTGAAAAT
GCCTATTCTATAGAAGATAACCCGATAAAAGCTTCCCCAAAGAATTGAAA
AGAGCAGAGCGCTATAGTAGAATTAAATTATGAATATAGAAAGACTGACT
ATATCAAAGCTGATGCAGATTGACTGCGTTTGGTCTTTGTCTACGACTGA
TAAGAAGATCTTGAAGTGAAAAGTATTCAAGCACGCATTTTAAATCATAA
ATTCCTTACCTTGCGTGGTGTAAGCATTT
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Coding sequence (CDS) from alignment at CM002474.1:83104..84082+

>rna7836 ID=rna7836|Name=rna7836|organism=Nannochloropsis gaditana|type=CDS|length=606bp|location=Sequence derived from alignment at CM002474.1:83104..84082+ (Nannochloropsis gaditana)
TTCAAGCTATTCGAGGACCTGGCCAATGACCCTAAGACCCTCACGGAAAT
CCTGACGACAGAGGACGCACGTCTGTGCCCTGCGTCGGCTacgatggaag
gggagggcgttgTGACGTTGCCAAGCGTGGATACTACTTCAGGGATCAAA
TTCTATCAGGACTGGCATTTCATGGGCGGTAaggacaaagaagaagaggc
agagcgTCGGCAGCTCCTCGCGCAGTTGGGTATGGGCGATCtagagaagg
agaagcaatGGGCGAGCGTGTCATTGTTTTCTCCTTATGATCTAGCCCCA
GTCatcttggtggaggaaggggagacgtACTCCATAGTTCTCCAAGGTCT
AGACAGGAGCGTAGATGACGTGGTCGTTGAGCTTGTACAGGGTTTGGCTA
GGGGTGGTGAGGTAATCGCAACGGCCAAGAAGTCTGCGGGTgttggagag
aaggaggacgcgccTTGGACTTTGGATTGGACCGCAGCGGGCTTAGCAGC
GATGGAAGAAGATCGACGATTTGGATCCTCGTATTTCTTGTACGCCCACT
ACAAGACTTATCCAGGCTTTTTCGCATTCTCAACGCCTTTCCGGGTTCTC
ATTTAG
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Synonyms
Publications